RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 SASH1O94885 1247 aa11.18□□□□□ -0.62
ATG4A-205ENST00000394892 GYG1P46976 350 aa11.18□□□□□ -0.62
ATG4A-205ENST00000394892 GRIK5Q16478 980 aa11.18□□□□□ -0.62
ATG4A-205ENST00000394892 MOB2Q70IA6 237 aa11.18□□□□□ -0.62
ATG4A-205ENST00000394892 FBXW7Q969H0 707 aa11.18□□□□□ -0.62
ATG4A-205ENST00000394892 GBA2Q9HCG7 927 aaPredicted RBP11.18□□□□□ -0.62
ATG4A-205ENST00000394892 CNNM1Q9NRU3 951 aa11.18□□□□□ -0.62
ATG4A-205ENST00000394892 SPEF2Q9C093 1822 aa11.17□□□□□ -0.62
ATG4A-205ENST00000394892 KCNJ4P48050 445 aa11.17□□□□□ -0.62
ATG4A-205ENST00000394892 RGMBQ6NW40 437 aa11.17□□□□□ -0.62
ATG4A-205ENST00000394892 FBXO33Q7Z6M2 555 aa11.17□□□□□ -0.62
ATG4A-205ENST00000394892 TDRD7Q8NHU6 1098 aaKnown RBP11.17□□□□□ -0.62
ATG4A-205ENST00000394892 TRPM7Q96QT4 1865 aa11.17□□□□□ -0.62
ATG4A-205ENST00000394892 PITPNM2Q9BZ72 1349 aa11.16□□□□□ -0.62
ATG4A-205ENST00000394892 MYH3P11055 1940 aa11.16□□□□□ -0.62
ATG4A-205ENST00000394892 CT47B1P0C2W7 299 aaPredicted RBP11.16□□□□□ -0.62
ATG4A-205ENST00000394892 FGFR2P21802 821 aa11.16□□□□□ -0.62
ATG4A-205ENST00000394892 ZNF157P51786 506 aaPredicted RBP11.16□□□□□ -0.62
ATG4A-205ENST00000394892 PTPN12Q05209 780 aaKnown RBP11.16□□□□□ -0.62
ATG4A-205ENST00000394892 UBE4AQ14139 1066 aa11.16□□□□□ -0.62
ATG4A-205ENST00000394892 ATG9AQ7Z3C6 839 aa11.16□□□□□ -0.62
ATG4A-205ENST00000394892 SULF1Q8IWU6 871 aa11.16□□□□□ -0.62
ATG4A-205ENST00000394892 SAGE1Q9NXZ1 904 aa11.16□□□□□ -0.62
ATG4A-205ENST00000394892 PCDH10Q9P2E7 1040 aa11.16□□□□□ -0.62
ATG4A-205ENST00000394892 FAM205AQ6ZU69 1335 aa11.15□□□□□ -0.62
ATG4A-205ENST00000394892 MYO3BQ8WXR4 1341 aa11.15□□□□□ -0.62
ATG4A-205ENST00000394892 BCAR3O75815 825 aa11.15□□□□□ -0.62
ATG4A-205ENST00000394892 TAF7LQ5H9L4 462 aa11.15□□□□□ -0.62
ATG4A-205ENST00000394892 REM2Q8IYK8 340 aaPredicted RBP11.15□□□□□ -0.62
ATG4A-205ENST00000394892 PRMT6Q96LA8 375 aaPredicted RBP11.15□□□□□ -0.62
ATG4A-205ENST00000394892 MEIS3Q99687 375 aa11.15□□□□□ -0.62
ATG4A-205ENST00000394892 CACNA1FO60840 1977 aa11.15□□□□□ -0.62
ATG4A-205ENST00000394892 PSME4Q14997 1843 aa11.14□□□□□ -0.63
ATG4A-205ENST00000394892 F8W031 263 aaPredicted RBP11.14□□□□□ -0.63
ATG4A-205ENST00000394892 UBE2Q2LH0YL09 131 aa11.14□□□□□ -0.63
ATG4A-205ENST00000394892 HIBADHP31937 336 aaKnown RBP11.14□□□□□ -0.63
ATG4A-205ENST00000394892 DIEXFQ68CQ4 756 aaKnown RBP11.14□□□□□ -0.63
ATG4A-205ENST00000394892 ZNF804AQ7Z570 1209 aa11.14□□□□□ -0.63
ATG4A-205ENST00000394892 MTMR14Q8NCE2 650 aa11.14□□□□□ -0.63
ATG4A-205ENST00000394892 FZD1Q9UP38 647 aa11.14□□□□□ -0.63
ATG4A-205ENST00000394892 IQSEC3Q9UPP2 1182 aaPredicted RBP11.14□□□□□ -0.63
ATG4A-205ENST00000394892 MROH5Q6ZUA9 1318 aa11.13□□□□□ -0.63
ATG4A-205ENST00000394892 EYA2O00167 538 aa11.13□□□□□ -0.63
ATG4A-205ENST00000394892 PDE8BO95263 885 aa11.13□□□□□ -0.63
ATG4A-205ENST00000394892 SLC10A3P09131 477 aa11.13□□□□□ -0.63
ATG4A-205ENST00000394892 BCAMP50895 628 aa11.13□□□□□ -0.63
ATG4A-205ENST00000394892 FKBP1AP62942 108 aaKnown RBP11.13□□□□□ -0.63
ATG4A-205ENST00000394892 KIF23Q02241 960 aaPredicted RBP11.13□□□□□ -0.63
ATG4A-205ENST00000394892 CFAP100Q494V2 611 aa11.13□□□□□ -0.63
ATG4A-205ENST00000394892 RASAL3Q86YV0 1011 aa11.13□□□□□ -0.63
ATG4A-205ENST00000394892 OGFOD1Q8N543 542 aa11.13□□□□□ -0.63
ATG4A-205ENST00000394892 PA2G4Q9UQ80 394 aaKnown RBP11.13□□□□□ -0.63
ATG4A-205ENST00000394892 LRRFIP2Q9Y608 721 aaKnown RBP11.13□□□□□ -0.63
ATG4A-205ENST00000394892 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.13□□□□□ -0.63
ATG4A-205ENST00000394892 A0A1B0GUL6 1792 aa11.13□□□□□ -0.63
ATG4A-205ENST00000394892 SSC5DA1L4H1 1573 aa11.12□□□□□ -0.63
ATG4A-205ENST00000394892 CLRN2A0PK11 232 aa11.12□□□□□ -0.63
ATG4A-205ENST00000394892 SPDYE2BA6NHP3 402 aa11.12□□□□□ -0.63
ATG4A-205ENST00000394892 TRPA1O75762 1119 aa11.12□□□□□ -0.63
ATG4A-205ENST00000394892 SPDYE6P0CI01 402 aa11.12□□□□□ -0.63
ATG4A-205ENST00000394892 TRIM27P14373 513 aa11.12□□□□□ -0.63
ATG4A-205ENST00000394892 METTL24Q5JXM2 366 aa11.12□□□□□ -0.63
ATG4A-205ENST00000394892 INTS3Q68E01 1043 aaKnown RBP11.12□□□□□ -0.63
ATG4A-205ENST00000394892 CDAN1Q8IWY9 1227 aa11.12□□□□□ -0.63
ATG4A-205ENST00000394892 CSRNP1Q96S65 589 aa11.12□□□□□ -0.63
ATG4A-205ENST00000394892 API5Q9BZZ5 524 aaKnown RBP11.12□□□□□ -0.63
ATG4A-205ENST00000394892 RNF186Q9NXI6 227 aa11.12□□□□□ -0.63
ATG4A-205ENST00000394892 MMP14P50281 582 aa11.11□□□□□ -0.63
ATG4A-205ENST00000394892 FKBP1BP68106 108 aa11.11□□□□□ -0.63
ATG4A-205ENST00000394892 DLGAP5Q15398 846 aa11.11□□□□□ -0.63
ATG4A-205ENST00000394892 MFSD14BQ5SR56 506 aa11.11□□□□□ -0.63
ATG4A-205ENST00000394892 ARHGAP45Q92619 1136 aa11.11□□□□□ -0.63
ATG4A-205ENST00000394892 DEFB129Q9H1M3 183 aa11.11□□□□□ -0.63
ATG4A-205ENST00000394892 COL1A1P02452 1464 aaPredicted RBP11.11□□□□□ -0.63
ATG4A-205ENST00000394892 UBTFL1P0CB47 393 aaPredicted RBP11.1□□□□□ -0.63
ATG4A-205ENST00000394892 PRKG1Q13976 671 aa11.1□□□□□ -0.63
ATG4A-205ENST00000394892 LDLRAD1Q5T700 205 aa11.1□□□□□ -0.63
ATG4A-205ENST00000394892 CTU1Q7Z7A3 348 aaKnown RBP11.1□□□□□ -0.63
ATG4A-205ENST00000394892 SIL1Q9H173 461 aa11.1□□□□□ -0.63
ATG4A-205ENST00000394892 HDAC9Q9UKV0 1011 aa11.1□□□□□ -0.63
ATG4A-205ENST00000394892 POLR2AP24928 1970 aaKnown RBP11.1□□□□□ -0.63
ATG4A-205ENST00000394892 HNRNPUQ00839 825 aaKnown RBP eCLIP11.09□□□□□ -0.63
ATG4A-205ENST00000394892 CHAF1AQ13111 956 aaPredicted RBP11.09□□□□□ -0.63
ATG4A-205ENST00000394892 PKN2Q16513 984 aaKnown RBP11.09□□□□□ -0.63
ATG4A-205ENST00000394892 SPDYE2Q495Y8 402 aa11.09□□□□□ -0.63
ATG4A-205ENST00000394892 NBPF12Q5TAG4 269 aaPredicted RBP11.09□□□□□ -0.63
ATG4A-205ENST00000394892 TEPSINQ96N21 525 aa11.09□□□□□ -0.63
ATG4A-205ENST00000394892 ZNF70Q9UC06 446 aaPredicted RBP11.09□□□□□ -0.63
ATG4A-205ENST00000394892 TTF2Q9UNY4 1162 aaKnown RBP11.09□□□□□ -0.63
ATG4A-205ENST00000394892 CIAO1O76071 339 aa11.08□□□□□ -0.64
ATG4A-205ENST00000394892 RLBP1P12271 317 aa11.08□□□□□ -0.64
ATG4A-205ENST00000394892 ADORA1P30542 326 aa11.08□□□□□ -0.64
ATG4A-205ENST00000394892 NF2P35240 595 aa11.08□□□□□ -0.64
ATG4A-205ENST00000394892 CRKP46108 304 aa11.08□□□□□ -0.64
ATG4A-205ENST00000394892 SOX10P56693 466 aa11.08□□□□□ -0.64
ATG4A-205ENST00000394892 RASA3Q14644 834 aa11.08□□□□□ -0.64
ATG4A-205ENST00000394892 PUM3Q15397 648 aaKnown RBP11.08□□□□□ -0.64
ATG4A-205ENST00000394892 ATF7IPQ6VMQ6 1270 aa11.08□□□□□ -0.64
ATG4A-205ENST00000394892 APOBEC3FQ8IUX4 373 aaKnown RBP11.08□□□□□ -0.64
ATG4A-205ENST00000394892 DZIP1LQ8IYY4 767 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms