RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 LINC01387J3KSC0 135 aa7.39□□□□□ -1.23
SNORA40.2-201ENST00000390847 GNB5O14775 395 aa7.39□□□□□ -1.23
SNORA40.2-201ENST00000390847 NID1P14543 1247 aa7.39□□□□□ -1.23
SNORA40.2-201ENST00000390847 ITPKAP23677 461 aa7.39□□□□□ -1.23
SNORA40.2-201ENST00000390847 CRELD1Q96HD1 420 aa7.39□□□□□ -1.23
SNORA40.2-201ENST00000390847 CLEC4MQ9H2X3 399 aaPredicted RBP7.39□□□□□ -1.23
SNORA40.2-201ENST00000390847 ZFYVE1Q9HBF4 777 aa7.39□□□□□ -1.23
SNORA40.2-201ENST00000390847 FAM181BA6NEQ2 426 aa7.38□□□□□ -1.23
SNORA40.2-201ENST00000390847 H3BRJ5 948 aa7.38□□□□□ -1.23
SNORA40.2-201ENST00000390847 BAG6P46379 1132 aa7.38□□□□□ -1.23
SNORA40.2-201ENST00000390847 PTPN12Q05209 780 aaKnown RBP7.38□□□□□ -1.23
SNORA40.2-201ENST00000390847 PCDH1Q08174 1060 aa7.38□□□□□ -1.23
SNORA40.2-201ENST00000390847 IKBKEQ14164 716 aa7.38□□□□□ -1.23
SNORA40.2-201ENST00000390847 MRPL58Q14197 206 aaKnown RBP7.38□□□□□ -1.23
SNORA40.2-201ENST00000390847 TSNAXIP1Q2TAA8 658 aa7.38□□□□□ -1.23
SNORA40.2-201ENST00000390847 LINC00114Q6XXX2 140 aa7.38□□□□□ -1.23
SNORA40.2-201ENST00000390847 VN1R5Q7Z5H4 357 aa7.38□□□□□ -1.23
SNORA40.2-201ENST00000390847 BEND7Q8N7W2 519 aaPredicted RBP7.38□□□□□ -1.23
SNORA40.2-201ENST00000390847 SLC7A3Q8WY07 619 aa7.38□□□□□ -1.23
SNORA40.2-201ENST00000390847 PLVAPQ9BX97 442 aa7.38□□□□□ -1.23
SNORA40.2-201ENST00000390847 ZNF576Q9H609 170 aa7.38□□□□□ -1.23
SNORA40.2-201ENST00000390847 TTF2Q9UNY4 1162 aaKnown RBP7.38□□□□□ -1.23
SNORA40.2-201ENST00000390847 CNTNAP5Q8WYK1 1306 aa7.37□□□□□ -1.23
SNORA40.2-201ENST00000390847 SPDYE3A6NKU9 549 aa7.37□□□□□ -1.23
SNORA40.2-201ENST00000390847 E9PSI1 815 aa7.37□□□□□ -1.23
SNORA40.2-201ENST00000390847 COL9A3Q14050 684 aaPredicted RBP7.37□□□□□ -1.23
SNORA40.2-201ENST00000390847 NPM2Q86SE8 214 aaKnown RBP7.37□□□□□ -1.23
SNORA40.2-201ENST00000390847 C3orf58Q8NDZ4 430 aa7.37□□□□□ -1.23
SNORA40.2-201ENST00000390847 TRIM11Q96F44 468 aa7.37□□□□□ -1.23
SNORA40.2-201ENST00000390847 CARD10Q9BWT7 1032 aa7.37□□□□□ -1.23
SNORA40.2-201ENST00000390847 KIAA1522Q9P206 1035 aaPredicted RBP7.37□□□□□ -1.23
SNORA40.2-201ENST00000390847 GPN3Q9UHW5 284 aaPredicted RBP7.37□□□□□ -1.23
SNORA40.2-201ENST00000390847 FBXO24O75426 580 aa7.36□□□□□ -1.23
SNORA40.2-201ENST00000390847 CTSHP09668 335 aa7.36□□□□□ -1.23
SNORA40.2-201ENST00000390847 ARL4DP49703 201 aa7.36□□□□□ -1.23
SNORA40.2-201ENST00000390847 ZNF157P51786 506 aaPredicted RBP7.36□□□□□ -1.23
SNORA40.2-201ENST00000390847 RAC1P63000 192 aa7.36□□□□□ -1.23
SNORA40.2-201ENST00000390847 RPS26P11Q5JNZ5 115 aaPredicted RBP7.36□□□□□ -1.23
SNORA40.2-201ENST00000390847 MEI1Q5TIA1 1274 aa7.36□□□□□ -1.23
SNORA40.2-201ENST00000390847 TPTE2Q6XPS3 522 aa7.36□□□□□ -1.23
SNORA40.2-201ENST00000390847 TMEM87AQ8NBN3 555 aa7.36□□□□□ -1.23
SNORA40.2-201ENST00000390847 BACH2Q9BYV9 841 aa7.36□□□□□ -1.23
SNORA40.2-201ENST00000390847 PPM1HQ9ULR3 514 aa7.36□□□□□ -1.23
SNORA40.2-201ENST00000390847 FSCN2O14926 492 aa7.35□□□□□ -1.23
SNORA40.2-201ENST00000390847 ESRRAP11474 423 aaPredicted RBP7.35□□□□□ -1.23
SNORA40.2-201ENST00000390847 PIP4K2BP78356 416 aa7.35□□□□□ -1.23
SNORA40.2-201ENST00000390847 SCARF2Q96GP6 870 aaPredicted RBP7.35□□□□□ -1.23
SNORA40.2-201ENST00000390847 SEC31BQ9NQW1 1179 aa7.35□□□□□ -1.23
SNORA40.2-201ENST00000390847 NOP53Q9NZM5 478 aaKnown RBP7.35□□□□□ -1.23
SNORA40.2-201ENST00000390847 A0A0A0MRY4 1105 aa7.34□□□□□ -1.23
SNORA40.2-201ENST00000390847 FAM229AH3BQW9 127 aa7.34□□□□□ -1.23
SNORA40.2-201ENST00000390847 SOX1O00570 391 aaPredicted RBP7.34□□□□□ -1.23
SNORA40.2-201ENST00000390847 VAMP1P23763 118 aa7.34□□□□□ -1.23
SNORA40.2-201ENST00000390847 GSTM4Q03013 218 aa7.34□□□□□ -1.23
SNORA40.2-201ENST00000390847 PPP2R3AQ06190 1150 aa7.34□□□□□ -1.23
SNORA40.2-201ENST00000390847 FAAP100Q0VG06 881 aa7.34□□□□□ -1.23
SNORA40.2-201ENST00000390847 TRIM28Q13263 835 aaKnown RBP7.34□□□□□ -1.23
SNORA40.2-201ENST00000390847 TAF1CQ15572 869 aaPredicted RBP7.34□□□□□ -1.23
SNORA40.2-201ENST00000390847 ZNF423Q2M1K9 1284 aa7.34□□□□□ -1.23
SNORA40.2-201ENST00000390847 PRRT3Q5FWE3 981 aa7.34□□□□□ -1.23
SNORA40.2-201ENST00000390847 MAP4K3Q8IVH8 894 aa7.34□□□□□ -1.23
SNORA40.2-201ENST00000390847 DDX54Q8TDD1 881 aaKnown RBP7.34□□□□□ -1.23
SNORA40.2-201ENST00000390847 CEP44Q9C0F1 390 aa7.34□□□□□ -1.23
SNORA40.2-201ENST00000390847 RECKO95980 971 aa7.33□□□□□ -1.24
SNORA40.2-201ENST00000390847 B3GALT4O96024 378 aa7.33□□□□□ -1.24
SNORA40.2-201ENST00000390847 C19orf57Q0VDD7 668 aa7.33□□□□□ -1.24
SNORA40.2-201ENST00000390847 SETDB1Q15047 1291 aa7.33□□□□□ -1.24
SNORA40.2-201ENST00000390847 CCDC85BQ15834 202 aaPredicted RBP7.33□□□□□ -1.24
SNORA40.2-201ENST00000390847 HGSNATQ68CP4 663 aa7.33□□□□□ -1.24
SNORA40.2-201ENST00000390847 DTWD1Q8N5C7 304 aa7.33□□□□□ -1.24
SNORA40.2-201ENST00000390847 WNT8BQ93098 351 aa7.33□□□□□ -1.24
SNORA40.2-201ENST00000390847 SRA1Q9HD15 236 aaKnown RBP7.33□□□□□ -1.24
SNORA40.2-201ENST00000390847 TMEM39AQ9NV64 488 aa7.33□□□□□ -1.24
SNORA40.2-201ENST00000390847 DEAF1O75398 565 aaPredicted RBP7.32□□□□□ -1.24
SNORA40.2-201ENST00000390847 FMR1NBQ8N0W7 255 aaPredicted RBP7.32□□□□□ -1.24
SNORA40.2-201ENST00000390847 KLHL23Q8NBE8 558 aa7.32□□□□□ -1.24
SNORA40.2-201ENST00000390847 DCAF11Q8TEB1 546 aa7.32□□□□□ -1.24
SNORA40.2-201ENST00000390847 OSGEPQ9NPF4 335 aa7.32□□□□□ -1.24
SNORA40.2-201ENST00000390847 ST13P50502 369 aaKnown RBP7.31□□□□□ -1.24
SNORA40.2-201ENST00000390847 NLRP12P59046 1061 aa7.31□□□□□ -1.24
SNORA40.2-201ENST00000390847 FBXO11Q86XK2 927 aa7.31□□□□□ -1.24
SNORA40.2-201ENST00000390847 GALNT11Q8NCW6 608 aa7.31□□□□□ -1.24
SNORA40.2-201ENST00000390847 KLHDC7BQ96G42 594 aa7.31□□□□□ -1.24
SNORA40.2-201ENST00000390847 SOX17Q9H6I2 414 aaPredicted RBP7.31□□□□□ -1.24
SNORA40.2-201ENST00000390847 STK17AQ9UEE5 414 aa7.31□□□□□ -1.24
SNORA40.2-201ENST00000390847 USP31Q70CQ4 1352 aa7.31□□□□□ -1.24
SNORA40.2-201ENST00000390847 SCAMP3O14828 347 aaKnown RBP7.3□□□□□ -1.24
SNORA40.2-201ENST00000390847 EIF4EBP3O60516 100 aaPredicted RBP7.3□□□□□ -1.24
SNORA40.2-201ENST00000390847 CELA3AP09093 270 aa7.3□□□□□ -1.24
SNORA40.2-201ENST00000390847 CD68P34810 354 aaPredicted RBP7.3□□□□□ -1.24
SNORA40.2-201ENST00000390847 SUZ12Q15022 739 aaKnown RBP7.3□□□□□ -1.24
SNORA40.2-201ENST00000390847 MAP3K11Q16584 847 aa7.3□□□□□ -1.24
SNORA40.2-201ENST00000390847 SV2BQ7L1I2 683 aa7.3□□□□□ -1.24
SNORA40.2-201ENST00000390847 NECAB3Q96P71 396 aaPredicted RBP7.3□□□□□ -1.24
SNORA40.2-201ENST00000390847 USP26Q9BXU7 913 aa7.3□□□□□ -1.24
SNORA40.2-201ENST00000390847 ENC1O14682 589 aa7.29□□□□□ -1.24
SNORA40.2-201ENST00000390847 DDX3YO15523 660 aaKnown RBP7.29□□□□□ -1.24
SNORA40.2-201ENST00000390847 CYP11A1P05108 521 aa7.29□□□□□ -1.24
SNORA40.2-201ENST00000390847 ELNP15502 786 aa7.29□□□□□ -1.24
SNORA40.2-201ENST00000390847 ZNF76P36508 570 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms