RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 SLIT1O75093 1534 aa12.78□□□□□ -0.36
DNMT3A-203ENST00000380746 ZNF532Q9HCE3 1301 aa12.78□□□□□ -0.36
DNMT3A-203ENST00000380746 MBD4O95243 580 aa12.78□□□□□ -0.36
DNMT3A-203ENST00000380746 AOPEPQ8N6M6 819 aa12.78□□□□□ -0.36
DNMT3A-203ENST00000380746 CCDC69A6NI79 296 aa12.77□□□□□ -0.36
DNMT3A-203ENST00000380746 UBE2Q2LH0YL09 131 aa12.77□□□□□ -0.36
DNMT3A-203ENST00000380746 PRKAB2O43741 272 aa12.77□□□□□ -0.36
DNMT3A-203ENST00000380746 PDIA3P30101 505 aaKnown RBP12.77□□□□□ -0.36
DNMT3A-203ENST00000380746 METAP2P50579 478 aaKnown RBP eCLIP12.77□□□□□ -0.36
DNMT3A-203ENST00000380746 BCAMP50895 628 aa12.77□□□□□ -0.36
DNMT3A-203ENST00000380746 PLCD3Q8N3E9 789 aa12.77□□□□□ -0.36
DNMT3A-203ENST00000380746 WWC3Q9ULE0 1092 aa12.77□□□□□ -0.36
DNMT3A-203ENST00000380746 FER1L4A9Z1Z3 1794 aa12.77□□□□□ -0.37
DNMT3A-203ENST00000380746 NSUN7Q8NE18 718 aaKnown RBP12.77□□□□□ -0.37
DNMT3A-203ENST00000380746 ALG1Q9BT22 464 aa12.77□□□□□ -0.37
DNMT3A-203ENST00000380746 GOLGA8AA7E2F4 631 aa12.76□□□□□ -0.37
DNMT3A-203ENST00000380746 RANBP6O60518 1105 aaKnown RBP12.76□□□□□ -0.37
DNMT3A-203ENST00000380746 HMGB1P09429 215 aaKnown RBP12.76□□□□□ -0.37
DNMT3A-203ENST00000380746 ARID5BQ14865 1188 aa12.76□□□□□ -0.37
DNMT3A-203ENST00000380746 ERICH2A1L162 156 aa12.76□□□□□ -0.37
DNMT3A-203ENST00000380746 AP5Z1O43299 807 aa12.76□□□□□ -0.37
DNMT3A-203ENST00000380746 RAD21O60216 631 aa12.76□□□□□ -0.37
DNMT3A-203ENST00000380746 AKAP17AQ02040 695 aaKnown RBP12.76□□□□□ -0.37
DNMT3A-203ENST00000380746 ZMYM1Q5SVZ6 1142 aa12.76□□□□□ -0.37
DNMT3A-203ENST00000380746 ATG3Q9NT62 314 aa12.76□□□□□ -0.37
DNMT3A-203ENST00000380746 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.76□□□□□ -0.37
DNMT3A-203ENST00000380746 CLIC4Q9Y696 253 aa12.76□□□□□ -0.37
DNMT3A-203ENST00000380746 COL15A1P39059 1388 aa12.76□□□□□ -0.37
DNMT3A-203ENST00000380746 ERVV-2B6SEH9 535 aa12.76□□□□□ -0.37
DNMT3A-203ENST00000380746 MCAMP43121 646 aa12.76□□□□□ -0.37
DNMT3A-203ENST00000380746 DDX19AQ9NUU7 478 aaKnown RBP12.76□□□□□ -0.37
DNMT3A-203ENST00000380746 MRVI1Q9Y6F6 885 aa12.76□□□□□ -0.37
DNMT3A-203ENST00000380746 PES1O00541 588 aaKnown RBP12.75□□□□□ -0.37
DNMT3A-203ENST00000380746 LMOD1P29536 600 aaPredicted RBP12.75□□□□□ -0.37
DNMT3A-203ENST00000380746 IGHMBP2P38935 993 aaKnown RBP12.75□□□□□ -0.37
DNMT3A-203ENST00000380746 HMGN5P82970 282 aaKnown RBP12.75□□□□□ -0.37
DNMT3A-203ENST00000380746 HELLSQ9NRZ9 838 aa12.75□□□□□ -0.37
DNMT3A-203ENST00000380746 TCHHQ07283 1943 aa12.75□□□□□ -0.37
DNMT3A-203ENST00000380746 DHX16O60231 1041 aaKnown RBP12.75□□□□□ -0.37
DNMT3A-203ENST00000380746 TPM2P07951 284 aa12.75□□□□□ -0.37
DNMT3A-203ENST00000380746 RASSF8Q8NHQ8 419 aa12.75□□□□□ -0.37
DNMT3A-203ENST00000380746 SDR42E1Q8WUS8 393 aa12.75□□□□□ -0.37
DNMT3A-203ENST00000380746 SENP2Q9HC62 589 aa12.75□□□□□ -0.37
DNMT3A-203ENST00000380746 SLC4A4Q9Y6R1 1079 aa12.75□□□□□ -0.37
DNMT3A-203ENST00000380746 WTIPA6NIX2 430 aaPredicted RBP12.75□□□□□ -0.37
DNMT3A-203ENST00000380746 CCDC102BQ68D86 513 aa12.75□□□□□ -0.37
DNMT3A-203ENST00000380746 PIH1D3Q9NQM4 214 aaKnown RBP12.75□□□□□ -0.37
DNMT3A-203ENST00000380746 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.75□□□□□ -0.37
DNMT3A-203ENST00000380746 KCNJ14Q9UNX9 436 aa12.75□□□□□ -0.37
DNMT3A-203ENST00000380746 SLC12A7Q9Y666 1083 aa12.75□□□□□ -0.37
DNMT3A-203ENST00000380746 NWD1Q149M9 1564 aa12.74□□□□□ -0.37
DNMT3A-203ENST00000380746 DDB1Q16531 1140 aa12.74□□□□□ -0.37
DNMT3A-203ENST00000380746 C11orf57Q6ZUT1 292 aaPredicted RBP12.74□□□□□ -0.37
DNMT3A-203ENST00000380746 USP42Q9H9J4 1324 aaKnown RBP12.74□□□□□ -0.37
DNMT3A-203ENST00000380746 KLHL10Q6JEL2 608 aa12.74□□□□□ -0.37
DNMT3A-203ENST00000380746 NLRP10Q86W26 655 aa12.74□□□□□ -0.37
DNMT3A-203ENST00000380746 APPBP2Q92624 585 aa12.74□□□□□ -0.37
DNMT3A-203ENST00000380746 SPDYE4A6NLX3 237 aa12.74□□□□□ -0.37
DNMT3A-203ENST00000380746 CDK11BP21127 795 aaKnown RBP12.74□□□□□ -0.37
DNMT3A-203ENST00000380746 CYP7A1P22680 504 aa12.74□□□□□ -0.37
DNMT3A-203ENST00000380746 IARSP41252 1262 aaKnown RBP12.74□□□□□ -0.37
DNMT3A-203ENST00000380746 GYG1P46976 350 aa12.74□□□□□ -0.37
DNMT3A-203ENST00000380746 MAP3K12Q12852 859 aa12.74□□□□□ -0.37
DNMT3A-203ENST00000380746 RABL6Q3YEC7 729 aaPredicted RBP12.74□□□□□ -0.37
DNMT3A-203ENST00000380746 ZBTB38Q8NAP3 1195 aaPredicted RBP12.74□□□□□ -0.37
DNMT3A-203ENST00000380746 TTLL11Q8NHH1 800 aa12.74□□□□□ -0.37
DNMT3A-203ENST00000380746 CTSWP56202 376 aa12.73□□□□□ -0.37
DNMT3A-203ENST00000380746 HOMER1Q86YM7 354 aa12.73□□□□□ -0.37
DNMT3A-203ENST00000380746 CLIC6Q96NY7 704 aa12.73□□□□□ -0.37
DNMT3A-203ENST00000380746 CARD10Q9BWT7 1032 aa12.73□□□□□ -0.37
DNMT3A-203ENST00000380746 PDLIM2Q96JY6 352 aa12.73□□□□□ -0.37
DNMT3A-203ENST00000380746 UBAC1Q9BSL1 405 aa12.73□□□□□ -0.37
DNMT3A-203ENST00000380746 ZSCAN16Q9H4T2 348 aaPredicted RBP12.73□□□□□ -0.37
DNMT3A-203ENST00000380746 TFCP2L1Q9NZI6 479 aa12.73□□□□□ -0.37
DNMT3A-203ENST00000380746 CYP2D7A0A087X1C5 515 aa12.73□□□□□ -0.37
DNMT3A-203ENST00000380746 ZBTB43O43298 467 aa12.73□□□□□ -0.37
DNMT3A-203ENST00000380746 SLC5A1P13866 664 aa12.73□□□□□ -0.37
DNMT3A-203ENST00000380746 RESTQ13127 1097 aa12.73□□□□□ -0.37
DNMT3A-203ENST00000380746 CEP57L1Q8IYX8 460 aa12.73□□□□□ -0.37
DNMT3A-203ENST00000380746 CCAR2Q8N163 923 aaKnown RBP12.73□□□□□ -0.37
DNMT3A-203ENST00000380746 KCNQ2O43526 872 aa12.72□□□□□ -0.37
DNMT3A-203ENST00000380746 PFKFB2O60825 505 aa12.72□□□□□ -0.37
DNMT3A-203ENST00000380746 IGSF3O75054 1194 aa12.72□□□□□ -0.37
DNMT3A-203ENST00000380746 CTDNEP1O95476 244 aa12.72□□□□□ -0.37
DNMT3A-203ENST00000380746 SERPINC1P01008 464 aa12.72□□□□□ -0.37
DNMT3A-203ENST00000380746 SAFBQ15424 915 aaKnown RBP eCLIP12.72□□□□□ -0.37
DNMT3A-203ENST00000380746 GOLPH3LQ9H4A5 285 aa12.72□□□□□ -0.37
DNMT3A-203ENST00000380746 CLSTN2Q9H4D0 955 aa12.72□□□□□ -0.37
DNMT3A-203ENST00000380746 RGPD2P0DJD1 1756 aa12.72□□□□□ -0.37
DNMT3A-203ENST00000380746 GOLGB1Q14789 3259 aaKnown RBP12.72□□□□□ -0.37
DNMT3A-203ENST00000380746 SPTLC2O15270 562 aa12.72□□□□□ -0.37
DNMT3A-203ENST00000380746 SLC3A2P08195 630 aaKnown RBP12.72□□□□□ -0.37
DNMT3A-203ENST00000380746 GIGYF2Q6Y7W6 1299 aaKnown RBP12.72□□□□□ -0.37
DNMT3A-203ENST00000380746 PCDHA7Q9UN72 937 aa12.72□□□□□ -0.37
DNMT3A-203ENST00000380746 MED23Q9ULK4 1368 aa12.72□□□□□ -0.37
DNMT3A-203ENST00000380746 UTYO14607 1347 aa12.72□□□□□ -0.37
DNMT3A-203ENST00000380746 PDE6AP16499 860 aa12.71□□□□□ -0.37
DNMT3A-203ENST00000380746 NDUFA8P51970 172 aa12.71□□□□□ -0.37
DNMT3A-203ENST00000380746 CBX1P83916 185 aa12.71□□□□□ -0.37
DNMT3A-203ENST00000380746 UVSSAQ2YD98 709 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms