RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 KRT3P12035 628 aa16.56■□□□□ 0.24
CCDC50-201ENST00000392455 SELENOSQ9BQE4 189 aa16.56■□□□□ 0.24
CCDC50-201ENST00000392455 TRMT1Q9NXH9 659 aaKnown RBP16.56■□□□□ 0.24
CCDC50-201ENST00000392455 CCDC125Q86Z20 511 aa16.55■□□□□ 0.24
CCDC50-201ENST00000392455 TOP2BQ02880 1626 aa16.55■□□□□ 0.24
CCDC50-201ENST00000392455 ARHGEF11O15085 1522 aa16.55■□□□□ 0.24
CCDC50-201ENST00000392455 CCDC184Q52MB2 194 aa16.55■□□□□ 0.24
CCDC50-201ENST00000392455 STAT6P42226 847 aa16.55■□□□□ 0.24
CCDC50-201ENST00000392455 ZNF165P49910 485 aa16.55■□□□□ 0.24
CCDC50-201ENST00000392455 NME9Q86XW9 330 aa16.55■□□□□ 0.24
CCDC50-201ENST00000392455 KAT14Q9H8E8 782 aa16.55■□□□□ 0.24
CCDC50-201ENST00000392455 HSPA1LP34931 641 aa16.55■□□□□ 0.24
CCDC50-201ENST00000392455 HSPA8P11142 646 aaKnown RBP16.55■□□□□ 0.24
CCDC50-201ENST00000392455 SPATS2Q86XZ4 545 aaKnown RBP16.55■□□□□ 0.24
CCDC50-201ENST00000392455 EVI5LQ96CN4 794 aa16.55■□□□□ 0.24
CCDC50-201ENST00000392455 SDCCAG3Q96C92 435 aa16.55■□□□□ 0.24
CCDC50-201ENST00000392455 ZMYND15Q9H091 742 aa16.55■□□□□ 0.24
CCDC50-201ENST00000392455 NAIPQ13075 1403 aa16.55■□□□□ 0.24
CCDC50-201ENST00000392455 BIN1O00499 593 aa16.54■□□□□ 0.24
CCDC50-201ENST00000392455 RUFY4Q6ZNE9 571 aa16.54■□□□□ 0.24
CCDC50-201ENST00000392455 GJB2P29033 226 aa16.54■□□□□ 0.24
CCDC50-201ENST00000392455 HS1BP3Q53T59 392 aa16.54■□□□□ 0.24
CCDC50-201ENST00000392455 ISM2Q6H9L7 571 aa16.54■□□□□ 0.24
CCDC50-201ENST00000392455 ZBTB3Q9H5J0 574 aa16.54■□□□□ 0.24
CCDC50-201ENST00000392455 CC2D2AQ9P2K1 1620 aa16.54■□□□□ 0.24
CCDC50-201ENST00000392455 UTP11Q9Y3A2 253 aaKnown RBP16.54■□□□□ 0.24
CCDC50-201ENST00000392455 TSPY2A6NKD2 308 aa16.54■□□□□ 0.24
CCDC50-201ENST00000392455 E7EVH7 732 aa16.54■□□□□ 0.24
CCDC50-201ENST00000392455 ADCY5O95622 1261 aa16.54■□□□□ 0.24
CCDC50-201ENST00000392455 RARSP54136 660 aaKnown RBP16.54■□□□□ 0.24
CCDC50-201ENST00000392455 PLCB3Q01970 1234 aa16.54■□□□□ 0.24
CCDC50-201ENST00000392455 RNF8O76064 485 aa16.53■□□□□ 0.24
CCDC50-201ENST00000392455 MMRN2Q9H8L6 949 aa16.53■□□□□ 0.24
CCDC50-201ENST00000392455 CNGA4Q8IV77 575 aa16.53■□□□□ 0.24
CCDC50-201ENST00000392455 NGLY1Q96IV0 654 aa16.53■□□□□ 0.24
CCDC50-201ENST00000392455 PALM3A6NDB9 673 aaPredicted RBP16.53■□□□□ 0.24
CCDC50-201ENST00000392455 PTPRCP08575 1304 aa16.53■□□□□ 0.24
CCDC50-201ENST00000392455 NAA16Q6N069 864 aaPredicted RBP16.53■□□□□ 0.24
CCDC50-201ENST00000392455 MFSD6Q6ZSS7 791 aa16.53■□□□□ 0.24
CCDC50-201ENST00000392455 UBL4BQ8N7F7 174 aa16.53■□□□□ 0.24
CCDC50-201ENST00000392455 SMARCC2Q8TAQ2 1214 aa16.53■□□□□ 0.24
CCDC50-201ENST00000392455 C6orf50Q9HD87 102 aa16.53■□□□□ 0.24
CCDC50-201ENST00000392455 HS2ST1Q7LGA3 356 aa16.53■□□□□ 0.24
CCDC50-201ENST00000392455 DBF4Q9UBU7 674 aaPredicted RBP16.53■□□□□ 0.24
CCDC50-201ENST00000392455 EEF2P13639 858 aaKnown RBP16.53■□□□□ 0.24
CCDC50-201ENST00000392455 RPL13P26373 211 aaKnown RBP16.53■□□□□ 0.24
CCDC50-201ENST00000392455 CNNM2Q9H8M5 875 aa16.53■□□□□ 0.24
CCDC50-201ENST00000392455 ANKFY1Q9P2R3 1169 aa16.52■□□□□ 0.24
CCDC50-201ENST00000392455 ZBTB24O43167 697 aaPredicted RBP16.52■□□□□ 0.24
CCDC50-201ENST00000392455 CALML3P27482 149 aa16.52■□□□□ 0.24
CCDC50-201ENST00000392455 CDC5LQ99459 802 aaKnown RBP16.52■□□□□ 0.24
CCDC50-201ENST00000392455 POLE3Q9NRF9 147 aa16.52■□□□□ 0.24
CCDC50-201ENST00000392455 PHLDB3Q6NSJ2 640 aa16.52■□□□□ 0.24
CCDC50-201ENST00000392455 CALM1P0DP23 149 aa16.52■□□□□ 0.24
CCDC50-201ENST00000392455 CALM2P0DP24 149 aa16.52■□□□□ 0.24
CCDC50-201ENST00000392455 CALM3P0DP25 149 aa16.52■□□□□ 0.24
CCDC50-201ENST00000392455 HAND2P61296 217 aa16.52■□□□□ 0.24
CCDC50-201ENST00000392455 CAMSAP2Q08AD1 1489 aa16.52■□□□□ 0.24
CCDC50-201ENST00000392455 PCF11O94913 1555 aaKnown RBP16.52■□□□□ 0.24
CCDC50-201ENST00000392455 EXOC5O00471 708 aa16.52■□□□□ 0.23
CCDC50-201ENST00000392455 ABCC11Q96J66 1382 aa16.52■□□□□ 0.23
CCDC50-201ENST00000392455 RAD50Q92878 1312 aa16.52■□□□□ 0.23
CCDC50-201ENST00000392455 PFDN6O15212 129 aa16.52■□□□□ 0.23
CCDC50-201ENST00000392455 METAP2P50579 478 aaKnown RBP eCLIP16.52■□□□□ 0.23
CCDC50-201ENST00000392455 TRIM14Q14142 442 aa16.52■□□□□ 0.23
CCDC50-201ENST00000392455 NEK11Q8NG66 645 aa16.52■□□□□ 0.23
CCDC50-201ENST00000392455 MICU3Q86XE3 530 aa16.51■□□□□ 0.23
CCDC50-201ENST00000392455 GBP5Q96PP8 586 aa16.51■□□□□ 0.23
CCDC50-201ENST00000392455 FAM13AO94988 1023 aa16.51■□□□□ 0.23
CCDC50-201ENST00000392455 IDEP14735 1019 aa16.51■□□□□ 0.23
CCDC50-201ENST00000392455 NSMCE1Q8WV22 266 aa16.51■□□□□ 0.23
CCDC50-201ENST00000392455 ZNF622Q969S3 477 aaKnown RBP eCLIP16.51■□□□□ 0.235e-7■■□□□ 12.1
CCDC50-201ENST00000392455 CA8P35219 290 aa16.51■□□□□ 0.23
CCDC50-201ENST00000392455 CCT6AP40227 531 aaKnown RBP16.51■□□□□ 0.23
CCDC50-201ENST00000392455 IQGAP2Q13576 1575 aa16.51■□□□□ 0.23
CCDC50-201ENST00000392455 SYKP43405 635 aa16.51■□□□□ 0.23
CCDC50-201ENST00000392455 TERF1P54274 439 aa16.51■□□□□ 0.23
CCDC50-201ENST00000392455 SLC26A6Q9BXS9 759 aa16.51■□□□□ 0.23
CCDC50-201ENST00000392455 KRT23Q9C075 422 aa16.51■□□□□ 0.23
CCDC50-201ENST00000392455 IARSP41252 1262 aaKnown RBP16.51■□□□□ 0.23
CCDC50-201ENST00000392455 PPP2R5EQ16537 467 aa16.51■□□□□ 0.23
CCDC50-201ENST00000392455 KIFC2Q96AC6 838 aa16.51■□□□□ 0.23
CCDC50-201ENST00000392455 NAP1L4Q99733 375 aaKnown RBP16.51■□□□□ 0.23
CCDC50-201ENST00000392455 PANK2Q9BZ23 570 aa16.51■□□□□ 0.23
CCDC50-201ENST00000392455 SSFA2P28290 1259 aa16.51■□□□□ 0.23
CCDC50-201ENST00000392455 GOLGA8CPA6NN73 597 aa16.5■□□□□ 0.23
CCDC50-201ENST00000392455 ATP5J2-PTCD1G3V325 749 aa16.5■□□□□ 0.23
CCDC50-201ENST00000392455 FOXO3O43524 673 aa16.5■□□□□ 0.23
CCDC50-201ENST00000392455 CCDC42Q96M95 316 aa16.5■□□□□ 0.23
CCDC50-201ENST00000392455 KCNK9Q9NPC2 374 aa16.5■□□□□ 0.23
CCDC50-201ENST00000392455 BAG5Q9UL15 447 aa16.5■□□□□ 0.23
CCDC50-201ENST00000392455 USP16Q9Y5T5 823 aa16.5■□□□□ 0.23
CCDC50-201ENST00000392455 ATP2C2O75185 946 aa16.5■□□□□ 0.23
CCDC50-201ENST00000392455 ST5P78524 1137 aa16.5■□□□□ 0.23
CCDC50-201ENST00000392455 RUFY3Q7L099 469 aa16.5■□□□□ 0.23
CCDC50-201ENST00000392455 ERCC3P19447 782 aa16.5■□□□□ 0.23
CCDC50-201ENST00000392455 PLCB4Q15147 1175 aa16.5■□□□□ 0.23
CCDC50-201ENST00000392455 GIMAP4Q9NUV9 329 aa16.5■□□□□ 0.23
CCDC50-201ENST00000392455 STX10O60499 249 aa16.5■□□□□ 0.23
CCDC50-201ENST00000392455 RFC4P35249 363 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms