RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 ZKSCAN4Q969J2 545 aaPredicted RBP17.24■□□□□ 0.35
VLDLR-202ENST00000382099 PHACTR3Q96KR7 559 aa17.24■□□□□ 0.35
VLDLR-202ENST00000382099 CHUKO15111 745 aa17.23■□□□□ 0.35
VLDLR-202ENST00000382099 RRS1Q15050 365 aaKnown RBP17.23■□□□□ 0.35
VLDLR-202ENST00000382099 TICAM2Q86XR7 235 aa17.23■□□□□ 0.35
VLDLR-202ENST00000382099 LZTFL1Q9NQ48 299 aa17.23■□□□□ 0.35
VLDLR-202ENST00000382099 CCDC9Q9Y3X0 531 aaKnown RBP17.23■□□□□ 0.35
VLDLR-202ENST00000382099 PTPRMP28827 1452 aa17.23■□□□□ 0.35
VLDLR-202ENST00000382099 SSH2Q76I76 1423 aa17.23■□□□□ 0.35
VLDLR-202ENST00000382099 RAB11FIP3O75154 756 aa17.23■□□□□ 0.35
VLDLR-202ENST00000382099 TOP1P11387 765 aaKnown RBP17.23■□□□□ 0.35
VLDLR-202ENST00000382099 CCNHP51946 323 aaPredicted RBP17.23■□□□□ 0.35
VLDLR-202ENST00000382099 AKAP17AQ02040 695 aaKnown RBP17.23■□□□□ 0.35
VLDLR-202ENST00000382099 ST3GAL1Q11201 340 aa17.23■□□□□ 0.35
VLDLR-202ENST00000382099 DPCR1Q3MIW9 517 aa17.23■□□□□ 0.35
VLDLR-202ENST00000382099 HSP90AA4PQ58FG1 418 aa17.23■□□□□ 0.35
VLDLR-202ENST00000382099 ANKZF1Q9H8Y5 726 aa17.23■□□□□ 0.35
VLDLR-202ENST00000382099 PNPLA6Q8IY17 1366 aa17.23■□□□□ 0.35
VLDLR-202ENST00000382099 CAND2O75155 1236 aa17.23■□□□□ 0.35
VLDLR-202ENST00000382099 KIF4BQ2VIQ3 1234 aa17.23■□□□□ 0.35
VLDLR-202ENST00000382099 RNF187Q5TA31 235 aaPredicted RBP17.23■□□□□ 0.35
VLDLR-202ENST00000382099 SRGAP1Q7Z6B7 1085 aa17.23■□□□□ 0.35
VLDLR-202ENST00000382099 MLH3Q9UHC1 1453 aa17.22■□□□□ 0.35
VLDLR-202ENST00000382099 FAM83GA6ND36 823 aa17.22■□□□□ 0.35
VLDLR-202ENST00000382099 LRRIQ3A6PVS8 624 aaPredicted RBP17.22■□□□□ 0.35
VLDLR-202ENST00000382099 SGSM2O43147 1006 aa17.22■□□□□ 0.35
VLDLR-202ENST00000382099 C21orf2O43822 256 aa17.22■□□□□ 0.35
VLDLR-202ENST00000382099 RPSAP08865 295 aaKnown RBP17.22■□□□□ 0.35
VLDLR-202ENST00000382099 UBASH3AP57075 661 aa17.22■□□□□ 0.35
VLDLR-202ENST00000382099 FANCCQ00597 558 aa17.22■□□□□ 0.35
VLDLR-202ENST00000382099 ANKRD18AQ8IVF6 992 aa17.22■□□□□ 0.35
VLDLR-202ENST00000382099 IGSF22Q8N9C0 903 aa17.22■□□□□ 0.35
VLDLR-202ENST00000382099 GBP3Q9H0R5 595 aa17.22■□□□□ 0.35
VLDLR-202ENST00000382099 MYO5BQ9ULV0 1848 aa17.22■□□□□ 0.35
VLDLR-202ENST00000382099 A0A1B0GUA9 196 aa17.22■□□□□ 0.35
VLDLR-202ENST00000382099 MCM8Q9UJA3 840 aa17.22■□□□□ 0.35
VLDLR-202ENST00000382099 CFAP45Q9UL16 551 aa17.22■□□□□ 0.35
VLDLR-202ENST00000382099 POTEB2H3BUK9 544 aa17.21■□□□□ 0.35
VLDLR-202ENST00000382099 ATP1A3P13637 1013 aa17.21■□□□□ 0.35
VLDLR-202ENST00000382099 ERCC3P19447 782 aa17.21■□□□□ 0.35
VLDLR-202ENST00000382099 RBM5P52756 815 aaKnown RBP eCLIP17.21■□□□□ 0.35
VLDLR-202ENST00000382099 STAG1Q8WVM7 1258 aa17.21■□□□□ 0.35
VLDLR-202ENST00000382099 KLHL33A6NCF5 533 aa17.21■□□□□ 0.35
VLDLR-202ENST00000382099 ZKSCAN1P17029 563 aaPredicted RBP17.21■□□□□ 0.35
VLDLR-202ENST00000382099 CDR1P51861 262 aa17.21■□□□□ 0.35
VLDLR-202ENST00000382099 SIL1Q9H173 461 aa17.21■□□□□ 0.35
VLDLR-202ENST00000382099 GOLPH3LQ9H4A5 285 aa17.21■□□□□ 0.35
VLDLR-202ENST00000382099 EMILIN1Q9Y6C2 1016 aa17.21■□□□□ 0.35
VLDLR-202ENST00000382099 TFRCP02786 760 aaKnown RBP17.21■□□□□ 0.34
VLDLR-202ENST00000382099 KCNJ6P48051 423 aa17.21■□□□□ 0.34
VLDLR-202ENST00000382099 E2F5Q15329 346 aa17.21■□□□□ 0.34
VLDLR-202ENST00000382099 CEP112Q8N8E3 955 aa17.21■□□□□ 0.34
VLDLR-202ENST00000382099 KAT14Q9H8E8 782 aa17.21■□□□□ 0.34
VLDLR-202ENST00000382099 SPATS2LQ9NUQ6 558 aaKnown RBP17.21■□□□□ 0.34
VLDLR-202ENST00000382099 OSCARQ8IYS5 282 aa17.2■□□□□ 0.34
VLDLR-202ENST00000382099 SCLT1Q96NL6 688 aa17.2■□□□□ 0.34
VLDLR-202ENST00000382099 PPFIA3O75145 1194 aa17.2■□□□□ 0.34
VLDLR-202ENST00000382099 AP1G2O75843 785 aa17.2■□□□□ 0.34
VLDLR-202ENST00000382099 GBP2P32456 591 aaPredicted RBP17.2■□□□□ 0.34
VLDLR-202ENST00000382099 NFE2L2Q16236 605 aa17.2■□□□□ 0.34
VLDLR-202ENST00000382099 CEP85LQ5SZL2 805 aa17.2■□□□□ 0.34
VLDLR-202ENST00000382099 TXNDC2Q86VQ3 553 aa17.2■□□□□ 0.34
VLDLR-202ENST00000382099 FAM76AQ8TAV0 307 aa17.2■□□□□ 0.34
VLDLR-202ENST00000382099 LSG1Q9H089 658 aaKnown RBP17.2■□□□□ 0.34
VLDLR-202ENST00000382099 CUTAO60888 179 aa17.19■□□□□ 0.34
VLDLR-202ENST00000382099 HNRNPLLQ8WVV9 542 aaKnown RBP17.19■□□□□ 0.34
VLDLR-202ENST00000382099 ARHGEF40Q8TER5 1519 aa17.19■□□□□ 0.34
VLDLR-202ENST00000382099 NBPF9Q3BBW0 867 aa17.19■□□□□ 0.34
VLDLR-202ENST00000382099 BRF1Q92994 677 aa17.19■□□□□ 0.34
VLDLR-202ENST00000382099 JAK2O60674 1132 aa17.19■□□□□ 0.34
VLDLR-202ENST00000382099 TBC1D8BQ0IIM8 1120 aa17.19■□□□□ 0.34
VLDLR-202ENST00000382099 C11orf91Q3C1V1 193 aa17.19■□□□□ 0.34
VLDLR-202ENST00000382099 TOGARAM2Q6ZUX3 1019 aa17.19■□□□□ 0.34
VLDLR-202ENST00000382099 TACO1Q9BSH4 297 aaKnown RBP17.19■□□□□ 0.34
VLDLR-202ENST00000382099 CDK19Q9BWU1 502 aa17.19■□□□□ 0.34
VLDLR-202ENST00000382099 ARHGAP6O43182 974 aa17.18■□□□□ 0.34
VLDLR-202ENST00000382099 GNAI2P04899 355 aa17.18■□□□□ 0.34
VLDLR-202ENST00000382099 ARMC3Q5W041 872 aa17.18■□□□□ 0.34
VLDLR-202ENST00000382099 BAG1Q99933 345 aaPredicted RBP17.18■□□□□ 0.34
VLDLR-202ENST00000382099 CRACR2AQ9BSW2 395 aa17.18■□□□□ 0.34
VLDLR-202ENST00000382099 KIF9Q9HAQ2 790 aa17.18■□□□□ 0.34
VLDLR-202ENST00000382099 TERF2IPQ9NYB0 399 aa17.18■□□□□ 0.34
VLDLR-202ENST00000382099 CLTCQ00610 1675 aaKnown RBP17.18■□□□□ 0.34
VLDLR-202ENST00000382099 EME2A4GXA9 379 aaPredicted RBP17.18■□□□□ 0.34
VLDLR-202ENST00000382099 FCHSD2O94868 740 aa17.18■□□□□ 0.34
VLDLR-202ENST00000382099 GNGT1P63211 74 aa17.18■□□□□ 0.34
VLDLR-202ENST00000382099 THOC1Q96FV9 657 aaKnown RBP17.18■□□□□ 0.34
VLDLR-202ENST00000382099 SLC4A2P04920 1241 aa17.17■□□□□ 0.34
VLDLR-202ENST00000382099 ZKSCAN8Q15776 578 aaPredicted RBP17.17■□□□□ 0.34
VLDLR-202ENST00000382099 NBPF10Q6P3W6 841 aaKnown RBP17.17■□□□□ 0.34
VLDLR-202ENST00000382099 NBPF5PQ86XG9 351 aaPredicted RBP17.17■□□□□ 0.34
VLDLR-202ENST00000382099 ZNF513Q8N8E2 541 aaPredicted RBP17.17■□□□□ 0.34
VLDLR-202ENST00000382099 ARMC2Q8NEN0 867 aa17.17■□□□□ 0.34
VLDLR-202ENST00000382099 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.17■□□□□ 0.34
VLDLR-202ENST00000382099 KIF20BQ96Q89 1820 aa17.17■□□□□ 0.34
VLDLR-202ENST00000382099 CDC42BPGQ6DT37 1551 aa17.17■□□□□ 0.34
VLDLR-202ENST00000382099 A0A1B0GVL5 298 aa17.17■□□□□ 0.34
VLDLR-202ENST00000382099 GOLGA6L9A6NEM1 432 aa17.17■□□□□ 0.34
VLDLR-202ENST00000382099 NDUFAB1O14561 156 aa17.17■□□□□ 0.34
VLDLR-202ENST00000382099 IRAK1P51617 712 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms