RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 ARAP2Q8WZ64 1704 aa17.87■□□□□ 0.45
SHOX-202ENST00000381575 AOX1Q06278 1338 aa17.87■□□□□ 0.45
SHOX-202ENST00000381575 TRPA1O75762 1119 aa17.87■□□□□ 0.45
SHOX-202ENST00000381575 SLFN5Q08AF3 891 aa17.87■□□□□ 0.45
SHOX-202ENST00000381575 ZBED3Q96IU2 234 aaPredicted RBP17.87■□□□□ 0.45
SHOX-202ENST00000381575 FZD1Q9UP38 647 aa17.87■□□□□ 0.45
SHOX-202ENST00000381575 IL1R1P14778 569 aa17.86■□□□□ 0.45
SHOX-202ENST00000381575 GYG1P46976 350 aa17.86■□□□□ 0.45
SHOX-202ENST00000381575 MKRN3Q13064 507 aaKnown RBP17.86■□□□□ 0.45
SHOX-202ENST00000381575 ANKRD44Q8N8A2 993 aa17.86■□□□□ 0.45
SHOX-202ENST00000381575 CSRNP1Q96S65 589 aa17.86■□□□□ 0.45
SHOX-202ENST00000381575 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.86■□□□□ 0.45
SHOX-202ENST00000381575 UTYO14607 1347 aa17.85■□□□□ 0.45
SHOX-202ENST00000381575 CLRN2A0PK11 232 aa17.85■□□□□ 0.45
SHOX-202ENST00000381575 FKBP1BP68106 108 aa17.85■□□□□ 0.45
SHOX-202ENST00000381575 DLGAP5Q15398 846 aa17.85■□□□□ 0.45
SHOX-202ENST00000381575 KLHDC4Q8TBB5 520 aa17.85■□□□□ 0.45
SHOX-202ENST00000381575 MCOLN1Q9GZU1 580 aa17.85■□□□□ 0.45
SHOX-202ENST00000381575 RNF186Q9NXI6 227 aa17.85■□□□□ 0.45
SHOX-202ENST00000381575 MYH13Q9UKX3 1938 aa17.84■□□□□ 0.45
SHOX-202ENST00000381575 CCDC85CA6NKD9 419 aa17.84■□□□□ 0.45
SHOX-202ENST00000381575 CFAP100Q494V2 611 aa17.84■□□□□ 0.45
SHOX-202ENST00000381575 LRRC24Q50LG9 513 aa17.84■□□□□ 0.45
SHOX-202ENST00000381575 APOBEC3FQ8IUX4 373 aaKnown RBP17.84■□□□□ 0.45
SHOX-202ENST00000381575 PTPRCP08575 1304 aa17.84■□□□□ 0.45
SHOX-202ENST00000381575 DGKZQ13574 1117 aa17.83■□□□□ 0.45
SHOX-202ENST00000381575 IQSEC3Q9UPP2 1182 aaPredicted RBP17.83■□□□□ 0.45
SHOX-202ENST00000381575 RIPOR2Q9Y4F9 1068 aa17.83■□□□□ 0.45
SHOX-202ENST00000381575 NF2P35240 595 aa17.82■□□□□ 0.44
SHOX-202ENST00000381575 RBM5P52756 815 aaKnown RBP eCLIP17.82■□□□□ 0.44
SHOX-202ENST00000381575 RABL6Q3YEC7 729 aaPredicted RBP17.82■□□□□ 0.44
SHOX-202ENST00000381575 FAM84BQ96KN1 310 aaPredicted RBP17.82■□□□□ 0.44
SHOX-202ENST00000381575 VEZTQ9HBM0 779 aa17.82■□□□□ 0.44
SHOX-202ENST00000381575 SMC4Q9NTJ3 1288 aa17.82■□□□□ 0.44
SHOX-202ENST00000381575 SSC5DA1L4H1 1573 aa17.82■□□□□ 0.44
SHOX-202ENST00000381575 SPDYE2BA6NHP3 402 aa17.81■□□□□ 0.44
SHOX-202ENST00000381575 SPDYE6P0CI01 402 aa17.81■□□□□ 0.44
SHOX-202ENST00000381575 HIBADHP31937 336 aaKnown RBP17.81■□□□□ 0.44
SHOX-202ENST00000381575 PTPN12Q05209 780 aaKnown RBP17.81■□□□□ 0.44
SHOX-202ENST00000381575 UBE4AQ14139 1066 aa17.81■□□□□ 0.44
SHOX-202ENST00000381575 PRMT6Q96LA8 375 aaPredicted RBP17.81■□□□□ 0.44
SHOX-202ENST00000381575 USP44Q9H0E7 712 aa17.81■□□□□ 0.44
SHOX-202ENST00000381575 DEFB129Q9H1M3 183 aa17.81■□□□□ 0.44
SHOX-202ENST00000381575 SAGE1Q9NXZ1 904 aa17.81■□□□□ 0.44
SHOX-202ENST00000381575 OTOFQ9HC10 1997 aa17.81■□□□□ 0.44
SHOX-202ENST00000381575 MMP14P50281 582 aa17.8■□□□□ 0.44
SHOX-202ENST00000381575 METTL24Q5JXM2 366 aa17.8■□□□□ 0.44
SHOX-202ENST00000381575 MFSD14BQ5SR56 506 aa17.8■□□□□ 0.44
SHOX-202ENST00000381575 MTMR14Q8NCE2 650 aa17.8■□□□□ 0.44
SHOX-202ENST00000381575 TDRD7Q8NHU6 1098 aaKnown RBP17.8■□□□□ 0.44
SHOX-202ENST00000381575 ANGEL1Q9UNK9 670 aaKnown RBP17.8■□□□□ 0.44
SHOX-202ENST00000381575 CHAF1AQ13111 956 aaPredicted RBP17.79■□□□□ 0.44
SHOX-202ENST00000381575 GRIK5Q16478 980 aa17.79■□□□□ 0.44
SHOX-202ENST00000381575 FAM205AQ6ZU69 1335 aa17.79■□□□□ 0.44
SHOX-202ENST00000381575 MROH5Q6ZUA9 1318 aa17.79■□□□□ 0.44
SHOX-202ENST00000381575 COL1A1P02452 1464 aaPredicted RBP17.79■□□□□ 0.44
SHOX-202ENST00000381575 FKBP1AP62942 108 aaKnown RBP17.79■□□□□ 0.44
SHOX-202ENST00000381575 ARMC9Q7Z3E5 817 aa17.79■□□□□ 0.44
SHOX-202ENST00000381575 TTF2Q9UNY4 1162 aaKnown RBP17.79■□□□□ 0.44
SHOX-202ENST00000381575 ALDH1L2Q3SY69 923 aa17.78■□□□□ 0.44
SHOX-202ENST00000381575 VPS37DQ86XT2 251 aa17.78■□□□□ 0.44
SHOX-202ENST00000381575 VGLL2Q8N8G2 317 aa17.78■□□□□ 0.44
SHOX-202ENST00000381575 CLMNQ96JQ2 1002 aa17.78■□□□□ 0.44
SHOX-202ENST00000381575 MYO1BO43795 1136 aa17.77■□□□□ 0.43
SHOX-202ENST00000381575 TBC1D8O95759 1140 aa17.77■□□□□ 0.43
SHOX-202ENST00000381575 NBPF12Q5TAG4 269 aaPredicted RBP17.77■□□□□ 0.43
SHOX-202ENST00000381575 TRMT2AQ8IZ69 625 aaKnown RBP17.77■□□□□ 0.43
SHOX-202ENST00000381575 TNRC18O15417 2968 aaPredicted RBP17.76■□□□□ 0.43
SHOX-202ENST00000381575 BCAMP50895 628 aa17.76■□□□□ 0.43
SHOX-202ENST00000381575 LDLRAD1Q5T700 205 aa17.76■□□□□ 0.43
SHOX-202ENST00000381575 FBXO33Q7Z6M2 555 aa17.76■□□□□ 0.43
SHOX-202ENST00000381575 CDAN1Q8IWY9 1227 aa17.76■□□□□ 0.43
SHOX-202ENST00000381575 TDRD3Q9H7E2 651 aaKnown RBP17.76■□□□□ 0.43
SHOX-202ENST00000381575 NOB1Q9ULX3 412 aaKnown RBP17.76■□□□□ 0.43
SHOX-202ENST00000381575 FRAT2O75474 233 aaPredicted RBP17.75■□□□□ 0.43
SHOX-202ENST00000381575 PDE8BO95263 885 aa17.75■□□□□ 0.43
SHOX-202ENST00000381575 RASA3Q14644 834 aa17.75■□□□□ 0.43
SHOX-202ENST00000381575 ZNF70Q9UC06 446 aaPredicted RBP17.75■□□□□ 0.43
SHOX-202ENST00000381575 RFX5P48382 616 aaPredicted RBP17.74■□□□□ 0.43
SHOX-202ENST00000381575 SPDYE2Q495Y8 402 aa17.74■□□□□ 0.43
SHOX-202ENST00000381575 SPRYD7Q5W111 196 aa17.74■□□□□ 0.43
SHOX-202ENST00000381575 REM2Q8IYK8 340 aaPredicted RBP17.74■□□□□ 0.43
SHOX-202ENST00000381575 DZIP1LQ8IYY4 767 aaKnown RBP17.74■□□□□ 0.43
SHOX-202ENST00000381575 SIL1Q9H173 461 aa17.74■□□□□ 0.43
SHOX-202ENST00000381575 LAMB1P07942 1786 aa17.73■□□□□ 0.43
SHOX-202ENST00000381575 TCP10L2B9ZVM9 353 aa17.73■□□□□ 0.43
SHOX-202ENST00000381575 CRKP46108 304 aa17.73■□□□□ 0.43
SHOX-202ENST00000381575 CAVIN4Q5BKX8 364 aa17.73■□□□□ 0.43
SHOX-202ENST00000381575 R3HDMLQ9H3Y0 253 aa17.73■□□□□ 0.43
SHOX-202ENST00000381575 SERPINA10Q9UK55 444 aa17.73■□□□□ 0.43
SHOX-202ENST00000381575 PPP2R3BQ9Y5P8 575 aa17.73■□□□□ 0.43
SHOX-202ENST00000381575 PDE4DIPQ5VU43 2346 aa17.72■□□□□ 0.43
SHOX-202ENST00000381575 EYA2O00167 538 aa17.72■□□□□ 0.43
SHOX-202ENST00000381575 PPP1R12BO60237 982 aaPredicted RBP17.72■□□□□ 0.43
SHOX-202ENST00000381575 UBTFL1P0CB47 393 aaPredicted RBP17.72■□□□□ 0.43
SHOX-202ENST00000381575 TM4SF4P48230 202 aa17.72■□□□□ 0.43
SHOX-202ENST00000381575 CACNB3P54284 484 aa17.72■□□□□ 0.43
SHOX-202ENST00000381575 PUM3Q15397 648 aaKnown RBP17.72■□□□□ 0.43
SHOX-202ENST00000381575 SLC10A4Q96EP9 437 aa17.72■□□□□ 0.43
SHOX-202ENST00000381575 AK9Q5TCS8 1911 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms