RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 RBM8AQ9Y5S9 174 aaKnown RBP24.41■■□□□ 1.5
HDDC3-202ENST00000394272 C10orf71Q711Q0 1435 aa24.4■■□□□ 1.5
HDDC3-202ENST00000394272 UBE3CQ15386 1083 aa24.4■■□□□ 1.5
HDDC3-202ENST00000394272 SLC9C2Q5TAH2 1124 aa24.4■■□□□ 1.5
HDDC3-202ENST00000394272 STYK1Q6J9G0 422 aa24.4■■□□□ 1.5
HDDC3-202ENST00000394272 UPF1Q92900 1129 aaKnown RBP eCLIP24.4■■□□□ 1.5
HDDC3-202ENST00000394272 GGA1Q9UJY5 639 aa24.4■■□□□ 1.5
HDDC3-202ENST00000394272 H0YIN7 160 aa24.39■■□□□ 1.5
HDDC3-202ENST00000394272 M0R2C6 588 aa24.39■■□□□ 1.5
HDDC3-202ENST00000394272 WWC3Q9ULE0 1092 aa24.39■■□□□ 1.5
HDDC3-202ENST00000394272 TCRBV5S4A2TA0A5A2 114 aa24.38■■□□□ 1.49
HDDC3-202ENST00000394272 UFL1O94874 794 aa24.38■■□□□ 1.49
HDDC3-202ENST00000394272 PDE6AP16499 860 aa24.38■■□□□ 1.49
HDDC3-202ENST00000394272 SNX14Q9Y5W7 946 aa24.38■■□□□ 1.49
HDDC3-202ENST00000394272 MAP3K12Q12852 859 aa24.38■■□□□ 1.49
HDDC3-202ENST00000394272 WASHC4Q2M389 1173 aa24.38■■□□□ 1.49
HDDC3-202ENST00000394272 RASEFQ8IZ41 740 aa24.38■■□□□ 1.49
HDDC3-202ENST00000394272 TBC1D16Q8TBP0 767 aa24.38■■□□□ 1.49
HDDC3-202ENST00000394272 PUS7LQ9H0K6 701 aaKnown RBP24.38■■□□□ 1.49
HDDC3-202ENST00000394272 PRPF40BQ6NWY9 871 aaKnown RBP24.37■■□□□ 1.49
HDDC3-202ENST00000394272 ZNF622Q969S3 477 aaKnown RBP eCLIP24.37■■□□□ 1.49
HDDC3-202ENST00000394272 DAXXQ9UER7 740 aaPredicted RBP24.37■■□□□ 1.49
HDDC3-202ENST00000394272 POLLQ9UGP5 575 aa24.37■■□□□ 1.49
HDDC3-202ENST00000394272 SLX4Q8IY92 1834 aa24.37■■□□□ 1.49
HDDC3-202ENST00000394272 DLEC1Q9Y238 1755 aa24.37■■□□□ 1.49
HDDC3-202ENST00000394272 CD2BP2O95400 341 aaKnown RBP24.36■■□□□ 1.49
HDDC3-202ENST00000394272 GPR101Q96P66 508 aaPredicted RBP24.36■■□□□ 1.49
HDDC3-202ENST00000394272 DSCC1Q9BVC3 393 aa24.36■■□□□ 1.49
HDDC3-202ENST00000394272 DUOX1Q9NRD9 1551 aa24.36■■□□□ 1.49
HDDC3-202ENST00000394272 KIF13BQ9NQT8 1826 aa24.36■■□□□ 1.49
HDDC3-202ENST00000394272 ZNF532Q9HCE3 1301 aa24.36■■□□□ 1.49
HDDC3-202ENST00000394272 CREB3L3Q68CJ9 461 aa24.36■■□□□ 1.49
HDDC3-202ENST00000394272 CHRNA5P30532 468 aa24.35■■□□□ 1.49
HDDC3-202ENST00000394272 VPS53Q5VIR6 699 aa24.35■■□□□ 1.49
HDDC3-202ENST00000394272 HSCBQ8IWL3 235 aa24.35■■□□□ 1.49
HDDC3-202ENST00000394272 HSPD1P10809 573 aaKnown RBP24.34■■□□□ 1.49
HDDC3-202ENST00000394272 ZNF804AQ7Z570 1209 aa24.34■■□□□ 1.49
HDDC3-202ENST00000394272 MAGEB6Q8N7X4 407 aa24.34■■□□□ 1.49
HDDC3-202ENST00000394272 TDRD7Q8NHU6 1098 aaKnown RBP24.34■■□□□ 1.49
HDDC3-202ENST00000394272 SLC27A2O14975 620 aa24.34■■□□□ 1.49
HDDC3-202ENST00000394272 FRAT2O75474 233 aaPredicted RBP24.34■■□□□ 1.49
HDDC3-202ENST00000394272 LRP2BPQ9P2M1 347 aa24.34■■□□□ 1.49
HDDC3-202ENST00000394272 U3KPZ7 1027 aaPredicted RBP24.34■■□□□ 1.49
HDDC3-202ENST00000394272 GPAA1O43292 621 aa24.33■■□□□ 1.49
HDDC3-202ENST00000394272 OLFM4Q6UX06 510 aa24.33■■□□□ 1.49
HDDC3-202ENST00000394272 CNKSR1Q969H4 720 aa24.32■■□□□ 1.48
HDDC3-202ENST00000394272 ABCF2Q9UG63 623 aa24.32■■□□□ 1.48
HDDC3-202ENST00000394272 FOXP2O15409 715 aa24.32■■□□□ 1.48
HDDC3-202ENST00000394272 RNF20Q5VTR2 975 aa24.32■■□□□ 1.48
HDDC3-202ENST00000394272 MPNDQ8N594 471 aa24.32■■□□□ 1.48
HDDC3-202ENST00000394272 ST18O60284 1047 aa24.31■■□□□ 1.48
HDDC3-202ENST00000394272 ZBTB7AO95365 584 aa24.31■■□□□ 1.48
HDDC3-202ENST00000394272 ZKSCAN1P17029 563 aaPredicted RBP24.31■■□□□ 1.48
HDDC3-202ENST00000394272 TSGA10IPQ3SY00 556 aa24.31■■□□□ 1.48
HDDC3-202ENST00000394272 MTFR1LQ9H019 292 aa24.31■■□□□ 1.48
HDDC3-202ENST00000394272 CCDC88AQ3V6T2 1871 aa24.31■■□□□ 1.48
HDDC3-202ENST00000394272 C6orf229H3BNL8 230 aa24.3■■□□□ 1.48
HDDC3-202ENST00000394272 IL1R1P14778 569 aa24.3■■□□□ 1.48
HDDC3-202ENST00000394272 NEK4P51957 841 aa24.3■■□□□ 1.48
HDDC3-202ENST00000394272 IL27Q8NEV9 243 aa24.3■■□□□ 1.48
HDDC3-202ENST00000394272 CD209Q9NNX6 404 aa24.3■■□□□ 1.48
HDDC3-202ENST00000394272 TMX4Q9H1E5 349 aaPredicted RBP24.3■■□□□ 1.48
HDDC3-202ENST00000394272 SALL1Q9NSC2 1324 aa24.3■■□□□ 1.48
HDDC3-202ENST00000394272 MAST2Q6P0Q8 1798 aa24.3■■□□□ 1.48
HDDC3-202ENST00000394272 K7ELQ4 463 aaPredicted RBP24.29■■□□□ 1.48
HDDC3-202ENST00000394272 CHAF1AQ13111 956 aaPredicted RBP24.29■■□□□ 1.48
HDDC3-202ENST00000394272 R3HDM1Q15032 1099 aaKnown RBP24.29■■□□□ 1.48
HDDC3-202ENST00000394272 DPP8Q6V1X1 898 aaPredicted RBP24.29■■□□□ 1.48
HDDC3-202ENST00000394272 C7orf43Q8WVR3 580 aa24.29■■□□□ 1.48
HDDC3-202ENST00000394272 TM6SF1Q9BZW5 370 aa24.29■■□□□ 1.48
HDDC3-202ENST00000394272 RAI14Q9P0K7 980 aa24.29■■□□□ 1.48
HDDC3-202ENST00000394272 CHD4Q14839 1912 aa24.29■■□□□ 1.48
HDDC3-202ENST00000394272 ADCK5Q3MIX3 580 aa24.28■■□□□ 1.48
HDDC3-202ENST00000394272 UPF3BQ9BZI7 483 aaKnown RBP24.28■■□□□ 1.48
HDDC3-202ENST00000394272 RPAP1Q9BWH6 1393 aaPredicted RBP24.28■■□□□ 1.48
HDDC3-202ENST00000394272 ZNF384Q8TF68 577 aa24.28■■□□□ 1.48
HDDC3-202ENST00000394272 STRBPQ96SI9 672 aaKnown RBP24.28■■□□□ 1.48
HDDC3-202ENST00000394272 TAF6LQ9Y6J9 622 aa24.28■■□□□ 1.48
HDDC3-202ENST00000394272 SNED1Q8TER0 1413 aa24.27■■□□□ 1.48
HDDC3-202ENST00000394272 CYP21A2P08686 494 aa24.27■■□□□ 1.48
HDDC3-202ENST00000394272 ERICH6Q7L0X2 663 aa24.27■■□□□ 1.48
HDDC3-202ENST00000394272 WDR66Q8TBY9 1149 aa24.27■■□□□ 1.48
HDDC3-202ENST00000394272 AIDAQ96BJ3 306 aa24.27■■□□□ 1.48
HDDC3-202ENST00000394272 ZGPATQ8N5A5 531 aaKnown RBP24.26■■□□□ 1.47
HDDC3-202ENST00000394272 ATF5Q9Y2D1 282 aaPredicted RBP24.26■■□□□ 1.47
HDDC3-202ENST00000394272 KIAA1551Q9HCM1 1747 aa24.26■■□□□ 1.47
HDDC3-202ENST00000394272 IGSF3O75054 1194 aa24.26■■□□□ 1.47
HDDC3-202ENST00000394272 CYP7A1P22680 504 aa24.26■■□□□ 1.47
HDDC3-202ENST00000394272 ADGRA1Q86SQ6 560 aa24.26■■□□□ 1.47
HDDC3-202ENST00000394272 NSUN4Q96CB9 384 aaKnown RBP24.26■■□□□ 1.47
HDDC3-202ENST00000394272 JAKMIP1Q96N16 626 aaKnown RBP24.26■■□□□ 1.47
HDDC3-202ENST00000394272 ZSWIM6Q9HCJ5 1215 aa24.26■■□□□ 1.47
HDDC3-202ENST00000394272 JAG2Q9Y219 1238 aa24.26■■□□□ 1.47
HDDC3-202ENST00000394272 MBD4O95243 580 aa24.25■■□□□ 1.47
HDDC3-202ENST00000394272 CASTP20810 708 aaKnown RBP24.25■■□□□ 1.47
HDDC3-202ENST00000394272 PRDX5P30044 214 aa24.25■■□□□ 1.47
HDDC3-202ENST00000394272 TTC14Q96N46 770 aa24.25■■□□□ 1.47
HDDC3-202ENST00000394272 KCNA3P22001 575 aa24.24■■□□□ 1.47
HDDC3-202ENST00000394272 POLD1P28340 1107 aa24.24■■□□□ 1.47
HDDC3-202ENST00000394272 TMED8Q6PL24 325 aaPredicted RBP24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms