RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 CTAGE5O15320 804 aa21.5■■□□□ 1.03
PCDHA1-202ENST00000394633 CCT2P78371 535 aaKnown RBP21.5■■□□□ 1.03
PCDHA1-202ENST00000394633 SNW1Q13573 536 aaKnown RBP21.5■■□□□ 1.03
PCDHA1-202ENST00000394633 STX1AQ16623 288 aa21.5■■□□□ 1.03
PCDHA1-202ENST00000394633 ATP2B3Q16720 1220 aa21.5■■□□□ 1.03
PCDHA1-202ENST00000394633 ATG9AQ7Z3C6 839 aa21.5■■□□□ 1.03
PCDHA1-202ENST00000394633 PLBD2Q8NHP8 589 aa21.5■■□□□ 1.03
PCDHA1-202ENST00000394633 SALL1Q9NSC2 1324 aa21.5■■□□□ 1.03
PCDHA1-202ENST00000394633 NUP188Q5SRE5 1749 aa21.49■■□□□ 1.03
PCDHA1-202ENST00000394633 NBPF26B4DH59 902 aa21.49■■□□□ 1.03
PCDHA1-202ENST00000394633 GOLGA6L19H0YKK7 550 aa21.49■■□□□ 1.03
PCDHA1-202ENST00000394633 ZMYM1Q5SVZ6 1142 aa21.49■■□□□ 1.03
PCDHA1-202ENST00000394633 NBPF14Q5TI25 921 aa21.49■■□□□ 1.03
PCDHA1-202ENST00000394633 NBPF10Q6P3W6 841 aaKnown RBP21.49■■□□□ 1.03
PCDHA1-202ENST00000394633 NBPF15Q8N660 670 aa21.49■■□□□ 1.03
PCDHA1-202ENST00000394633 NEUROD6Q96NK8 337 aa21.49■■□□□ 1.03
PCDHA1-202ENST00000394633 SLC4A9Q96Q91 983 aa21.49■■□□□ 1.03
PCDHA1-202ENST00000394633 NCOA5Q9HCD5 579 aaKnown RBP21.49■■□□□ 1.03
PCDHA1-202ENST00000394633 THSD7AQ9UPZ6 1657 aa21.49■■□□□ 1.03
PCDHA1-202ENST00000394633 SMTNL1A8MU46 457 aa21.48■■□□□ 1.03
PCDHA1-202ENST00000394633 E7EWF7 191 aa21.48■■□□□ 1.03
PCDHA1-202ENST00000394633 TNNT1P13805 278 aa21.48■■□□□ 1.03
PCDHA1-202ENST00000394633 A1BGP04217 495 aa21.48■■□□□ 1.03
PCDHA1-202ENST00000394633 TIMM10P62072 90 aa21.48■■□□□ 1.03
PCDHA1-202ENST00000394633 CBX1P83916 185 aa21.48■■□□□ 1.03
PCDHA1-202ENST00000394633 ENGASEQ8NFI3 743 aa21.48■■□□□ 1.03
PCDHA1-202ENST00000394633 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.47■■□□□ 1.03
PCDHA1-202ENST00000394633 H7C1W4 665 aa21.47■■□□□ 1.03
PCDHA1-202ENST00000394633 HSPD1P10809 573 aaKnown RBP21.47■■□□□ 1.03
PCDHA1-202ENST00000394633 CCDC73Q6ZRK6 1079 aa21.47■■□□□ 1.03
PCDHA1-202ENST00000394633 ILDR1Q86SU0 546 aaPredicted RBP21.47■■□□□ 1.03
PCDHA1-202ENST00000394633 MRFAP1L1Q96HT8 127 aa21.47■■□□□ 1.03
PCDHA1-202ENST00000394633 SPEF2Q9C093 1822 aa21.47■■□□□ 1.03
PCDHA1-202ENST00000394633 KCNQ2O43526 872 aa21.47■■□□□ 1.03
PCDHA1-202ENST00000394633 PPFIA3O75145 1194 aa21.47■■□□□ 1.03
PCDHA1-202ENST00000394633 ATL3Q6DD88 541 aa21.47■■□□□ 1.03
PCDHA1-202ENST00000394633 ZNF396Q96N95 335 aaPredicted RBP21.47■■□□□ 1.03
PCDHA1-202ENST00000394633 MAST3O60307 1309 aa21.46■■□□□ 1.03
PCDHA1-202ENST00000394633 A0A087WWV3 80 aa21.46■■□□□ 1.03
PCDHA1-202ENST00000394633 PDIA3P30101 505 aaKnown RBP21.46■■□□□ 1.03
PCDHA1-202ENST00000394633 GUCY1B3Q02153 619 aa21.46■■□□□ 1.03
PCDHA1-202ENST00000394633 FAM182BQ5T319 152 aa21.46■■□□□ 1.03
PCDHA1-202ENST00000394633 LRRC8AQ8IWT6 810 aa21.46■■□□□ 1.03
PCDHA1-202ENST00000394633 GJD4Q96KN9 370 aaPredicted RBP21.46■■□□□ 1.03
PCDHA1-202ENST00000394633 GPR108Q9NPR9 543 aa21.46■■□□□ 1.03
PCDHA1-202ENST00000394633 FAM160A1Q05DH4 1040 aa21.45■■□□□ 1.03
PCDHA1-202ENST00000394633 NCBP1Q09161 790 aaKnown RBP21.45■■□□□ 1.03
PCDHA1-202ENST00000394633 ARID5BQ14865 1188 aa21.45■■□□□ 1.03
PCDHA1-202ENST00000394633 DHX40Q8IX18 779 aaKnown RBP21.45■■□□□ 1.03
PCDHA1-202ENST00000394633 DNAJC10Q8IXB1 793 aa21.45■■□□□ 1.03
PCDHA1-202ENST00000394633 TPD52L1Q16890 204 aaPredicted RBP21.45■■□□□ 1.02
PCDHA1-202ENST00000394633 CHST3Q7LGC8 479 aa21.45■■□□□ 1.02
PCDHA1-202ENST00000394633 FSIP1Q8NA03 581 aa21.45■■□□□ 1.02
PCDHA1-202ENST00000394633 ZNF274Q96GC6 653 aaPredicted RBP21.45■■□□□ 1.02
PCDHA1-202ENST00000394633 NAP1L2Q9ULW6 460 aaPredicted RBP21.45■■□□□ 1.02
PCDHA1-202ENST00000394633 KINO60870 393 aaKnown RBP21.44■■□□□ 1.02
PCDHA1-202ENST00000394633 ATRNO75882 1429 aa21.44■■□□□ 1.02
PCDHA1-202ENST00000394633 CARMIL3Q8ND23 1372 aa21.44■■□□□ 1.02
PCDHA1-202ENST00000394633 ZSCAN20P17040 1043 aaPredicted RBP21.44■■□□□ 1.02
PCDHA1-202ENST00000394633 TICAM2Q86XR7 235 aa21.44■■□□□ 1.02
PCDHA1-202ENST00000394633 ME1P48163 572 aa21.43■■□□□ 1.02
PCDHA1-202ENST00000394633 SYCP1Q15431 976 aa21.43■■□□□ 1.02
PCDHA1-202ENST00000394633 ANO10Q9NW15 660 aa21.43■■□□□ 1.02
PCDHA1-202ENST00000394633 PAXBP1Q9Y5B6 917 aa21.43■■□□□ 1.02
PCDHA1-202ENST00000394633 BECN2A8MW95 431 aa21.43■■□□□ 1.02
PCDHA1-202ENST00000394633 M0R2C6 588 aa21.43■■□□□ 1.02
PCDHA1-202ENST00000394633 RNF113AO15541 343 aaKnown RBP21.43■■□□□ 1.02
PCDHA1-202ENST00000394633 IFIT1P09914 478 aaKnown RBP21.43■■□□□ 1.02
PCDHA1-202ENST00000394633 FDPSP14324 419 aaKnown RBP21.43■■□□□ 1.02
PCDHA1-202ENST00000394633 U2AF2P26368 475 aaKnown RBP eCLIP21.43■■□□□ 1.02
PCDHA1-202ENST00000394633 IL15P40933 162 aaPredicted RBP21.43■■□□□ 1.02
PCDHA1-202ENST00000394633 RBM6P78332 1123 aaKnown RBP21.43■■□□□ 1.02
PCDHA1-202ENST00000394633 LRRC24Q50LG9 513 aa21.43■■□□□ 1.02
PCDHA1-202ENST00000394633 PTF1AQ7RTS3 328 aa21.43■■□□□ 1.02
PCDHA1-202ENST00000394633 TTLL5Q6EMB2 1281 aa21.42■■□□□ 1.02
PCDHA1-202ENST00000394633 DDX60Q8IY21 1712 aaKnown RBP21.41■■□□□ 1.02
PCDHA1-202ENST00000394633 USP27XA6NNY8 438 aa21.41■■□□□ 1.02
PCDHA1-202ENST00000394633 NEMFO60524 1076 aa21.41■■□□□ 1.02
PCDHA1-202ENST00000394633 DMTNQ08495 405 aa21.41■■□□□ 1.02
PCDHA1-202ENST00000394633 TTLL7Q6ZT98 887 aa21.41■■□□□ 1.02
PCDHA1-202ENST00000394633 ERCC4Q92889 916 aaPredicted RBP21.41■■□□□ 1.02
PCDHA1-202ENST00000394633 ZNF594Q96JF6 807 aaPredicted RBP21.41■■□□□ 1.02
PCDHA1-202ENST00000394633 CWC25Q9NXE8 425 aaPredicted RBP21.41■■□□□ 1.02
PCDHA1-202ENST00000394633 PCDHA7Q9UN72 937 aa21.41■■□□□ 1.02
PCDHA1-202ENST00000394633 SPDYE4A6NLX3 237 aa21.41■■□□□ 1.02
PCDHA1-202ENST00000394633 FMR1NBQ8N0W7 255 aaPredicted RBP21.41■■□□□ 1.02
PCDHA1-202ENST00000394633 A0A1B0GUL7 405 aa21.4■■□□□ 1.02
PCDHA1-202ENST00000394633 EYA2O00167 538 aa21.4■■□□□ 1.02
PCDHA1-202ENST00000394633 GPHNQ9NQX3 736 aaPredicted RBP21.4■■□□□ 1.02
PCDHA1-202ENST00000394633 CEP135Q66GS9 1140 aa21.4■■□□□ 1.02
PCDHA1-202ENST00000394633 AOPEPQ8N6M6 819 aa21.4■■□□□ 1.02
PCDHA1-202ENST00000394633 CCDC112Q8NEF3 446 aa21.4■■□□□ 1.02
PCDHA1-202ENST00000394633 MRPS27Q92552 414 aaKnown RBP21.4■■□□□ 1.02
PCDHA1-202ENST00000394633 RTEL1Q9NZ71 1219 aa21.4■■□□□ 1.02
PCDHA1-202ENST00000394633 TRPC5Q9UL62 973 aaPredicted RBP21.4■■□□□ 1.02
PCDHA1-202ENST00000394633 EVCP57679 992 aa21.39■■□□□ 1.01
PCDHA1-202ENST00000394633 CCZ1BP86790 482 aa21.39■■□□□ 1.01
PCDHA1-202ENST00000394633 CCZ1P86791 482 aaPredicted RBP21.39■■□□□ 1.01
PCDHA1-202ENST00000394633 UTP14CQ5TAP6 766 aaKnown RBP21.39■■□□□ 1.01
PCDHA1-202ENST00000394633 CEP57L1Q8IYX8 460 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms