RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 JAG2Q9Y219 1238 aa22.77■■□□□ 1.24
CXCL12-204ENST00000395793 CA12O43570 354 aa22.76■■□□□ 1.23
CXCL12-204ENST00000395793 CCDC102AQ96A19 550 aa22.76■■□□□ 1.23
CXCL12-204ENST00000395793 HDAC9Q9UKV0 1011 aa22.75■■□□□ 1.23
CXCL12-204ENST00000395793 RIPOR2Q9Y4F9 1068 aa22.75■■□□□ 1.23
CXCL12-204ENST00000395793 MMP14P50281 582 aa22.74■■□□□ 1.23
CXCL12-204ENST00000395793 FKBP1BP68106 108 aa22.74■■□□□ 1.23
CXCL12-204ENST00000395793 USP44Q9H0E7 712 aa22.74■■□□□ 1.23
CXCL12-204ENST00000395793 AOX1Q06278 1338 aa22.74■■□□□ 1.23
CXCL12-204ENST00000395793 F8W031 263 aaPredicted RBP22.73■■□□□ 1.23
CXCL12-204ENST00000395793 UBE2Q2LH0YL09 131 aa22.73■■□□□ 1.23
CXCL12-204ENST00000395793 GYG1P46976 350 aa22.73■■□□□ 1.23
CXCL12-204ENST00000395793 UBE4AQ14139 1066 aa22.73■■□□□ 1.23
CXCL12-204ENST00000395793 ALDH1L2Q3SY69 923 aa22.73■■□□□ 1.23
CXCL12-204ENST00000395793 LRRC24Q50LG9 513 aa22.73■■□□□ 1.23
CXCL12-204ENST00000395793 ABHD8Q96I13 439 aa22.72■■□□□ 1.23
CXCL12-204ENST00000395793 FAM84BQ96KN1 310 aaPredicted RBP22.72■■□□□ 1.23
CXCL12-204ENST00000395793 SSC5DA1L4H1 1573 aa22.72■■□□□ 1.23
CXCL12-204ENST00000395793 CCER2I3L3R5 266 aa22.71■■□□□ 1.23
CXCL12-204ENST00000395793 FKBP1AP62942 108 aaKnown RBP22.71■■□□□ 1.23
CXCL12-204ENST00000395793 APOBEC3FQ8IUX4 373 aaKnown RBP22.71■■□□□ 1.23
CXCL12-204ENST00000395793 MTMR14Q8NCE2 650 aa22.71■■□□□ 1.23
CXCL12-204ENST00000395793 TDRD7Q8NHU6 1098 aaKnown RBP22.71■■□□□ 1.23
CXCL12-204ENST00000395793 KLHDC4Q8TBB5 520 aa22.71■■□□□ 1.23
CXCL12-204ENST00000395793 CSRNP1Q96S65 589 aa22.71■■□□□ 1.23
CXCL12-204ENST00000395793 SMC4Q9NTJ3 1288 aa22.71■■□□□ 1.23
CXCL12-204ENST00000395793 FAM205AQ6ZU69 1335 aa22.71■■□□□ 1.23
CXCL12-204ENST00000395793 DLGAP5Q15398 846 aa22.7■■□□□ 1.22
CXCL12-204ENST00000395793 VGLL2Q8N8G2 317 aa22.7■■□□□ 1.22
CXCL12-204ENST00000395793 MROH5Q6ZUA9 1318 aa22.7■■□□□ 1.22
CXCL12-204ENST00000395793 COL1A1P02452 1464 aaPredicted RBP22.69■■□□□ 1.22
CXCL12-204ENST00000395793 CFAP100Q494V2 611 aa22.69■■□□□ 1.22
CXCL12-204ENST00000395793 RNF186Q9NXI6 227 aa22.69■■□□□ 1.22
CXCL12-204ENST00000395793 FZD1Q9UP38 647 aa22.69■■□□□ 1.22
CXCL12-204ENST00000395793 SPDYE2BA6NHP3 402 aa22.68■■□□□ 1.22
CXCL12-204ENST00000395793 SPDYE6P0CI01 402 aa22.68■■□□□ 1.22
CXCL12-204ENST00000395793 HIBADHP31937 336 aaKnown RBP22.68■■□□□ 1.22
CXCL12-204ENST00000395793 TTLL12Q14166 644 aaPredicted RBP22.68■■□□□ 1.22
CXCL12-204ENST00000395793 PRMT6Q96LA8 375 aaPredicted RBP22.68■■□□□ 1.22
CXCL12-204ENST00000395793 SAGE1Q9NXZ1 904 aa22.68■■□□□ 1.22
CXCL12-204ENST00000395793 CLRN2A0PK11 232 aa22.67■■□□□ 1.22
CXCL12-204ENST00000395793 RFX5P48382 616 aaPredicted RBP22.67■■□□□ 1.22
CXCL12-204ENST00000395793 PRKG1Q13976 671 aa22.67■■□□□ 1.22
CXCL12-204ENST00000395793 TRPA1O75762 1119 aa22.66■■□□□ 1.22
CXCL12-204ENST00000395793 PTPN12Q05209 780 aaKnown RBP22.66■■□□□ 1.22
CXCL12-204ENST00000395793 GRIK5Q16478 980 aa22.66■■□□□ 1.22
CXCL12-204ENST00000395793 METTL24Q5JXM2 366 aa22.66■■□□□ 1.22
CXCL12-204ENST00000395793 MFSD14BQ5SR56 506 aa22.66■■□□□ 1.22
CXCL12-204ENST00000395793 FBXO33Q7Z6M2 555 aa22.66■■□□□ 1.22
CXCL12-204ENST00000395793 DEFB129Q9H1M3 183 aa22.66■■□□□ 1.22
CXCL12-204ENST00000395793 IQSEC3Q9UPP2 1182 aaPredicted RBP22.66■■□□□ 1.22
CXCL12-204ENST00000395793 NF2P35240 595 aa22.65■■□□□ 1.22
CXCL12-204ENST00000395793 MCOLN1Q9GZU1 580 aa22.65■■□□□ 1.22
CXCL12-204ENST00000395793 NOB1Q9ULX3 412 aaKnown RBP22.65■■□□□ 1.22
CXCL12-204ENST00000395793 MYH13Q9UKX3 1938 aa22.65■■□□□ 1.22
CXCL12-204ENST00000395793 OTOFQ9HC10 1997 aa22.64■■□□□ 1.21
CXCL12-204ENST00000395793 PDE8BO95263 885 aa22.64■■□□□ 1.21
CXCL12-204ENST00000395793 LAMB1P07942 1786 aa22.63■■□□□ 1.21
CXCL12-204ENST00000395793 CT47B1P0C2W7 299 aaPredicted RBP22.63■■□□□ 1.21
CXCL12-204ENST00000395793 LDLRAD1Q5T700 205 aa22.63■■□□□ 1.21
CXCL12-204ENST00000395793 TTF2Q9UNY4 1162 aaKnown RBP22.63■■□□□ 1.21
CXCL12-204ENST00000395793 FGFR2P21802 821 aa22.62■■□□□ 1.21
CXCL12-204ENST00000395793 MKRN3Q13064 507 aaKnown RBP22.62■■□□□ 1.21
CXCL12-204ENST00000395793 ARMC9Q7Z3E5 817 aa22.62■■□□□ 1.21
CXCL12-204ENST00000395793 VEZTQ9HBM0 779 aa22.62■■□□□ 1.21
CXCL12-204ENST00000395793 ANGEL1Q9UNK9 670 aaKnown RBP22.62■■□□□ 1.21
CXCL12-204ENST00000395793 RBM5P52756 815 aaKnown RBP eCLIP22.61■■□□□ 1.21
CXCL12-204ENST00000395793 DGKZQ13574 1117 aa22.61■■□□□ 1.21
CXCL12-204ENST00000395793 PPP2R3BQ9Y5P8 575 aa22.61■■□□□ 1.21
CXCL12-204ENST00000395793 EYA2O00167 538 aa22.6■■□□□ 1.21
CXCL12-204ENST00000395793 BCAMP50895 628 aa22.6■■□□□ 1.21
CXCL12-204ENST00000395793 RARSP54136 660 aaKnown RBP22.6■■□□□ 1.21
CXCL12-204ENST00000395793 CHAF1AQ13111 956 aaPredicted RBP22.6■■□□□ 1.21
CXCL12-204ENST00000395793 SPDYE2Q495Y8 402 aa22.6■■□□□ 1.21
CXCL12-204ENST00000395793 NBPF12Q5TAG4 269 aaPredicted RBP22.6■■□□□ 1.21
CXCL12-204ENST00000395793 ATG9AQ7Z3C6 839 aa22.6■■□□□ 1.21
CXCL12-204ENST00000395793 SERPINA10Q9UK55 444 aa22.6■■□□□ 1.21
CXCL12-204ENST00000395793 MYO1BO43795 1136 aa22.59■■□□□ 1.21
CXCL12-204ENST00000395793 UBTFL1P0CB47 393 aaPredicted RBP22.59■■□□□ 1.21
CXCL12-204ENST00000395793 MAP3K11Q16584 847 aa22.59■■□□□ 1.21
CXCL12-204ENST00000395793 REM2Q8IYK8 340 aaPredicted RBP22.59■■□□□ 1.21
CXCL12-204ENST00000395793 TDRD3Q9H7E2 651 aaKnown RBP22.59■■□□□ 1.21
CXCL12-204ENST00000395793 ZNF70Q9UC06 446 aaPredicted RBP22.59■■□□□ 1.21
CXCL12-204ENST00000395793 CRKP46108 304 aa22.58■■□□□ 1.21
CXCL12-204ENST00000395793 RASA3Q14644 834 aa22.58■■□□□ 1.21
CXCL12-204ENST00000395793 PUM3Q15397 648 aaKnown RBP22.58■■□□□ 1.21
CXCL12-204ENST00000395793 VPS37DQ86XT2 251 aa22.58■■□□□ 1.21
CXCL12-204ENST00000395793 CDAN1Q8IWY9 1227 aa22.58■■□□□ 1.21
CXCL12-204ENST00000395793 DZIP1LQ8IYY4 767 aaKnown RBP22.58■■□□□ 1.21
CXCL12-204ENST00000395793 CLMNQ96JQ2 1002 aa22.58■■□□□ 1.21
CXCL12-204ENST00000395793 API5Q9BZZ5 524 aaKnown RBP22.58■■□□□ 1.21
CXCL12-204ENST00000395793 KIF16BQ96L93 1317 aa22.57■■□□□ 1.2
CXCL12-204ENST00000395793 CCDC85CA6NKD9 419 aa22.57■■□□□ 1.2
CXCL12-204ENST00000395793 TM4SF4P48230 202 aa22.57■■□□□ 1.2
CXCL12-204ENST00000395793 CAVIN4Q5BKX8 364 aa22.57■■□□□ 1.2
CXCL12-204ENST00000395793 SPRYD7Q5W111 196 aa22.57■■□□□ 1.2
CXCL12-204ENST00000395793 MEIS3Q99687 375 aa22.57■■□□□ 1.2
CXCL12-204ENST00000395793 LRRFIP2Q9Y608 721 aaKnown RBP22.57■■□□□ 1.2
CXCL12-204ENST00000395793 SIL1Q9H173 461 aa22.56■■□□□ 1.2
CXCL12-204ENST00000395793 TBC1D8O95759 1140 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms