RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 CCDC42Q96M95 316 aa6.4□□□□□ -1.38
GAPVD1-206ENST00000394104 TCEANC2Q96MN5 208 aa6.4□□□□□ -1.38
GAPVD1-206ENST00000394104 VEZTQ9HBM0 779 aa6.4□□□□□ -1.38
GAPVD1-206ENST00000394104 C6orf50Q9HD87 102 aa6.4□□□□□ -1.38
GAPVD1-206ENST00000394104 HMG20BQ9P0W2 317 aa6.4□□□□□ -1.38
GAPVD1-206ENST00000394104 TXNDC9O14530 226 aa6.4□□□□□ -1.39
GAPVD1-206ENST00000394104 LMOD1P29536 600 aaPredicted RBP6.4□□□□□ -1.39
GAPVD1-206ENST00000394104 ERCC6LQ2NKX8 1250 aa6.4□□□□□ -1.39
GAPVD1-206ENST00000394104 AMOTQ4VCS5 1084 aa6.4□□□□□ -1.39
GAPVD1-206ENST00000394104 TTC22Q5TAA0 569 aa6.4□□□□□ -1.39
GAPVD1-206ENST00000394104 LRRC43Q8N309 656 aa6.4□□□□□ -1.39
GAPVD1-206ENST00000394104 BRF1Q92994 677 aa6.4□□□□□ -1.39
GAPVD1-206ENST00000394104 GTF3C6Q969F1 213 aa6.4□□□□□ -1.39
GAPVD1-206ENST00000394104 RRP36Q96EU6 259 aaKnown RBP6.4□□□□□ -1.39
GAPVD1-206ENST00000394104 PPP1R12CQ9BZL4 782 aa6.4□□□□□ -1.39
GAPVD1-206ENST00000394104 DAPK3O43293 454 aa6.4□□□□□ -1.39
GAPVD1-206ENST00000394104 MRPS27Q92552 414 aaKnown RBP6.4□□□□□ -1.39
GAPVD1-206ENST00000394104 JAKMIP2Q96AA8 810 aa6.4□□□□□ -1.39
GAPVD1-206ENST00000394104 TMX3Q96JJ7 454 aa6.4□□□□□ -1.39
GAPVD1-206ENST00000394104 NUF2Q9BZD4 464 aa6.4□□□□□ -1.39
GAPVD1-206ENST00000394104 NKIRAS1Q9NYS0 192 aa6.4□□□□□ -1.39
GAPVD1-206ENST00000394104 PTPRCP08575 1304 aa6.4□□□□□ -1.39
GAPVD1-206ENST00000394104 HMGXB3Q12766 1538 aa6.4□□□□□ -1.39
GAPVD1-206ENST00000394104 ATAD2Q6PL18 1390 aa6.4□□□□□ -1.39
GAPVD1-206ENST00000394104 SPDYE3A6NKU9 549 aa6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 FAM204AQ9H8W3 233 aa6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 MAGEB6P1A0A0J9YX57 407 aa6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 BICDL2A1A5D9 508 aa6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 CCDC152Q4G0S7 254 aa6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 CCDC122Q5T0U0 273 aa6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 UBE3BQ7Z3V4 1068 aa6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 CACNA2D3Q8IZS8 1091 aa6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 MTUS1Q9ULD2 1270 aa6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 FAM170AA1A519 330 aa6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 CCT6AP40227 531 aaKnown RBP6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 DNM1Q05193 864 aaKnown RBP6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 CLUL1Q15846 466 aa6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 INF2Q27J81 1249 aa6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 NBPF8Q3BBV2 869 aa6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 NME9Q86XW9 330 aa6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 DACT3Q96B18 629 aaPredicted RBP6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 HDAC9Q9UKV0 1011 aa6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 ATP5DP30049 168 aa6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 NBPF6Q5VWK0 638 aa6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 NBPF5PQ86XG9 351 aaPredicted RBP6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 WHAMMQ8TF30 809 aa6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 LEO1Q8WVC0 666 aaPredicted RBP6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 NBPF4Q96M43 638 aa6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 VCX3BQ9H321 246 aa6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 DBF4Q9UBU7 674 aaPredicted RBP6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 TNNI2P48788 182 aa6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 TNNC1P63316 161 aa6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 CALCOCO2Q13137 446 aa6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 SDCCAG8Q86SQ7 713 aaPredicted RBP6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 IFNKQ9P0W0 207 aa6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 AFG3L2Q9Y4W6 797 aa6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 EXOC5O00471 708 aa6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 HMGB2P26583 209 aaKnown RBP6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 HDXQ7Z353 690 aa6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 C16orf71Q8IYS4 520 aaPredicted RBP6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 ESR2Q92731 530 aa6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 TBC1D31Q96DN5 1066 aa6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 TRIM6Q9C030 488 aaPredicted RBP6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 DACT1Q9NYF0 836 aa6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 C9orf84Q5VXU9 1444 aa6.39□□□□□ -1.39
GAPVD1-206ENST00000394104 UQCRFS1P1P0C7P4 283 aa6.38□□□□□ -1.39
GAPVD1-206ENST00000394104 VAV2P52735 878 aa6.38□□□□□ -1.39
GAPVD1-206ENST00000394104 FRMD4BQ9Y2L6 1034 aa6.38□□□□□ -1.39
GAPVD1-206ENST00000394104 UTP11Q9Y3A2 253 aaKnown RBP6.38□□□□□ -1.39
GAPVD1-206ENST00000394104 KIAA1107Q9UPP5 1409 aa6.38□□□□□ -1.39
GAPVD1-206ENST00000394104 RXRAP19793 462 aa6.38□□□□□ -1.39
GAPVD1-206ENST00000394104 PPP2R3AQ06190 1150 aa6.38□□□□□ -1.39
GAPVD1-206ENST00000394104 SH2D4BQ5SQS7 431 aa6.38□□□□□ -1.39
GAPVD1-206ENST00000394104 LMNTD2Q8IXW0 634 aa6.38□□□□□ -1.39
GAPVD1-206ENST00000394104 CCDC26Q8TAB7 109 aa6.38□□□□□ -1.39
GAPVD1-206ENST00000394104 AFAP1L1Q8TED9 768 aa6.38□□□□□ -1.39
GAPVD1-206ENST00000394104 ACSBG1Q96GR2 724 aa6.38□□□□□ -1.39
GAPVD1-206ENST00000394104 NGLY1Q96IV0 654 aa6.38□□□□□ -1.39
GAPVD1-206ENST00000394104 CNNM2Q9H8M5 875 aa6.38□□□□□ -1.39
GAPVD1-206ENST00000394104 CLNS1AP54105 237 aaKnown RBP6.38□□□□□ -1.39
GAPVD1-206ENST00000394104 DIXDC1Q155Q3 683 aa6.38□□□□□ -1.39
GAPVD1-206ENST00000394104 KRT79Q5XKE5 535 aa6.38□□□□□ -1.39
GAPVD1-206ENST00000394104 GPR161Q8N6U8 529 aaKnown RBP6.38□□□□□ -1.39
GAPVD1-206ENST00000394104 SWAP70Q9UH65 585 aa6.38□□□□□ -1.39
GAPVD1-206ENST00000394104 BMP15O95972 392 aa6.38□□□□□ -1.39
GAPVD1-206ENST00000394104 ZNF853P0CG23 659 aa6.38□□□□□ -1.39
GAPVD1-206ENST00000394104 WDR44Q5JSH3 913 aa6.38□□□□□ -1.39
GAPVD1-206ENST00000394104 NAA16Q6N069 864 aaPredicted RBP6.38□□□□□ -1.39
GAPVD1-206ENST00000394104 CACYBPQ9HB71 228 aaKnown RBP6.38□□□□□ -1.39
GAPVD1-206ENST00000394104 RBM8AQ9Y5S9 174 aaKnown RBP6.38□□□□□ -1.39
GAPVD1-206ENST00000394104 AQRO60306 1485 aaKnown RBP eCLIP6.38□□□□□ -1.392e-6■■■■■ 28.9
GAPVD1-206ENST00000394104 CFTRP13569 1480 aa6.38□□□□□ -1.39
GAPVD1-206ENST00000394104 BACH1O14867 736 aa6.38□□□□□ -1.39
GAPVD1-206ENST00000394104 RIMBP2O15034 1052 aa6.38□□□□□ -1.39
GAPVD1-206ENST00000394104 SPOPO43791 374 aa6.38□□□□□ -1.39
GAPVD1-206ENST00000394104 TRIM27P14373 513 aa6.38□□□□□ -1.39
GAPVD1-206ENST00000394104 BIRC2Q13490 618 aa6.38□□□□□ -1.39
GAPVD1-206ENST00000394104 UTP14CQ5TAP6 766 aaKnown RBP6.38□□□□□ -1.39
GAPVD1-206ENST00000394104 KIFAP3Q92845 792 aa6.38□□□□□ -1.39
GAPVD1-206ENST00000394104 IFT74Q96LB3 600 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms