RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 BAG6P46379 1132 aa5.71□□□□□ -1.5
RNU6-39P-201ENST00000384344 PTPN12Q05209 780 aaKnown RBP5.71□□□□□ -1.5
RNU6-39P-201ENST00000384344 KCNMA1Q12791 1236 aa5.71□□□□□ -1.5
RNU6-39P-201ENST00000384344 PSMD2Q13200 908 aa5.71□□□□□ -1.5
RNU6-39P-201ENST00000384344 FBXO11Q86XK2 927 aa5.71□□□□□ -1.5
RNU6-39P-201ENST00000384344 DUSP9Q99956 384 aaKnown RBP5.71□□□□□ -1.5
RNU6-39P-201ENST00000384344 CLEC4MQ9H2X3 399 aaPredicted RBP5.71□□□□□ -1.5
RNU6-39P-201ENST00000384344 OSGEPQ9NPF4 335 aa5.71□□□□□ -1.5
RNU6-39P-201ENST00000384344 SEC31BQ9NQW1 1179 aa5.71□□□□□ -1.5
RNU6-39P-201ENST00000384344 WWC3Q9ULE0 1092 aa5.71□□□□□ -1.5
RNU6-39P-201ENST00000384344 SOX13Q9UN79 622 aa5.71□□□□□ -1.5
RNU6-39P-201ENST00000384344 FSCN2O14926 492 aa5.7□□□□□ -1.5
RNU6-39P-201ENST00000384344 FCGRTP55899 365 aa5.7□□□□□ -1.5
RNU6-39P-201ENST00000384344 HNRNPUQ00839 825 aaKnown RBP eCLIP5.7□□□□□ -1.5
RNU6-39P-201ENST00000384344 NRG1Q02297 640 aaPredicted RBP5.7□□□□□ -1.5
RNU6-39P-201ENST00000384344 RASSF7Q02833 373 aa5.7□□□□□ -1.5
RNU6-39P-201ENST00000384344 PCDH1Q08174 1060 aa5.7□□□□□ -1.5
RNU6-39P-201ENST00000384344 C19orf57Q0VDD7 668 aa5.7□□□□□ -1.5
RNU6-39P-201ENST00000384344 RPS26P11Q5JNZ5 115 aaPredicted RBP5.7□□□□□ -1.5
RNU6-39P-201ENST00000384344 NXPE4Q6UWF7 544 aa5.7□□□□□ -1.5
RNU6-39P-201ENST00000384344 PI16Q6UXB8 463 aa5.7□□□□□ -1.5
RNU6-39P-201ENST00000384344 TMEM151AQ8N4L1 468 aa5.7□□□□□ -1.5
RNU6-39P-201ENST00000384344 GIPC2Q8TF65 315 aa5.7□□□□□ -1.5
RNU6-39P-201ENST00000384344 SLC7A3Q8WY07 619 aa5.7□□□□□ -1.5
RNU6-39P-201ENST00000384344 PODXL2Q9NZ53 605 aa5.7□□□□□ -1.5
RNU6-39P-201ENST00000384344 FAM8A1Q9UBU6 413 aa5.7□□□□□ -1.5
RNU6-39P-201ENST00000384344 USP21Q9UK80 565 aa5.7□□□□□ -1.5
RNU6-39P-201ENST00000384344 METTL12A8MUP2 240 aa5.69□□□□□ -1.5
RNU6-39P-201ENST00000384344 C9orf172C9J069 976 aa5.69□□□□□ -1.5
RNU6-39P-201ENST00000384344 FAM229AH3BQW9 127 aa5.69□□□□□ -1.5
RNU6-39P-201ENST00000384344 GDF11O95390 407 aa5.69□□□□□ -1.5
RNU6-39P-201ENST00000384344 ITPKAP23677 461 aa5.69□□□□□ -1.5
RNU6-39P-201ENST00000384344 GRIA4P48058 902 aa5.69□□□□□ -1.5
RNU6-39P-201ENST00000384344 PPP2R3AQ06190 1150 aa5.69□□□□□ -1.5
RNU6-39P-201ENST00000384344 SUZ12Q15022 739 aaKnown RBP5.69□□□□□ -1.5
RNU6-39P-201ENST00000384344 SPRED3Q2MJR0 410 aa5.69□□□□□ -1.5
RNU6-39P-201ENST00000384344 TXNDC11Q6PKC3 985 aa5.69□□□□□ -1.5
RNU6-39P-201ENST00000384344 IGF2-ASQ6U949 168 aa5.69□□□□□ -1.5
RNU6-39P-201ENST00000384344 FBXO33Q7Z6M2 555 aa5.69□□□□□ -1.5
RNU6-39P-201ENST00000384344 SETDB2Q96T68 719 aa5.69□□□□□ -1.5
RNU6-39P-201ENST00000384344 C12orf49Q9H741 205 aa5.69□□□□□ -1.5
RNU6-39P-201ENST00000384344 ABCB6Q9NP58 842 aa5.69□□□□□ -1.5
RNU6-39P-201ENST00000384344 AKAP2Q9Y2D5 859 aa5.69□□□□□ -1.5
RNU6-39P-201ENST00000384344 ESRRAP11474 423 aaPredicted RBP5.68□□□□□ -1.5
RNU6-39P-201ENST00000384344 COL8A1P27658 744 aa5.68□□□□□ -1.5
RNU6-39P-201ENST00000384344 CD68P34810 354 aaPredicted RBP5.68□□□□□ -1.5
RNU6-39P-201ENST00000384344 SETDB1Q15047 1291 aa5.68□□□□□ -1.5
RNU6-39P-201ENST00000384344 HP1BP3Q5SSJ5 553 aaPredicted RBP5.68□□□□□ -1.5
RNU6-39P-201ENST00000384344 VN1R5Q7Z5H4 357 aa5.68□□□□□ -1.5
RNU6-39P-201ENST00000384344 DCAF5Q96JK2 942 aa5.68□□□□□ -1.5
RNU6-39P-201ENST00000384344 CARD10Q9BWT7 1032 aa5.68□□□□□ -1.5
RNU6-39P-201ENST00000384344 CEP44Q9C0F1 390 aa5.68□□□□□ -1.5
RNU6-39P-201ENST00000384344 MRPL18Q9H0U6 180 aaKnown RBP5.68□□□□□ -1.5
RNU6-39P-201ENST00000384344 ZNF576Q9H609 170 aa5.68□□□□□ -1.5
RNU6-39P-201ENST00000384344 SOX17Q9H6I2 414 aaPredicted RBP5.68□□□□□ -1.5
RNU6-39P-201ENST00000384344 PARP2Q9UGN5 583 aa5.68□□□□□ -1.5
RNU6-39P-201ENST00000384344 PPM1HQ9ULR3 514 aa5.68□□□□□ -1.5
RNU6-39P-201ENST00000384344 SORBS3O60504 671 aa5.67□□□□□ -1.5
RNU6-39P-201ENST00000384344 DEAF1O75398 565 aaPredicted RBP5.67□□□□□ -1.5
RNU6-39P-201ENST00000384344 USP17L7P0C7H9 530 aa5.67□□□□□ -1.5
RNU6-39P-201ENST00000384344 GSTM4Q03013 218 aa5.67□□□□□ -1.5
RNU6-39P-201ENST00000384344 TMC4Q7Z404 712 aa5.67□□□□□ -1.5
RNU6-39P-201ENST00000384344 VTI1BQ9UEU0 232 aa5.67□□□□□ -1.5
RNU6-39P-201ENST00000384344 GPN3Q9UHW5 284 aaPredicted RBP5.67□□□□□ -1.5
RNU6-39P-201ENST00000384344 SAMM50Q9Y512 469 aa5.67□□□□□ -1.5
RNU6-39P-201ENST00000384344 AK5Q9Y6K8 562 aa5.67□□□□□ -1.5
RNU6-39P-201ENST00000384344 DLL1O00548 723 aa5.66□□□□□ -1.5
RNU6-39P-201ENST00000384344 B3GALT4O96024 378 aa5.66□□□□□ -1.5
RNU6-39P-201ENST00000384344 CYP11A1P05108 521 aa5.66□□□□□ -1.5
RNU6-39P-201ENST00000384344 DAB2P98082 770 aa5.66□□□□□ -1.5
RNU6-39P-201ENST00000384344 AP3B2Q13367 1082 aa5.66□□□□□ -1.5
RNU6-39P-201ENST00000384344 GRIK4Q16099 956 aa5.66□□□□□ -1.5
RNU6-39P-201ENST00000384344 GLIS3Q8NEA6 775 aa5.66□□□□□ -1.5
RNU6-39P-201ENST00000384344 LENG1Q96BZ8 264 aaPredicted RBP5.66□□□□□ -1.5
RNU6-39P-201ENST00000384344 OSBPL7Q9BZF2 842 aa5.66□□□□□ -1.5
RNU6-39P-201ENST00000384344 SOX1O00570 391 aaPredicted RBP5.65□□□□□ -1.5
RNU6-39P-201ENST00000384344 NLRP12P59046 1061 aa5.65□□□□□ -1.5
RNU6-39P-201ENST00000384344 DUOXA2Q1HG44 320 aa5.65□□□□□ -1.5
RNU6-39P-201ENST00000384344 ADAMTSL4Q6UY14 1074 aa5.65□□□□□ -1.5
RNU6-39P-201ENST00000384344 ILDR2Q71H61 639 aa5.65□□□□□ -1.5
RNU6-39P-201ENST00000384344 CORO1BQ9BR76 489 aa5.65□□□□□ -1.5
RNU6-39P-201ENST00000384344 USP26Q9BXU7 913 aa5.65□□□□□ -1.5
RNU6-39P-201ENST00000384344 TMEM39AQ9NV64 488 aa5.65□□□□□ -1.5
RNU6-39P-201ENST00000384344 TTF2Q9UNY4 1162 aaKnown RBP5.65□□□□□ -1.5
RNU6-39P-201ENST00000384344 KRBA1A5PL33 1030 aa5.64□□□□□ -1.51
RNU6-39P-201ENST00000384344 ZNF423Q2M1K9 1284 aa5.64□□□□□ -1.51
RNU6-39P-201ENST00000384344 ACAD11Q709F0 780 aa5.64□□□□□ -1.51
RNU6-39P-201ENST00000384344 GALNT11Q8NCW6 608 aa5.64□□□□□ -1.51
RNU6-39P-201ENST00000384344 KLHDC7BQ96G42 594 aa5.64□□□□□ -1.51
RNU6-39P-201ENST00000384344 AKTIPQ9H8T0 292 aa5.64□□□□□ -1.51
RNU6-39P-201ENST00000384344 RBM47A0AV96 593 aaKnown RBP5.63□□□□□ -1.51
RNU6-39P-201ENST00000384344 ZNF16P17020 682 aaPredicted RBP5.63□□□□□ -1.51
RNU6-39P-201ENST00000384344 POU4F3Q15319 338 aa5.63□□□□□ -1.51
RNU6-39P-201ENST00000384344 FOXD4L6Q3SYB3 417 aaPredicted RBP5.63□□□□□ -1.51
RNU6-39P-201ENST00000384344 DIEXFQ68CQ4 756 aaKnown RBP5.63□□□□□ -1.51
RNU6-39P-201ENST00000384344 SHISA2Q6UWI4 295 aa5.63□□□□□ -1.51
RNU6-39P-201ENST00000384344 FOXD4L3Q6VB84 417 aaPredicted RBP5.63□□□□□ -1.51
RNU6-39P-201ENST00000384344 TPTE2Q6XPS3 522 aa5.63□□□□□ -1.51
RNU6-39P-201ENST00000384344 C3orf58Q8NDZ4 430 aa5.63□□□□□ -1.51
RNU6-39P-201ENST00000384344 ANKRD24Q8TF21 1146 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms