RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 IFIT5Q13325 482 aaKnown RBP26.91■■□□□ 1.9
TRAF4-203ENST00000394925 FANCIQ9NVI1 1328 aa26.9■■□□□ 1.9
TRAF4-203ENST00000394925 C15orf52Q6ZUT6 534 aaKnown RBP26.9■■□□□ 1.9
TRAF4-203ENST00000394925 MTMR14Q8NCE2 650 aa26.9■■□□□ 1.9
TRAF4-203ENST00000394925 ALDH1A1P00352 501 aa26.89■■□□□ 1.9
TRAF4-203ENST00000394925 FOXO4P98177 505 aa26.89■■□□□ 1.9
TRAF4-203ENST00000394925 CFAP100Q494V2 611 aa26.89■■□□□ 1.9
TRAF4-203ENST00000394925 PRPF38BQ5VTL8 546 aaKnown RBP26.89■■□□□ 1.9
TRAF4-203ENST00000394925 ZNF804AQ7Z570 1209 aa26.89■■□□□ 1.9
TRAF4-203ENST00000394925 A0A1B0GUL6 1792 aa26.89■■□□□ 1.89
TRAF4-203ENST00000394925 ECM29Q5VYK3 1845 aa26.88■■□□□ 1.89
TRAF4-203ENST00000394925 CLRN2A0PK11 232 aa26.88■■□□□ 1.89
TRAF4-203ENST00000394925 MANSC4A6NHS7 340 aaPredicted RBP26.88■■□□□ 1.89
TRAF4-203ENST00000394925 PPP1R12BO60237 982 aaPredicted RBP26.88■■□□□ 1.89
TRAF4-203ENST00000394925 VAMP4O75379 141 aa26.88■■□□□ 1.89
TRAF4-203ENST00000394925 CLMNQ96JQ2 1002 aa26.88■■□□□ 1.89
TRAF4-203ENST00000394925 JAG2Q9Y219 1238 aa26.88■■□□□ 1.89
TRAF4-203ENST00000394925 SSC5DA1L4H1 1573 aa26.88■■□□□ 1.89
TRAF4-203ENST00000394925 F6X3S4 739 aa26.87■■□□□ 1.89
TRAF4-203ENST00000394925 MYO1BO43795 1136 aa26.87■■□□□ 1.89
TRAF4-203ENST00000394925 IL1R1P14778 569 aa26.87■■□□□ 1.89
TRAF4-203ENST00000394925 MAP3K11Q16584 847 aa26.87■■□□□ 1.89
TRAF4-203ENST00000394925 VEZTQ9HBM0 779 aa26.87■■□□□ 1.89
TRAF4-203ENST00000394925 SALL2Q9Y467 1007 aaPredicted RBP26.87■■□□□ 1.89
TRAF4-203ENST00000394925 PPP2R3BQ9Y5P8 575 aa26.87■■□□□ 1.89
TRAF4-203ENST00000394925 SPDYE2BA6NHP3 402 aa26.86■■□□□ 1.89
TRAF4-203ENST00000394925 PLIN1O60240 522 aa26.86■■□□□ 1.89
TRAF4-203ENST00000394925 SPDYE6P0CI01 402 aa26.86■■□□□ 1.89
TRAF4-203ENST00000394925 INHBEP58166 350 aa26.86■■□□□ 1.89
TRAF4-203ENST00000394925 IFNL1Q8IU54 200 aa26.86■■□□□ 1.89
TRAF4-203ENST00000394925 WNK4Q96J92 1243 aa26.86■■□□□ 1.89
TRAF4-203ENST00000394925 PRMT6Q96LA8 375 aaPredicted RBP26.86■■□□□ 1.89
TRAF4-203ENST00000394925 PCDH10Q9P2E7 1040 aa26.86■■□□□ 1.89
TRAF4-203ENST00000394925 ZBTB48P10074 688 aaPredicted RBP26.85■■□□□ 1.89
TRAF4-203ENST00000394925 EXOSC9Q06265 439 aaKnown RBP26.85■■□□□ 1.89
TRAF4-203ENST00000394925 BEND3Q5T5X7 828 aa26.85■■□□□ 1.89
TRAF4-203ENST00000394925 LMBR1LQ6UX01 489 aa26.85■■□□□ 1.89
TRAF4-203ENST00000394925 ZNF594Q96JF6 807 aaPredicted RBP26.85■■□□□ 1.89
TRAF4-203ENST00000394925 RBM5P52756 815 aaKnown RBP eCLIP26.84■■□□□ 1.898e-14■■■■□ 26.3
TRAF4-203ENST00000394925 FKBP1AP62942 108 aaKnown RBP26.84■■□□□ 1.89
TRAF4-203ENST00000394925 SUPT20HL1Q3ZLR7 823 aa26.84■■□□□ 1.89
TRAF4-203ENST00000394925 NCBP3Q53F19 620 aaKnown RBP26.84■■□□□ 1.89
TRAF4-203ENST00000394925 TAF7LQ5H9L4 462 aa26.84■■□□□ 1.89
TRAF4-203ENST00000394925 EPHA10Q5JZY3 1008 aa26.84■■□□□ 1.89
TRAF4-203ENST00000394925 NBPF12Q5TAG4 269 aaPredicted RBP26.84■■□□□ 1.89
TRAF4-203ENST00000394925 AOX1Q06278 1338 aa26.84■■□□□ 1.89
TRAF4-203ENST00000394925 IGF2BP3O00425 579 aaKnown RBP eCLIP26.83■■□□□ 1.89
TRAF4-203ENST00000394925 CCDC57Q2TAC2 916 aa26.83■■□□□ 1.89
TRAF4-203ENST00000394925 LDHAL6AQ6ZMR3 332 aa26.83■■□□□ 1.89
TRAF4-203ENST00000394925 CNNM1Q9NRU3 951 aa26.82■■□□□ 1.88
TRAF4-203ENST00000394925 TRIM17Q9Y577 477 aa26.82■■□□□ 1.88
TRAF4-203ENST00000394925 WDR63Q8IWG1 891 aa26.81■■□□□ 1.88
TRAF4-203ENST00000394925 UNCXA6NJT0 531 aa26.8■■□□□ 1.88
TRAF4-203ENST00000394925 USP2O75604 605 aaPredicted RBP26.8■■□□□ 1.88
TRAF4-203ENST00000394925 IREB2P48200 963 aaKnown RBP26.8■■□□□ 1.88
TRAF4-203ENST00000394925 RASA3Q14644 834 aa26.8■■□□□ 1.88
TRAF4-203ENST00000394925 HTTP42858 3142 aa26.8■■□□□ 1.88
TRAF4-203ENST00000394925 GRM8O00222 908 aa26.79■■□□□ 1.88
TRAF4-203ENST00000394925 OTOP1Q7RTM1 612 aa26.79■■□□□ 1.88
TRAF4-203ENST00000394925 GJA5P36382 358 aa26.78■■□□□ 1.88
TRAF4-203ENST00000394925 MRS2Q9HD23 443 aa26.78■■□□□ 1.88
TRAF4-203ENST00000394925 LAMB1P07942 1786 aa26.78■■□□□ 1.88
TRAF4-203ENST00000394925 FAM205AQ6ZU69 1335 aa26.77■■□□□ 1.88
TRAF4-203ENST00000394925 OTUD7BQ6GQQ9 843 aa26.77■■□□□ 1.88
TRAF4-203ENST00000394925 ANKRD13AQ8IZ07 590 aa26.77■■□□□ 1.88
TRAF4-203ENST00000394925 C9orf78Q9NZ63 289 aaPredicted RBP26.77■■□□□ 1.88
TRAF4-203ENST00000394925 MFSD14BQ5SR56 506 aa26.76■■□□□ 1.87
TRAF4-203ENST00000394925 TTF2Q9UNY4 1162 aaKnown RBP26.76■■□□□ 1.87
TRAF4-203ENST00000394925 GYG1P46976 350 aa26.75■■□□□ 1.87
TRAF4-203ENST00000394925 CRHR2Q13324 411 aa26.75■■□□□ 1.87
TRAF4-203ENST00000394925 TDRD7Q8NHU6 1098 aaKnown RBP26.75■■□□□ 1.87
TRAF4-203ENST00000394925 CD99L2Q8TCZ2 262 aa26.75■■□□□ 1.87
TRAF4-203ENST00000394925 ERO1AQ96HE7 468 aa26.75■■□□□ 1.87
TRAF4-203ENST00000394925 TDRD3Q9H7E2 651 aaKnown RBP26.75■■□□□ 1.87
TRAF4-203ENST00000394925 SPINK5Q9NQ38 1064 aaPredicted RBP26.75■■□□□ 1.87
TRAF4-203ENST00000394925 ZNF70Q9UC06 446 aaPredicted RBP26.75■■□□□ 1.87
TRAF4-203ENST00000394925 HIBADHP31937 336 aaKnown RBP26.74■■□□□ 1.87
TRAF4-203ENST00000394925 TNFAIP1Q13829 316 aa26.74■■□□□ 1.87
TRAF4-203ENST00000394925 UBE4AQ14139 1066 aa26.74■■□□□ 1.87
TRAF4-203ENST00000394925 SPDYE2Q495Y8 402 aa26.74■■□□□ 1.87
TRAF4-203ENST00000394925 PTPN18Q99952 460 aa26.74■■□□□ 1.87
TRAF4-203ENST00000394925 ELP3Q9H9T3 547 aa26.74■■□□□ 1.87
TRAF4-203ENST00000394925 CENPFP49454 3210 aa26.74■■□□□ 1.87
TRAF4-203ENST00000394925 SLC4A10Q6U841 1118 aa26.73■■□□□ 1.87
TRAF4-203ENST00000394925 FAM84BQ96KN1 310 aaPredicted RBP26.73■■□□□ 1.87
TRAF4-203ENST00000394925 SERPINA10Q9UK55 444 aa26.73■■□□□ 1.87
TRAF4-203ENST00000394925 OTOFQ9HC10 1997 aa26.72■■□□□ 1.87
TRAF4-203ENST00000394925 INTS3Q68E01 1043 aaKnown RBP26.72■■□□□ 1.87
TRAF4-203ENST00000394925 OPTNQ96CV9 577 aa26.72■■□□□ 1.87
TRAF4-203ENST00000394925 PUS3Q9BZE2 481 aaKnown RBP26.72■■□□□ 1.87
TRAF4-203ENST00000394925 PTPN22Q9Y2R2 807 aa26.72■■□□□ 1.87
TRAF4-203ENST00000394925 KIAA0100Q14667 2235 aaKnown RBP26.71■■□□□ 1.87
TRAF4-203ENST00000394925 MKI67P46013 3256 aaKnown RBP26.71■■□□□ 1.87
TRAF4-203ENST00000394925 POTEFA5A3E0 1075 aa26.71■■□□□ 1.87
TRAF4-203ENST00000394925 ALDH1L1O75891 902 aa26.71■■□□□ 1.87
TRAF4-203ENST00000394925 CDAN1Q8IWY9 1227 aa26.71■■□□□ 1.87
TRAF4-203ENST00000394925 DZIP1LQ8IYY4 767 aaKnown RBP26.71■■□□□ 1.87
TRAF4-203ENST00000394925 SRCIN1Q9C0H9 1055 aa26.71■■□□□ 1.87
TRAF4-203ENST00000394925 TESPA1A2RU30 521 aaPredicted RBP26.7■■□□□ 1.86
TRAF4-203ENST00000394925 TCP10L2B9ZVM9 353 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms