RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 AKAP11Q9UKA4 1901 aa23.04■■□□□ 1.28
PDLIM7-205ENST00000393551 FKBP1BP68106 108 aa23.04■■□□□ 1.28
PDLIM7-205ENST00000393551 ZNF804AQ7Z570 1209 aa23.04■■□□□ 1.28
PDLIM7-205ENST00000393551 ABHD8Q96I13 439 aa23.04■■□□□ 1.28
PDLIM7-205ENST00000393551 CSRNP1Q96S65 589 aa23.04■■□□□ 1.28
PDLIM7-205ENST00000393551 JAG2Q9Y219 1238 aa23.04■■□□□ 1.28
PDLIM7-205ENST00000393551 ECM29Q5VYK3 1845 aa23.03■■□□□ 1.28
PDLIM7-205ENST00000393551 UBE2Q2LH0YL09 131 aa23.03■■□□□ 1.28
PDLIM7-205ENST00000393551 USP44Q9H0E7 712 aa23.03■■□□□ 1.28
PDLIM7-205ENST00000393551 HDAC9Q9UKV0 1011 aa23.03■■□□□ 1.28
PDLIM7-205ENST00000393551 AOX1Q06278 1338 aa23.03■■□□□ 1.28
PDLIM7-205ENST00000393551 MTMR14Q8NCE2 650 aa23.02■■□□□ 1.28
PDLIM7-205ENST00000393551 F8W031 263 aaPredicted RBP23.01■■□□□ 1.27
PDLIM7-205ENST00000393551 GYG1P46976 350 aa23.01■■□□□ 1.27
PDLIM7-205ENST00000393551 FKBP1AP62942 108 aaKnown RBP23.01■■□□□ 1.27
PDLIM7-205ENST00000393551 UBE4AQ14139 1066 aa23.01■■□□□ 1.27
PDLIM7-205ENST00000393551 LRRC24Q50LG9 513 aa23.01■■□□□ 1.27
PDLIM7-205ENST00000393551 FAM84BQ96KN1 310 aaPredicted RBP23.01■■□□□ 1.27
PDLIM7-205ENST00000393551 RNF186Q9NXI6 227 aa23.01■■□□□ 1.27
PDLIM7-205ENST00000393551 ALDH1L2Q3SY69 923 aa23■■□□□ 1.27
PDLIM7-205ENST00000393551 TDRD7Q8NHU6 1098 aaKnown RBP23■■□□□ 1.27
PDLIM7-205ENST00000393551 DLGAP5Q15398 846 aa22.99■■□□□ 1.27
PDLIM7-205ENST00000393551 APOBEC3FQ8IUX4 373 aaKnown RBP22.99■■□□□ 1.27
PDLIM7-205ENST00000393551 KLHDC4Q8TBB5 520 aa22.99■■□□□ 1.27
PDLIM7-205ENST00000393551 PRMT6Q96LA8 375 aaPredicted RBP22.99■■□□□ 1.27
PDLIM7-205ENST00000393551 SAGE1Q9NXZ1 904 aa22.99■■□□□ 1.27
PDLIM7-205ENST00000393551 FAM205AQ6ZU69 1335 aa22.99■■□□□ 1.27
PDLIM7-205ENST00000393551 TRPA1O75762 1119 aa22.98■■□□□ 1.27
PDLIM7-205ENST00000393551 CFAP100Q494V2 611 aa22.98■■□□□ 1.27
PDLIM7-205ENST00000393551 VGLL2Q8N8G2 317 aa22.98■■□□□ 1.27
PDLIM7-205ENST00000393551 FZD1Q9UP38 647 aa22.98■■□□□ 1.27
PDLIM7-205ENST00000393551 SPDYE2BA6NHP3 402 aa22.97■■□□□ 1.27
PDLIM7-205ENST00000393551 SPDYE6P0CI01 402 aa22.97■■□□□ 1.27
PDLIM7-205ENST00000393551 HIBADHP31937 336 aaKnown RBP22.97■■□□□ 1.27
PDLIM7-205ENST00000393551 DEFB129Q9H1M3 183 aa22.97■■□□□ 1.27
PDLIM7-205ENST00000393551 MROH5Q6ZUA9 1318 aa22.97■■□□□ 1.27
PDLIM7-205ENST00000393551 ARAP2Q8WZ64 1704 aa22.96■■□□□ 1.27
PDLIM7-205ENST00000393551 CCER2I3L3R5 266 aa22.96■■□□□ 1.27
PDLIM7-205ENST00000393551 PTPN12Q05209 780 aaKnown RBP22.96■■□□□ 1.27
PDLIM7-205ENST00000393551 MCOLN1Q9GZU1 580 aa22.96■■□□□ 1.27
PDLIM7-205ENST00000393551 SMC4Q9NTJ3 1288 aa22.96■■□□□ 1.27
PDLIM7-205ENST00000393551 SSC5DA1L4H1 1573 aa22.96■■□□□ 1.27
PDLIM7-205ENST00000393551 CLRN2A0PK11 232 aa22.95■■□□□ 1.26
PDLIM7-205ENST00000393551 PRKG1Q13976 671 aa22.95■■□□□ 1.26
PDLIM7-205ENST00000393551 TTLL12Q14166 644 aaPredicted RBP22.95■■□□□ 1.26
PDLIM7-205ENST00000393551 FBXO33Q7Z6M2 555 aa22.95■■□□□ 1.26
PDLIM7-205ENST00000393551 COL1A1P02452 1464 aaPredicted RBP22.94■■□□□ 1.26
PDLIM7-205ENST00000393551 RFX5P48382 616 aaPredicted RBP22.94■■□□□ 1.26
PDLIM7-205ENST00000393551 GRIK5Q16478 980 aa22.94■■□□□ 1.26
PDLIM7-205ENST00000393551 MFSD14BQ5SR56 506 aa22.94■■□□□ 1.26
PDLIM7-205ENST00000393551 LDLRAD1Q5T700 205 aa22.94■■□□□ 1.26
PDLIM7-205ENST00000393551 PDE8BO95263 885 aa22.93■■□□□ 1.26
PDLIM7-205ENST00000393551 NF2P35240 595 aa22.93■■□□□ 1.26
PDLIM7-205ENST00000393551 METTL24Q5JXM2 366 aa22.93■■□□□ 1.26
PDLIM7-205ENST00000393551 IQSEC3Q9UPP2 1182 aaPredicted RBP22.93■■□□□ 1.26
PDLIM7-205ENST00000393551 REM2Q8IYK8 340 aaPredicted RBP22.92■■□□□ 1.26
PDLIM7-205ENST00000393551 NOB1Q9ULX3 412 aaKnown RBP22.92■■□□□ 1.26
PDLIM7-205ENST00000393551 MKRN3Q13064 507 aaKnown RBP22.91■■□□□ 1.26
PDLIM7-205ENST00000393551 DGKZQ13574 1117 aa22.91■■□□□ 1.26
PDLIM7-205ENST00000393551 ANGEL1Q9UNK9 670 aaKnown RBP22.91■■□□□ 1.26
PDLIM7-205ENST00000393551 TTF2Q9UNY4 1162 aaKnown RBP22.91■■□□□ 1.26
PDLIM7-205ENST00000393551 CT47B1P0C2W7 299 aaPredicted RBP22.9■■□□□ 1.26
PDLIM7-205ENST00000393551 FGFR2P21802 821 aa22.9■■□□□ 1.26
PDLIM7-205ENST00000393551 RBM5P52756 815 aaKnown RBP eCLIP22.9■■□□□ 1.26
PDLIM7-205ENST00000393551 ARMC9Q7Z3E5 817 aa22.9■■□□□ 1.26
PDLIM7-205ENST00000393551 CCDC85CA6NKD9 419 aa22.89■■□□□ 1.25
PDLIM7-205ENST00000393551 MYO1BO43795 1136 aa22.89■■□□□ 1.25
PDLIM7-205ENST00000393551 TM4SF4P48230 202 aa22.89■■□□□ 1.25
PDLIM7-205ENST00000393551 BCAMP50895 628 aa22.89■■□□□ 1.25
PDLIM7-205ENST00000393551 MAP3K11Q16584 847 aa22.89■■□□□ 1.25
PDLIM7-205ENST00000393551 NBPF12Q5TAG4 269 aaPredicted RBP22.89■■□□□ 1.25
PDLIM7-205ENST00000393551 VEZTQ9HBM0 779 aa22.89■■□□□ 1.25
PDLIM7-205ENST00000393551 SERPINA10Q9UK55 444 aa22.89■■□□□ 1.25
PDLIM7-205ENST00000393551 PPP2R3BQ9Y5P8 575 aa22.89■■□□□ 1.25
PDLIM7-205ENST00000393551 RASA3Q14644 834 aa22.88■■□□□ 1.25
PDLIM7-205ENST00000393551 SPDYE2Q495Y8 402 aa22.88■■□□□ 1.25
PDLIM7-205ENST00000393551 ATG9AQ7Z3C6 839 aa22.88■■□□□ 1.25
PDLIM7-205ENST00000393551 ZNF70Q9UC06 446 aaPredicted RBP22.88■■□□□ 1.25
PDLIM7-205ENST00000393551 EYA2O00167 538 aa22.87■■□□□ 1.25
PDLIM7-205ENST00000393551 RARSP54136 660 aaKnown RBP22.87■■□□□ 1.25
PDLIM7-205ENST00000393551 CDAN1Q8IWY9 1227 aa22.87■■□□□ 1.25
PDLIM7-205ENST00000393551 DZIP1LQ8IYY4 767 aaKnown RBP22.87■■□□□ 1.25
PDLIM7-205ENST00000393551 CLMNQ96JQ2 1002 aa22.87■■□□□ 1.25
PDLIM7-205ENST00000393551 TDRD3Q9H7E2 651 aaKnown RBP22.87■■□□□ 1.25
PDLIM7-205ENST00000393551 LAMB1P07942 1786 aa22.86■■□□□ 1.25
PDLIM7-205ENST00000393551 CRKP46108 304 aa22.86■■□□□ 1.25
PDLIM7-205ENST00000393551 CHAF1AQ13111 956 aaPredicted RBP22.86■■□□□ 1.25
PDLIM7-205ENST00000393551 CAVIN4Q5BKX8 364 aa22.86■■□□□ 1.25
PDLIM7-205ENST00000393551 SPRYD7Q5W111 196 aa22.86■■□□□ 1.25
PDLIM7-205ENST00000393551 VPS37DQ86XT2 251 aa22.86■■□□□ 1.25
PDLIM7-205ENST00000393551 USP2O75604 605 aaPredicted RBP22.85■■□□□ 1.25
PDLIM7-205ENST00000393551 TBC1D8O95759 1140 aa22.85■■□□□ 1.25
PDLIM7-205ENST00000393551 PUM3Q15397 648 aaKnown RBP22.85■■□□□ 1.25
PDLIM7-205ENST00000393551 TEPSINQ96N21 525 aa22.85■■□□□ 1.25
PDLIM7-205ENST00000393551 OTOFQ9HC10 1997 aa22.85■■□□□ 1.25
PDLIM7-205ENST00000393551 KIF16BQ96L93 1317 aa22.84■■□□□ 1.25
PDLIM7-205ENST00000393551 UBTFL1P0CB47 393 aaPredicted RBP22.84■■□□□ 1.25
PDLIM7-205ENST00000393551 SUPT20HL1Q3ZLR7 823 aa22.84■■□□□ 1.25
PDLIM7-205ENST00000393551 R3HDMLQ9H3Y0 253 aa22.84■■□□□ 1.25
PDLIM7-205ENST00000393551 MYH13Q9UKX3 1938 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms