RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 TM4SF5O14894 197 aa1.62□□□□□ -2.15
RNU6-540P-201ENST00000384622 ADAM11O75078 769 aa1.62□□□□□ -2.15
RNU6-540P-201ENST00000384622 ARID4AP29374 1257 aaPredicted RBP1.62□□□□□ -2.15
RNU6-540P-201ENST00000384622 AFF3P51826 1226 aaKnown RBP1.62□□□□□ -2.15
RNU6-540P-201ENST00000384622 NUTM2GQ5VZR2 741 aa1.62□□□□□ -2.15
RNU6-540P-201ENST00000384622 DPY19L2P1Q6NXN4 242 aa1.62□□□□□ -2.15
RNU6-540P-201ENST00000384622 SHISA4Q96DD7 197 aa1.62□□□□□ -2.15
RNU6-540P-201ENST00000384622 HSH2DQ96JZ2 352 aa1.62□□□□□ -2.15
RNU6-540P-201ENST00000384622 RBSNQ9H1K0 784 aa1.62□□□□□ -2.15
RNU6-540P-201ENST00000384622 LIMD1Q9UGP4 676 aa1.62□□□□□ -2.15
RNU6-540P-201ENST00000384622 SERTAD1Q9UHV2 236 aa1.62□□□□□ -2.15
RNU6-540P-201ENST00000384622 TRIM33Q9UPN9 1127 aa1.62□□□□□ -2.15
RNU6-540P-201ENST00000384622 A6NJY4 79 aa1.61□□□□□ -2.15
RNU6-540P-201ENST00000384622 SLC22A31A6NKX4 558 aa1.61□□□□□ -2.15
RNU6-540P-201ENST00000384622 PROB1E7EW31 1015 aa1.61□□□□□ -2.15
RNU6-540P-201ENST00000384622 J3QW42 95 aa1.61□□□□□ -2.15
RNU6-540P-201ENST00000384622 FSCN2O14926 492 aa1.61□□□□□ -2.15
RNU6-540P-201ENST00000384622 GHRHP01286 108 aa1.61□□□□□ -2.15
RNU6-540P-201ENST00000384622 SCNN1DP51172 638 aa1.61□□□□□ -2.15
RNU6-540P-201ENST00000384622 MCCD1P59942 119 aaPredicted RBP1.61□□□□□ -2.15
RNU6-540P-201ENST00000384622 USP4Q13107 963 aa1.61□□□□□ -2.15
RNU6-540P-201ENST00000384622 IFI16Q16666 785 aaKnown RBP1.61□□□□□ -2.15
RNU6-540P-201ENST00000384622 VMACQ2NL98 169 aa1.61□□□□□ -2.15
RNU6-540P-201ENST00000384622 TUSC1Q2TAM9 212 aa1.61□□□□□ -2.15
RNU6-540P-201ENST00000384622 CYP27C1Q4G0S4 372 aa1.61□□□□□ -2.15
RNU6-540P-201ENST00000384622 UBXN11Q5T124 520 aa1.61□□□□□ -2.15
RNU6-540P-201ENST00000384622 TMEM132EQ6IEE7 984 aa1.61□□□□□ -2.15
RNU6-540P-201ENST00000384622 OGFOD3Q6PK18 319 aa1.61□□□□□ -2.15
RNU6-540P-201ENST00000384622 SPRED1Q7Z699 444 aa1.61□□□□□ -2.15
RNU6-540P-201ENST00000384622 FAM181AQ8N9Y4 354 aa1.61□□□□□ -2.15
RNU6-540P-201ENST00000384622 EPS8L1Q8TE68 723 aa1.61□□□□□ -2.15
RNU6-540P-201ENST00000384622 EZH1Q92800 747 aaPredicted RBP1.61□□□□□ -2.15
RNU6-540P-201ENST00000384622 ZNF232Q9UNY5 417 aa1.61□□□□□ -2.15
RNU6-540P-201ENST00000384622 WDR33Q9C0J8 1336 aaKnown RBP1.61□□□□□ -2.15
RNU6-540P-201ENST00000384622 DCAF8L2P0C7V8 631 aa1.6□□□□□ -2.15
RNU6-540P-201ENST00000384622 ZNF20P17024 532 aa1.6□□□□□ -2.15
RNU6-540P-201ENST00000384622 NOS2P35228 1153 aa1.6□□□□□ -2.15
RNU6-540P-201ENST00000384622 IKZF1Q13422 519 aa1.6□□□□□ -2.15
RNU6-540P-201ENST00000384622 MAP7Q14244 749 aa1.6□□□□□ -2.15
RNU6-540P-201ENST00000384622 SSPNQ14714 243 aa1.6□□□□□ -2.15
RNU6-540P-201ENST00000384622 MTFR1Q15390 333 aa1.6□□□□□ -2.15
RNU6-540P-201ENST00000384622 FBXO31Q5XUX0 539 aaPredicted RBP1.6□□□□□ -2.15
RNU6-540P-201ENST00000384622 KRT25Q7Z3Z0 450 aa1.6□□□□□ -2.15
RNU6-540P-201ENST00000384622 ZNF280CQ8ND82 737 aa1.6□□□□□ -2.15
RNU6-540P-201ENST00000384622 ZDHHC1Q8WTX9 485 aa1.6□□□□□ -2.15
RNU6-540P-201ENST00000384622 KLHDC7BQ96G42 594 aa1.6□□□□□ -2.15
RNU6-540P-201ENST00000384622 CRAMP1Q96RY5 1269 aa1.6□□□□□ -2.15
RNU6-540P-201ENST00000384622 C1QTNF3Q9BXJ4 246 aa1.6□□□□□ -2.15
RNU6-540P-201ENST00000384622 CYP4F12Q9HCS2 524 aa1.6□□□□□ -2.15
RNU6-540P-201ENST00000384622 LUC7LQ9NQ29 371 aaKnown RBP1.6□□□□□ -2.15
RNU6-540P-201ENST00000384622 ZFATQ9P243 1243 aa1.6□□□□□ -2.15
RNU6-540P-201ENST00000384622 SALL3Q9BXA9 1300 aa1.6□□□□□ -2.15
RNU6-540P-201ENST00000384622 TMEM265A0A087WTH1 108 aa1.59□□□□□ -2.15
RNU6-540P-201ENST00000384622 LOC102724428A0A0B4J2F2 783 aa1.59□□□□□ -2.15
RNU6-540P-201ENST00000384622 TESPA1A2RU30 521 aaPredicted RBP1.59□□□□□ -2.15
RNU6-540P-201ENST00000384622 CYSRT1A8MQ03 144 aa1.59□□□□□ -2.15
RNU6-540P-201ENST00000384622 ZBBXA8MT70 800 aa1.59□□□□□ -2.15
RNU6-540P-201ENST00000384622 CILPO75339 1184 aa1.59□□□□□ -2.15
RNU6-540P-201ENST00000384622 NFICP08651 508 aa1.59□□□□□ -2.15
RNU6-540P-201ENST00000384622 NRLP54845 237 aa1.59□□□□□ -2.15
RNU6-540P-201ENST00000384622 SIK1P57059 783 aa1.59□□□□□ -2.15
RNU6-540P-201ENST00000384622 TTLL12Q14166 644 aaPredicted RBP1.59□□□□□ -2.15
RNU6-540P-201ENST00000384622 FHL2Q14192 279 aa1.59□□□□□ -2.15
RNU6-540P-201ENST00000384622 EPHA10Q5JZY3 1008 aa1.59□□□□□ -2.15
RNU6-540P-201ENST00000384622 ZFYVE27Q5T4F4 411 aa1.59□□□□□ -2.15
RNU6-540P-201ENST00000384622 PANK1Q8TE04 598 aa1.59□□□□□ -2.15
RNU6-540P-201ENST00000384622 SUSD3Q96L08 255 aa1.59□□□□□ -2.15
RNU6-540P-201ENST00000384622 MCOLN1Q9GZU1 580 aa1.59□□□□□ -2.15
RNU6-540P-201ENST00000384622 VPS11Q9H270 941 aa1.59□□□□□ -2.15
RNU6-540P-201ENST00000384622 SEC31BQ9NQW1 1179 aa1.59□□□□□ -2.15
RNU6-540P-201ENST00000384622 LOC100289279A0A1B0GTE1 492 aa1.58□□□□□ -2.16
RNU6-540P-201ENST00000384622 SEMA7AO75326 666 aa1.58□□□□□ -2.16
RNU6-540P-201ENST00000384622 KRTAP5-8O75690 187 aa1.58□□□□□ -2.16
RNU6-540P-201ENST00000384622 TIAF1O95411 115 aa1.58□□□□□ -2.16
RNU6-540P-201ENST00000384622 RARAP10276 462 aa1.58□□□□□ -2.16
RNU6-540P-201ENST00000384622 DRD2P14416 443 aa1.58□□□□□ -2.16
RNU6-540P-201ENST00000384622 PI3P19957 117 aa1.58□□□□□ -2.16
RNU6-540P-201ENST00000384622 TARSP26639 723 aaKnown RBP1.58□□□□□ -2.16
RNU6-540P-201ENST00000384622 NLRP12P59046 1061 aa1.58□□□□□ -2.16
RNU6-540P-201ENST00000384622 TEAD4Q15561 434 aa1.58□□□□□ -2.16
RNU6-540P-201ENST00000384622 ARHGAP27Q6ZUM4 889 aa1.58□□□□□ -2.16
RNU6-540P-201ENST00000384622 BTLAQ7Z6A9 289 aa1.58□□□□□ -2.16
RNU6-540P-201ENST00000384622 ZNF592Q92610 1267 aa1.58□□□□□ -2.16
RNU6-540P-201ENST00000384622 DACT3Q96B18 629 aaPredicted RBP1.58□□□□□ -2.16
RNU6-540P-201ENST00000384622 CHFRQ96EP1 664 aa1.58□□□□□ -2.16
RNU6-540P-201ENST00000384622 ZNF747Q9BV97 191 aa1.58□□□□□ -2.16
RNU6-540P-201ENST00000384622 CTGFP29279 349 aa1.57□□□□□ -2.16
RNU6-540P-201ENST00000384622 CDC27P30260 824 aa1.57□□□□□ -2.16
RNU6-540P-201ENST00000384622 GDNFP39905 211 aa1.57□□□□□ -2.16
RNU6-540P-201ENST00000384622 SMG8Q8ND04 991 aaKnown RBP1.57□□□□□ -2.16
RNU6-540P-201ENST00000384622 ABHD4Q8TB40 342 aa1.57□□□□□ -2.16
RNU6-540P-201ENST00000384622 ASB11Q8WXH4 323 aa1.57□□□□□ -2.16
RNU6-540P-201ENST00000384622 C8orf49Q96NF6 230 aa1.57□□□□□ -2.16
RNU6-540P-201ENST00000384622 CEP89Q96ST8 783 aa1.57□□□□□ -2.16
RNU6-540P-201ENST00000384622 KRTAP3-1Q9BYR8 98 aa1.57□□□□□ -2.16
RNU6-540P-201ENST00000384622 LACRTQ9GZZ8 138 aa1.57□□□□□ -2.16
RNU6-540P-201ENST00000384622 POU3F3P20264 500 aaPredicted RBP1.56□□□□□ -2.16
RNU6-540P-201ENST00000384622 ZNF362Q5T0B9 420 aaPredicted RBP1.56□□□□□ -2.16
RNU6-540P-201ENST00000384622 GRASPQ7Z6J2 395 aaPredicted RBP1.56□□□□□ -2.16
RNU6-540P-201ENST00000384622 CCDC85AQ96PX6 553 aaPredicted RBP1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms