RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 H2AFXP16104 143 aaPredicted RBP16.84■□□□□ 0.29
SFXN3-202ENST00000393459 ETF1P62495 437 aaKnown RBP16.84■□□□□ 0.29
SFXN3-202ENST00000393459 FKBP15Q5T1M5 1219 aa16.84■□□□□ 0.29
SFXN3-202ENST00000393459 UBE3BQ7Z3V4 1068 aa16.84■□□□□ 0.29
SFXN3-202ENST00000393459 SRRTQ9BXP5 876 aaKnown RBP16.84■□□□□ 0.29
SFXN3-202ENST00000393459 FKBP4Q02790 459 aaKnown RBP eCLIP16.83■□□□□ 0.29
SFXN3-202ENST00000393459 IPO4Q8TEX9 1081 aaKnown RBP16.83■□□□□ 0.29
SFXN3-202ENST00000393459 KAZALD1Q96I82 304 aa16.83■□□□□ 0.29
SFXN3-202ENST00000393459 IBSPP21815 317 aaPredicted RBP16.83■□□□□ 0.28
SFXN3-202ENST00000393459 SYCP1Q15431 976 aa16.83■□□□□ 0.28
SFXN3-202ENST00000393459 NBPF6Q5VWK0 638 aa16.83■□□□□ 0.28
SFXN3-202ENST00000393459 KLHL10Q6JEL2 608 aa16.83■□□□□ 0.28
SFXN3-202ENST00000393459 NBPF4Q96M43 638 aa16.83■□□□□ 0.28
SFXN3-202ENST00000393459 KIAA1468Q9P260 1216 aa16.83■□□□□ 0.28
SFXN3-202ENST00000393459 DENND2AQ9ULE3 1009 aa16.83■□□□□ 0.28
SFXN3-202ENST00000393459 GRM8O00222 908 aa16.83■□□□□ 0.28
SFXN3-202ENST00000393459 RBM43Q6ZSC3 357 aaKnown RBP16.83■□□□□ 0.28
SFXN3-202ENST00000393459 ILDR1Q86SU0 546 aaPredicted RBP16.83■□□□□ 0.28
SFXN3-202ENST00000393459 NFATC2IPQ8NCF5 419 aa16.83■□□□□ 0.28
SFXN3-202ENST00000393459 CCDC12Q8WUD4 166 aaPredicted RBP16.83■□□□□ 0.28
SFXN3-202ENST00000393459 ZNF202O95125 648 aa16.82■□□□□ 0.28
SFXN3-202ENST00000393459 HOXC9P31274 260 aa16.82■□□□□ 0.28
SFXN3-202ENST00000393459 SYNE3Q6ZMZ3 975 aa16.82■□□□□ 0.28
SFXN3-202ENST00000393459 GPIHBP1Q8IV16 184 aa16.82■□□□□ 0.28
SFXN3-202ENST00000393459 FANCLQ9NW38 375 aa16.82■□□□□ 0.28
SFXN3-202ENST00000393459 CPLX1O14810 134 aa16.82■□□□□ 0.28
SFXN3-202ENST00000393459 TOP1P11387 765 aaKnown RBP16.82■□□□□ 0.28
SFXN3-202ENST00000393459 WASHC4Q2M389 1173 aa16.82■□□□□ 0.28
SFXN3-202ENST00000393459 TOGARAM2Q6ZUX3 1019 aa16.82■□□□□ 0.28
SFXN3-202ENST00000393459 USP54Q70EL1 1684 aa16.82■□□□□ 0.28
SFXN3-202ENST00000393459 GRAMD1CQ8IYS0 662 aa16.81■□□□□ 0.28
SFXN3-202ENST00000393459 CCDC102AQ96A19 550 aa16.81■□□□□ 0.28
SFXN3-202ENST00000393459 MAP3K5Q99683 1374 aa16.81■□□□□ 0.28
SFXN3-202ENST00000393459 NEMFO60524 1076 aa16.81■□□□□ 0.28
SFXN3-202ENST00000393459 GSDMDP57764 484 aa16.81■□□□□ 0.28
SFXN3-202ENST00000393459 ERC1Q8IUD2 1116 aa16.81■□□□□ 0.28
SFXN3-202ENST00000393459 DHX58Q96C10 678 aa16.81■□□□□ 0.28
SFXN3-202ENST00000393459 FAM193AP78312 1265 aa16.81■□□□□ 0.28
SFXN3-202ENST00000393459 C8orf76Q96K31 380 aa16.81■□□□□ 0.28
SFXN3-202ENST00000393459 MYL10Q9BUA6 226 aa16.81■□□□□ 0.28
SFXN3-202ENST00000393459 PARD6BQ9BYG5 372 aa16.81■□□□□ 0.28
SFXN3-202ENST00000393459 PDE11AQ9HCR9 933 aa16.81■□□□□ 0.28
SFXN3-202ENST00000393459 H3BQF6 201 aa16.8■□□□□ 0.28
SFXN3-202ENST00000393459 CASQ1P31415 396 aa16.8■□□□□ 0.28
SFXN3-202ENST00000393459 STX17P56962 302 aa16.8■□□□□ 0.28
SFXN3-202ENST00000393459 DHX37Q8IY37 1157 aaKnown RBP16.8■□□□□ 0.28
SFXN3-202ENST00000393459 ZNF396Q96N95 335 aaPredicted RBP16.8■□□□□ 0.28
SFXN3-202ENST00000393459 ZSCAN16Q9H4T2 348 aaPredicted RBP16.8■□□□□ 0.28
SFXN3-202ENST00000393459 RCOR1Q9UKL0 485 aa16.8■□□□□ 0.28
SFXN3-202ENST00000393459 MYO1CO00159 1063 aa16.8■□□□□ 0.28
SFXN3-202ENST00000393459 TPM4P67936 248 aa16.8■□□□□ 0.28
SFXN3-202ENST00000393459 SARM1Q6SZW1 724 aa16.8■□□□□ 0.28
SFXN3-202ENST00000393459 TBC1D8O95759 1140 aa16.79■□□□□ 0.28
SFXN3-202ENST00000393459 PPP2R3AQ06190 1150 aa16.79■□□□□ 0.28
SFXN3-202ENST00000393459 ESCO1Q5FWF5 840 aa16.79■□□□□ 0.28
SFXN3-202ENST00000393459 ENGASEQ8NFI3 743 aa16.79■□□□□ 0.28
SFXN3-202ENST00000393459 PHKBQ93100 1093 aa16.79■□□□□ 0.28
SFXN3-202ENST00000393459 ZNF594Q96JF6 807 aaPredicted RBP16.79■□□□□ 0.28
SFXN3-202ENST00000393459 SPTLC2O15270 562 aa16.79■□□□□ 0.28
SFXN3-202ENST00000393459 FMR1NBQ8N0W7 255 aaPredicted RBP16.79■□□□□ 0.28
SFXN3-202ENST00000393459 KDRP35968 1356 aa16.79■□□□□ 0.28
SFXN3-202ENST00000393459 NWD1Q149M9 1564 aa16.79■□□□□ 0.28
SFXN3-202ENST00000393459 IGSF1Q8N6C5 1336 aa16.79■□□□□ 0.28
SFXN3-202ENST00000393459 KIF28PB7ZC32 967 aa16.78■□□□□ 0.28
SFXN3-202ENST00000393459 PFKFB1P16118 471 aa16.78■□□□□ 0.28
SFXN3-202ENST00000393459 CDC25BP30305 580 aa16.78■□□□□ 0.28
SFXN3-202ENST00000393459 PSME1Q06323 249 aa16.78■□□□□ 0.28
SFXN3-202ENST00000393459 ARFGAP3Q9NP61 516 aa16.78■□□□□ 0.28
SFXN3-202ENST00000393459 GOLGA8BA8MQT2 603 aa16.78■□□□□ 0.28
SFXN3-202ENST00000393459 E2F4Q16254 413 aa16.78■□□□□ 0.28
SFXN3-202ENST00000393459 GPATCH11Q8N954 259 aa16.78■□□□□ 0.28
SFXN3-202ENST00000393459 POLD4Q9HCU8 107 aa16.78■□□□□ 0.28
SFXN3-202ENST00000393459 DBF4Q9UBU7 674 aaPredicted RBP16.78■□□□□ 0.28
SFXN3-202ENST00000393459 ADAM21Q9UKJ8 722 aa16.78■□□□□ 0.28
SFXN3-202ENST00000393459 CASP1P29466 404 aa16.78■□□□□ 0.28
SFXN3-202ENST00000393459 SART3Q15020 963 aaKnown RBP16.78■□□□□ 0.28
SFXN3-202ENST00000393459 COPS6Q7L5N1 327 aa16.78■□□□□ 0.28
SFXN3-202ENST00000393459 KLF18A0A0U1RQI7 1052 aa16.77■□□□□ 0.28
SFXN3-202ENST00000393459 CTAGE5O15320 804 aa16.77■□□□□ 0.28
SFXN3-202ENST00000393459 CC2D1AQ6P1N0 951 aaPredicted RBP16.77■□□□□ 0.28
SFXN3-202ENST00000393459 PARP3Q9Y6F1 533 aa16.77■□□□□ 0.28
SFXN3-202ENST00000393459 TADA3O75528 432 aa16.77■□□□□ 0.27
SFXN3-202ENST00000393459 WDHD1O75717 1129 aaPredicted RBP16.77■□□□□ 0.27
SFXN3-202ENST00000393459 ZMYND10O75800 440 aa16.77■□□□□ 0.27
SFXN3-202ENST00000393459 CMTR1Q8N1G2 835 aaKnown RBP16.77■□□□□ 0.27
SFXN3-202ENST00000393459 RASSF4Q9H2L5 321 aa16.77■□□□□ 0.27
SFXN3-202ENST00000393459 PPP2R2CQ9Y2T4 447 aa16.77■□□□□ 0.27
SFXN3-202ENST00000393459 FDPSP14324 419 aaKnown RBP16.76■□□□□ 0.27
SFXN3-202ENST00000393459 PDIA3P30101 505 aaKnown RBP16.76■□□□□ 0.27
SFXN3-202ENST00000393459 TRIM65Q6PJ69 517 aa16.76■□□□□ 0.27
SFXN3-202ENST00000393459 XAGE3Q8WTP9 111 aa16.76■□□□□ 0.27
SFXN3-202ENST00000393459 DRC1Q96MC2 740 aa16.76■□□□□ 0.27
SFXN3-202ENST00000393459 L2HGDHQ9H9P8 463 aa16.76■□□□□ 0.27
SFXN3-202ENST00000393459 INCENPQ9NQS7 918 aa16.76■□□□□ 0.27
SFXN3-202ENST00000393459 CDC27P30260 824 aa16.76■□□□□ 0.27
SFXN3-202ENST00000393459 MRPS25P82663 173 aaKnown RBP16.76■□□□□ 0.27
SFXN3-202ENST00000393459 GPS2Q13227 327 aa16.76■□□□□ 0.27
SFXN3-202ENST00000393459 MCMDC2Q4G0Z9 681 aa16.76■□□□□ 0.27
SFXN3-202ENST00000393459 PI16Q6UXB8 463 aa16.76■□□□□ 0.27
SFXN3-202ENST00000393459 KSR2Q6VAB6 950 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms