RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 TDRD7Q8NHU6 1098 aaKnown RBP6.51□□□□□ -1.37
RFC1-202ENST00000381897 SMARCE1Q969G3 411 aa6.51□□□□□ -1.37
RFC1-202ENST00000381897 GOLGA6AQ9NYA3 693 aa6.51□□□□□ -1.37
RFC1-202ENST00000381897 DACT1Q9NYF0 836 aa6.51□□□□□ -1.37
RFC1-202ENST00000381897 ZNF215Q9UL58 517 aaPredicted RBP6.51□□□□□ -1.37
RFC1-202ENST00000381897 ZNF131P52739 623 aa6.51□□□□□ -1.37
RFC1-202ENST00000381897 IRF5Q13568 498 aa6.51□□□□□ -1.37
RFC1-202ENST00000381897 TUBB2AQ13885 445 aa6.51□□□□□ -1.37
RFC1-202ENST00000381897 VPS53Q5VIR6 699 aa6.51□□□□□ -1.37
RFC1-202ENST00000381897 NBPF11Q86T75 865 aa6.51□□□□□ -1.37
RFC1-202ENST00000381897 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.51□□□□□ -1.377e-6■■□□□ 11.5
RFC1-202ENST00000381897 CLASRPQ8N2M8 674 aaKnown RBP6.51□□□□□ -1.37
RFC1-202ENST00000381897 TUBB2BQ9BVA1 445 aa6.51□□□□□ -1.37
RFC1-202ENST00000381897 ERVK-7P63135 1459 aa6.51□□□□□ -1.37
RFC1-202ENST00000381897 PSMA4P25789 261 aaKnown RBP6.51□□□□□ -1.37
RFC1-202ENST00000381897 ZBTB17Q13105 803 aa6.51□□□□□ -1.37
RFC1-202ENST00000381897 OXLD1Q5BKU9 147 aa6.51□□□□□ -1.37
RFC1-202ENST00000381897 SYNE3Q6ZMZ3 975 aa6.51□□□□□ -1.37
RFC1-202ENST00000381897 ANKRD20A12PQ8NF67 263 aa6.51□□□□□ -1.37
RFC1-202ENST00000381897 TRIM35Q9UPQ4 493 aa6.51□□□□□ -1.37
RFC1-202ENST00000381897 H0YC42 278 aa6.5□□□□□ -1.37
RFC1-202ENST00000381897 NDUFB5O43674 189 aa6.5□□□□□ -1.37
RFC1-202ENST00000381897 GLRX3O76003 335 aaKnown RBP6.5□□□□□ -1.37
RFC1-202ENST00000381897 CAPN2P17655 700 aa6.5□□□□□ -1.37
RFC1-202ENST00000381897 CHMLP26374 656 aa6.5□□□□□ -1.37
RFC1-202ENST00000381897 IQCEQ6IPM2 695 aa6.5□□□□□ -1.37
RFC1-202ENST00000381897 MICALCLQ6ZW33 695 aa6.5□□□□□ -1.37
RFC1-202ENST00000381897 TMC6Q7Z403 805 aa6.5□□□□□ -1.37
RFC1-202ENST00000381897 JMYQ8N9B5 988 aa6.5□□□□□ -1.37
RFC1-202ENST00000381897 DNAJC25Q9H1X3 360 aa6.5□□□□□ -1.37
RFC1-202ENST00000381897 MBIPQ9NS73 344 aa6.5□□□□□ -1.37
RFC1-202ENST00000381897 TSPYL4Q9UJ04 414 aa6.5□□□□□ -1.37
RFC1-202ENST00000381897 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.5□□□□□ -1.371e-7■■■■□ 19.8
RFC1-202ENST00000381897 RNF17Q9BXT8 1623 aaKnown RBP6.5□□□□□ -1.37
RFC1-202ENST00000381897 SURF6O75683 361 aaKnown RBP6.5□□□□□ -1.37
RFC1-202ENST00000381897 SLFN14P0C7P3 912 aa6.5□□□□□ -1.37
RFC1-202ENST00000381897 ME1P48163 572 aa6.5□□□□□ -1.37
RFC1-202ENST00000381897 CCDC158Q5M9N0 1113 aa6.5□□□□□ -1.37
RFC1-202ENST00000381897 NBPF14Q5TI25 921 aa6.5□□□□□ -1.37
RFC1-202ENST00000381897 DNAI1Q9UI46 699 aa6.5□□□□□ -1.37
RFC1-202ENST00000381897 NOS1P29475 1434 aa6.5□□□□□ -1.37
RFC1-202ENST00000381897 ERCC6L2Q5T890 1561 aa6.5□□□□□ -1.37
RFC1-202ENST00000381897 STK38Q15208 465 aa6.5□□□□□ -1.37
RFC1-202ENST00000381897 LRRFIP1Q32MZ4 808 aaKnown RBP6.5□□□□□ -1.37
RFC1-202ENST00000381897 HSP90AA5PQ58FG0 334 aa6.5□□□□□ -1.37
RFC1-202ENST00000381897 ATL3Q6DD88 541 aa6.5□□□□□ -1.37
RFC1-202ENST00000381897 HDXQ7Z353 690 aa6.5□□□□□ -1.37
RFC1-202ENST00000381897 CCDC125Q86Z20 511 aa6.5□□□□□ -1.37
RFC1-202ENST00000381897 CEP112Q8N8E3 955 aa6.5□□□□□ -1.37
RFC1-202ENST00000381897 NGDNQ8NEJ9 315 aaKnown RBP6.5□□□□□ -1.37
RFC1-202ENST00000381897 MGARPQ8TDB4 240 aa6.5□□□□□ -1.37
RFC1-202ENST00000381897 KIF1BPQ96EK5 621 aa6.5□□□□□ -1.37
RFC1-202ENST00000381897 GGT7Q9UJ14 662 aa6.5□□□□□ -1.37
RFC1-202ENST00000381897 MINK1Q8N4C8 1332 aaPredicted RBP6.5□□□□□ -1.37
RFC1-202ENST00000381897 PSDA5PKW4 1024 aaPredicted RBP6.5□□□□□ -1.37
RFC1-202ENST00000381897 OAS2P29728 719 aaKnown RBP6.5□□□□□ -1.37
RFC1-202ENST00000381897 CYP2C19P33261 490 aa6.5□□□□□ -1.37
RFC1-202ENST00000381897 ITKQ08881 620 aa6.5□□□□□ -1.37
RFC1-202ENST00000381897 PICALMQ13492 652 aa6.5□□□□□ -1.37
RFC1-202ENST00000381897 HSP90AB3PQ58FF7 597 aa6.5□□□□□ -1.37
RFC1-202ENST00000381897 NOC3LQ8WTT2 800 aaKnown RBP6.5□□□□□ -1.37
RFC1-202ENST00000381897 OSBPL3Q9H4L5 887 aa6.5□□□□□ -1.37
RFC1-202ENST00000381897 TRPM2O94759 1503 aa6.5□□□□□ -1.37
RFC1-202ENST00000381897 EFCAB8A8MWE9 144 aa6.49□□□□□ -1.37
RFC1-202ENST00000381897 HNRNPH2P55795 449 aaKnown RBP6.49□□□□□ -1.37
RFC1-202ENST00000381897 SYT10Q6XYQ8 523 aa6.49□□□□□ -1.37
RFC1-202ENST00000381897 LRRC8AQ8IWT6 810 aa6.49□□□□□ -1.37
RFC1-202ENST00000381897 GPR161Q8N6U8 529 aaKnown RBP6.49□□□□□ -1.37
RFC1-202ENST00000381897 SPIRE2Q8WWL2 714 aa6.49□□□□□ -1.37
RFC1-202ENST00000381897 USP6NLQ92738 828 aa6.49□□□□□ -1.37
RFC1-202ENST00000381897 CCDC47Q96A33 483 aaKnown RBP6.49□□□□□ -1.37
RFC1-202ENST00000381897 STRN4Q9NRL3 753 aa6.49□□□□□ -1.37
RFC1-202ENST00000381897 NSFL1CQ9UNZ2 370 aaKnown RBP6.49□□□□□ -1.37
RFC1-202ENST00000381897 MADDQ8WXG6 1647 aa6.49□□□□□ -1.37
RFC1-202ENST00000381897 KIF5CO60282 957 aa6.49□□□□□ -1.37
RFC1-202ENST00000381897 IPO7O95373 1038 aaKnown RBP6.49□□□□□ -1.37
RFC1-202ENST00000381897 TOP1P11387 765 aaKnown RBP6.49□□□□□ -1.37
RFC1-202ENST00000381897 AK2P54819 239 aa6.49□□□□□ -1.37
RFC1-202ENST00000381897 C16orf71Q8IYS4 520 aaPredicted RBP6.49□□□□□ -1.37
RFC1-202ENST00000381897 LRRC43Q8N309 656 aa6.49□□□□□ -1.37
RFC1-202ENST00000381897 TMCO5AQ8N6Q1 288 aa6.49□□□□□ -1.37
RFC1-202ENST00000381897 EXOC4Q96A65 974 aa6.49□□□□□ -1.37
RFC1-202ENST00000381897 TPX2Q9ULW0 747 aaKnown RBP6.49□□□□□ -1.37
RFC1-202ENST00000381897 EXOC6BQ9Y2D4 811 aa6.49□□□□□ -1.37
RFC1-202ENST00000381897 ZDHHC9Q9Y397 364 aa6.49□□□□□ -1.37
RFC1-202ENST00000381897 TRAPPC10P48553 1259 aa6.49□□□□□ -1.37
RFC1-202ENST00000381897 SERPINB4P48594 390 aa6.49□□□□□ -1.37
RFC1-202ENST00000381897 MUM1L1Q5H9M0 696 aa6.49□□□□□ -1.37
RFC1-202ENST00000381897 LRCH2Q5VUJ6 765 aa6.49□□□□□ -1.37
RFC1-202ENST00000381897 ICE2Q659A1 982 aa6.49□□□□□ -1.37
RFC1-202ENST00000381897 GET4Q7L5D6 327 aaPredicted RBP6.49□□□□□ -1.37
RFC1-202ENST00000381897 PNMA8AQ86V59 439 aaPredicted RBP6.49□□□□□ -1.37
RFC1-202ENST00000381897 CTCFLQ8NI51 663 aaPredicted RBP6.49□□□□□ -1.37
RFC1-202ENST00000381897 MPHOSPH8Q99549 860 aa6.49□□□□□ -1.37
RFC1-202ENST00000381897 HMG20BQ9P0W2 317 aa6.49□□□□□ -1.37
RFC1-202ENST00000381897 HSPA4P34932 840 aa6.49□□□□□ -1.37
RFC1-202ENST00000381897 CPLX2Q6PUV4 134 aaKnown RBP6.49□□□□□ -1.37
RFC1-202ENST00000381897 CWC27Q6UX04 472 aaKnown RBP6.49□□□□□ -1.37
RFC1-202ENST00000381897 NT5DC4Q86YG4 428 aa6.49□□□□□ -1.37
RFC1-202ENST00000381897 C14orf93Q9H972 538 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms