RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 IL1R1P14778 569 aa16.5■□□□□ 0.23
VAPB-202ENST00000395802 WDR66Q8TBY9 1149 aa16.5■□□□□ 0.23
VAPB-202ENST00000395802 EDC3Q96F86 508 aaKnown RBP16.5■□□□□ 0.23
VAPB-202ENST00000395802 HELLSQ9NRZ9 838 aa16.5■□□□□ 0.23
VAPB-202ENST00000395802 SLX4Q8IY92 1834 aa16.5■□□□□ 0.23
VAPB-202ENST00000395802 WTIPA6NIX2 430 aaPredicted RBP16.49■□□□□ 0.23
VAPB-202ENST00000395802 C21orf2O43822 256 aa16.49■□□□□ 0.23
VAPB-202ENST00000395802 KLRK1P26718 216 aa16.49■□□□□ 0.23
VAPB-202ENST00000395802 SPTY2D1Q68D10 685 aaPredicted RBP16.49■□□□□ 0.23
VAPB-202ENST00000395802 TDRD7Q8NHU6 1098 aaKnown RBP16.49■□□□□ 0.23
VAPB-202ENST00000395802 ANTXR1Q9H6X2 564 aa16.49■□□□□ 0.23
VAPB-202ENST00000395802 CD209Q9NNX6 404 aa16.49■□□□□ 0.23
VAPB-202ENST00000395802 LRP2BPQ9P2M1 347 aa16.49■□□□□ 0.23
VAPB-202ENST00000395802 LTBP1Q14766 1721 aa16.49■□□□□ 0.23
VAPB-202ENST00000395802 SGSM2O43147 1006 aa16.49■□□□□ 0.23
VAPB-202ENST00000395802 IDH1O75874 414 aaKnown RBP16.49■□□□□ 0.23
VAPB-202ENST00000395802 TXNRD3Q86VQ6 643 aa16.49■□□□□ 0.23
VAPB-202ENST00000395802 PSMD1Q99460 953 aa16.49■□□□□ 0.23
VAPB-202ENST00000395802 AKAP11Q9UKA4 1901 aa16.49■□□□□ 0.23
VAPB-202ENST00000395802 CACNA1SQ13698 1873 aa16.48■□□□□ 0.23
VAPB-202ENST00000395802 UBE3CQ15386 1083 aa16.48■□□□□ 0.23
VAPB-202ENST00000395802 MCMDC2Q4G0Z9 681 aa16.48■□□□□ 0.23
VAPB-202ENST00000395802 PI16Q6UXB8 463 aa16.48■□□□□ 0.23
VAPB-202ENST00000395802 PODNQ7Z5L7 613 aa16.48■□□□□ 0.23
VAPB-202ENST00000395802 TBC1D22AQ8WUA7 517 aa16.48■□□□□ 0.23
VAPB-202ENST00000395802 SALL1Q9NSC2 1324 aa16.48■□□□□ 0.23
VAPB-202ENST00000395802 MCCP23508 829 aa16.47■□□□□ 0.23
VAPB-202ENST00000395802 SLC9C2Q5TAH2 1124 aa16.47■□□□□ 0.23
VAPB-202ENST00000395802 ANO2Q9NQ90 1003 aa16.47■□□□□ 0.23
VAPB-202ENST00000395802 ZNF219Q9P2Y4 722 aaPredicted RBP16.47■□□□□ 0.23
VAPB-202ENST00000395802 ABCF2Q9UG63 623 aa16.47■□□□□ 0.23
VAPB-202ENST00000395802 IQSEC3Q9UPP2 1182 aaPredicted RBP16.47■□□□□ 0.23
VAPB-202ENST00000395802 NMIQ13287 307 aaPredicted RBP16.47■□□□□ 0.23
VAPB-202ENST00000395802 ERICH6Q7L0X2 663 aa16.47■□□□□ 0.23
VAPB-202ENST00000395802 C22orf23Q9BZE7 217 aa16.47■□□□□ 0.23
VAPB-202ENST00000395802 RIMBP2O15034 1052 aa16.46■□□□□ 0.23
VAPB-202ENST00000395802 OLFM4Q6UX06 510 aa16.46■□□□□ 0.23
VAPB-202ENST00000395802 APPBP2Q92624 585 aa16.46■□□□□ 0.23
VAPB-202ENST00000395802 ADD2P35612 726 aa16.45■□□□□ 0.22
VAPB-202ENST00000395802 CHAF1AQ13111 956 aaPredicted RBP16.45■□□□□ 0.22
VAPB-202ENST00000395802 ZMYM1Q5SVZ6 1142 aa16.45■□□□□ 0.22
VAPB-202ENST00000395802 PIH1D3Q9NQM4 214 aaKnown RBP16.45■□□□□ 0.22
VAPB-202ENST00000395802 RAI14Q9P0K7 980 aa16.45■□□□□ 0.22
VAPB-202ENST00000395802 DUOX1Q9NRD9 1551 aa16.45■□□□□ 0.22
VAPB-202ENST00000395802 KIAA2012Q0VF49 1180 aa16.45■□□□□ 0.22
VAPB-202ENST00000395802 FAM227BQ96M60 508 aa16.45■□□□□ 0.22
VAPB-202ENST00000395802 TBC1D32Q96NH3 1257 aa16.45■□□□□ 0.22
VAPB-202ENST00000395802 GPR101Q96P66 508 aaPredicted RBP16.45■□□□□ 0.22
VAPB-202ENST00000395802 MYH13Q9UKX3 1938 aa16.44■□□□□ 0.22
VAPB-202ENST00000395802 SLC51AQ86UW1 340 aa16.44■□□□□ 0.22
VAPB-202ENST00000395802 USP26Q9BXU7 913 aa16.44■□□□□ 0.22
VAPB-202ENST00000395802 BCS1LQ9Y276 419 aa16.44■□□□□ 0.22
VAPB-202ENST00000395802 SUGT1Q9Y2Z0 365 aa16.44■□□□□ 0.22
VAPB-202ENST00000395802 FAM205AQ6ZU69 1335 aa16.44■□□□□ 0.22
VAPB-202ENST00000395802 SNED1Q8TER0 1413 aa16.43■□□□□ 0.22
VAPB-202ENST00000395802 A0A0D9SFI3 127 aa16.43■□□□□ 0.22
VAPB-202ENST00000395802 PPIP5K2O43314 1243 aa16.43■□□□□ 0.22
VAPB-202ENST00000395802 PDE6AP16499 860 aa16.43■□□□□ 0.22
VAPB-202ENST00000395802 RBM25P49756 843 aaKnown RBP16.43■□□□□ 0.22
VAPB-202ENST00000395802 GSTO1P78417 241 aa16.43■□□□□ 0.22
VAPB-202ENST00000395802 SLF2Q8IX21 1173 aa16.43■□□□□ 0.22
VAPB-202ENST00000395802 IPO9Q96P70 1041 aaKnown RBP16.43■□□□□ 0.22
VAPB-202ENST00000395802 KIAA1551Q9HCM1 1747 aa16.43■□□□□ 0.22
VAPB-202ENST00000395802 CCDC171Q6TFL3 1326 aa16.43■□□□□ 0.22
VAPB-202ENST00000395802 LDHBP07195 334 aaKnown RBP16.42■□□□□ 0.22
VAPB-202ENST00000395802 MAGEB6Q8N7X4 407 aa16.42■□□□□ 0.22
VAPB-202ENST00000395802 TAOK3Q9H2K8 898 aa16.42■□□□□ 0.22
VAPB-202ENST00000395802 ZNF532Q9HCE3 1301 aa16.42■□□□□ 0.22
VAPB-202ENST00000395802 NAA16Q6N069 864 aaPredicted RBP16.42■□□□□ 0.22
VAPB-202ENST00000395802 DZIP1Q86YF9 867 aaKnown RBP16.42■□□□□ 0.22
VAPB-202ENST00000395802 CERS3Q8IU89 383 aa16.42■□□□□ 0.22
VAPB-202ENST00000395802 AIDAQ96BJ3 306 aa16.42■□□□□ 0.22
VAPB-202ENST00000395802 COL1A1P02452 1464 aaPredicted RBP16.41■□□□□ 0.22
VAPB-202ENST00000395802 BRCA1P38398 1863 aaKnown RBP16.41■□□□□ 0.22
VAPB-202ENST00000395802 MFSD14BQ5SR56 506 aa16.41■□□□□ 0.22
VAPB-202ENST00000395802 TTLL5Q6EMB2 1281 aa16.41■□□□□ 0.22
VAPB-202ENST00000395802 IL27Q8NEV9 243 aa16.41■□□□□ 0.22
VAPB-202ENST00000395802 FHDC1Q9C0D6 1143 aaPredicted RBP16.41■□□□□ 0.22
VAPB-202ENST00000395802 DOCK2Q92608 1830 aa16.41■□□□□ 0.22
VAPB-202ENST00000395802 MYH7P12883 1935 aa16.41■□□□□ 0.22
VAPB-202ENST00000395802 LDHCP07864 332 aa16.4■□□□□ 0.22
VAPB-202ENST00000395802 GNAT2P19087 354 aa16.4■□□□□ 0.22
VAPB-202ENST00000395802 FKBP1AP62942 108 aaKnown RBP16.4■□□□□ 0.22
VAPB-202ENST00000395802 AOC3Q16853 763 aa16.4■□□□□ 0.22
VAPB-202ENST00000395802 STRIP1Q5VSL9 837 aa16.4■□□□□ 0.22
VAPB-202ENST00000395802 RNF20Q5VTR2 975 aa16.4■□□□□ 0.22
VAPB-202ENST00000395802 LARGE2Q8N3Y3 721 aa16.4■□□□□ 0.22
VAPB-202ENST00000395802 WWC3Q9ULE0 1092 aa16.4■□□□□ 0.22
VAPB-202ENST00000395802 TCRBV5S4A2TA0A5A2 114 aa16.4■□□□□ 0.22
VAPB-202ENST00000395802 SOCS7O14512 581 aa16.4■□□□□ 0.22
VAPB-202ENST00000395802 ECE2O60344 883 aa16.4■□□□□ 0.22
VAPB-202ENST00000395802 ANAPC15P60006 121 aa16.4■□□□□ 0.22
VAPB-202ENST00000395802 GTF2IP78347 998 aa16.4■□□□□ 0.22
VAPB-202ENST00000395802 DOK7Q18PE1 504 aa16.4■□□□□ 0.22
VAPB-202ENST00000395802 OSBP2Q969R2 916 aa16.4■□□□□ 0.22
VAPB-202ENST00000395802 NSUN4Q96CB9 384 aaKnown RBP16.4■□□□□ 0.22
VAPB-202ENST00000395802 DSCC1Q9BVC3 393 aa16.4■□□□□ 0.22
VAPB-202ENST00000395802 LSG1Q9H089 658 aaKnown RBP16.4■□□□□ 0.22
VAPB-202ENST00000395802 MAST3O60307 1309 aa16.4■□□□□ 0.22
VAPB-202ENST00000395802 LTBP3Q9NS15 1303 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms