RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 SCARF1Q14162 830 aa15.51■□□□□ 0.07
SMN1-202ENST00000380707 TTC39AQ5SRH9 613 aa15.51■□□□□ 0.07
SMN1-202ENST00000380707 TTLL5Q6EMB2 1281 aa15.51■□□□□ 0.07
SMN1-202ENST00000380707 USP17L1Q7RTZ2 530 aa15.51■□□□□ 0.07
SMN1-202ENST00000380707 CNKSR2Q8WXI2 1034 aa15.51■□□□□ 0.07
SMN1-202ENST00000380707 SALL3Q9BXA9 1300 aa15.5■□□□□ 0.07
SMN1-202ENST00000380707 ZC3H4Q9UPT8 1303 aaKnown RBP15.5■□□□□ 0.07
SMN1-202ENST00000380707 COL1A1P02452 1464 aaPredicted RBP15.5■□□□□ 0.07
SMN1-202ENST00000380707 MCAMP43121 646 aa15.5■□□□□ 0.07
SMN1-202ENST00000380707 TSHZ3Q63HK5 1081 aa15.5■□□□□ 0.07
SMN1-202ENST00000380707 CIAPIN1Q6FI81 312 aa15.5■□□□□ 0.07
SMN1-202ENST00000380707 PI16Q6UXB8 463 aa15.5■□□□□ 0.07
SMN1-202ENST00000380707 FBXW7Q969H0 707 aa15.5■□□□□ 0.07
SMN1-202ENST00000380707 ZNF512BQ96KM6 892 aaPredicted RBP15.5■□□□□ 0.07
SMN1-202ENST00000380707 MXD3Q9BW11 206 aa15.5■□□□□ 0.07
SMN1-202ENST00000380707 FAM205AQ6ZU69 1335 aa15.5■□□□□ 0.07
SMN1-202ENST00000380707 ZBTB22O15209 634 aa15.49■□□□□ 0.07
SMN1-202ENST00000380707 VIL1P09327 827 aaKnown RBP15.49■□□□□ 0.07
SMN1-202ENST00000380707 UQCRFS1P1P0C7P4 283 aa15.49■□□□□ 0.07
SMN1-202ENST00000380707 CHAF1AQ13111 956 aaPredicted RBP15.49■□□□□ 0.07
SMN1-202ENST00000380707 TNIP1Q15025 636 aa15.49■□□□□ 0.07
SMN1-202ENST00000380707 DACT2Q5SW24 774 aa15.49■□□□□ 0.07
SMN1-202ENST00000380707 STRIP1Q5VSL9 837 aa15.49■□□□□ 0.07
SMN1-202ENST00000380707 HMG20BQ9P0W2 317 aa15.49■□□□□ 0.07
SMN1-202ENST00000380707 DENND2AQ9ULE3 1009 aa15.49■□□□□ 0.07
SMN1-202ENST00000380707 SEMA3EO15041 775 aa15.48■□□□□ 0.07
SMN1-202ENST00000380707 DDNO94850 711 aaPredicted RBP15.48■□□□□ 0.07
SMN1-202ENST00000380707 MX1P20591 662 aa15.48■□□□□ 0.07
SMN1-202ENST00000380707 PDE4AP27815 886 aa15.48■□□□□ 0.07
SMN1-202ENST00000380707 SPATA5Q8NB90 893 aa15.48■□□□□ 0.07
SMN1-202ENST00000380707 SNRKQ9NRH2 765 aa15.48■□□□□ 0.07
SMN1-202ENST00000380707 ECHDC1Q9NTX5 307 aa15.48■□□□□ 0.07
SMN1-202ENST00000380707 ZBTB12Q9Y330 459 aaPredicted RBP15.48■□□□□ 0.07
SMN1-202ENST00000380707 GJA3Q9Y6H8 435 aa15.48■□□□□ 0.07
SMN1-202ENST00000380707 NDUFB9Q9Y6M9 179 aa15.48■□□□□ 0.07
SMN1-202ENST00000380707 ATP5JP18859 108 aa15.48■□□□□ 0.07
SMN1-202ENST00000380707 DPY19L2Q6NUT2 758 aa15.48■□□□□ 0.07
SMN1-202ENST00000380707 GPC2Q8N158 579 aa15.48■□□□□ 0.07
SMN1-202ENST00000380707 CERS5Q8N5B7 392 aa15.48■□□□□ 0.07
SMN1-202ENST00000380707 GTF3C3Q9Y5Q9 886 aa15.48■□□□□ 0.07
SMN1-202ENST00000380707 ZNF646O15015 1829 aaPredicted RBP15.47■□□□□ 0.07
SMN1-202ENST00000380707 GLTPD2A6NH11 291 aa15.47■□□□□ 0.07
SMN1-202ENST00000380707 PDE1AP54750 535 aa15.47■□□□□ 0.07
SMN1-202ENST00000380707 MFSD14BQ5SR56 506 aa15.47■□□□□ 0.07
SMN1-202ENST00000380707 RSBN1LQ6PCB5 846 aaPredicted RBP15.47■□□□□ 0.07
SMN1-202ENST00000380707 SKAP1Q86WV1 359 aa15.47■□□□□ 0.07
SMN1-202ENST00000380707 PLEKHM2Q8IWE5 1019 aa15.47■□□□□ 0.07
SMN1-202ENST00000380707 GPATCH3Q96I76 525 aa15.47■□□□□ 0.07
SMN1-202ENST00000380707 BOLA2Q9H3K6 86 aa15.47■□□□□ 0.07
SMN1-202ENST00000380707 STAP2Q9UGK3 403 aa15.47■□□□□ 0.07
SMN1-202ENST00000380707 PDS5AQ29RF7 1337 aaKnown RBP15.46■□□□□ 0.07
SMN1-202ENST00000380707 TTC41PQ6P2S7 1318 aa15.46■□□□□ 0.07
SMN1-202ENST00000380707 PSME4Q14997 1843 aa15.46■□□□□ 0.07
SMN1-202ENST00000380707 ZAP70P43403 619 aa15.46■□□□□ 0.07
SMN1-202ENST00000380707 WDR66Q8TBY9 1149 aa15.46■□□□□ 0.07
SMN1-202ENST00000380707 PI4K2BQ8TCG2 481 aa15.46■□□□□ 0.07
SMN1-202ENST00000380707 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.46■□□□□ 0.07
SMN1-202ENST00000380707 GMLQ99445 158 aa15.46■□□□□ 0.07
SMN1-202ENST00000380707 AKAP11Q9UKA4 1901 aa15.46■□□□□ 0.06
SMN1-202ENST00000380707 CYP2E1P05181 493 aaPredicted RBP15.45■□□□□ 0.06
SMN1-202ENST00000380707 GMPSP49915 693 aaPredicted RBP15.45■□□□□ 0.06
SMN1-202ENST00000380707 GRIK5Q16478 980 aa15.45■□□□□ 0.06
SMN1-202ENST00000380707 TBC1D9Q6ZT07 1266 aa15.45■□□□□ 0.06
SMN1-202ENST00000380707 MYH13Q9UKX3 1938 aa15.45■□□□□ 0.06
SMN1-202ENST00000380707 FKBP1AP62942 108 aaKnown RBP15.44■□□□□ 0.06
SMN1-202ENST00000380707 AGBL3Q8NEM8 1001 aa15.44■□□□□ 0.06
SMN1-202ENST00000380707 TBC1D22AQ8WUA7 517 aa15.44■□□□□ 0.06
SMN1-202ENST00000380707 DNAJC2Q99543 621 aaKnown RBP15.44■□□□□ 0.06
SMN1-202ENST00000380707 HAUS7Q99871 368 aa15.44■□□□□ 0.06
SMN1-202ENST00000380707 SALL1Q9NSC2 1324 aa15.44■□□□□ 0.06
SMN1-202ENST00000380707 ERC2O15083 957 aa15.43■□□□□ 0.06
SMN1-202ENST00000380707 RPS12P25398 132 aaKnown RBP15.43■□□□□ 0.06
SMN1-202ENST00000380707 SCNN1DP51172 638 aa15.43■□□□□ 0.06
SMN1-202ENST00000380707 KIAA0825Q8IV33 1275 aa15.43■□□□□ 0.06
SMN1-202ENST00000380707 EDC3Q96F86 508 aaKnown RBP15.43■□□□□ 0.06
SMN1-202ENST00000380707 OSBPL3Q9H4L5 887 aa15.43■□□□□ 0.06
SMN1-202ENST00000380707 ANTXR1Q9H6X2 564 aa15.43■□□□□ 0.06
SMN1-202ENST00000380707 ABCF2Q9UG63 623 aa15.43■□□□□ 0.06
SMN1-202ENST00000380707 MYO3BQ8WXR4 1341 aa15.43■□□□□ 0.06
SMN1-202ENST00000380707 SHTN1A0MZ66 631 aa15.43■□□□□ 0.06
SMN1-202ENST00000380707 F8W031 263 aaPredicted RBP15.43■□□□□ 0.06
SMN1-202ENST00000380707 GOLIM4O00461 696 aa15.43■□□□□ 0.06
SMN1-202ENST00000380707 GLRX3O76003 335 aaKnown RBP15.43■□□□□ 0.06
SMN1-202ENST00000380707 PRDX5P30044 214 aa15.43■□□□□ 0.06
SMN1-202ENST00000380707 DPF2Q92785 391 aa15.43■□□□□ 0.06
SMN1-202ENST00000380707 L3MBTL3Q96JM7 780 aaPredicted RBP15.43■□□□□ 0.06
SMN1-202ENST00000380707 PIH1D3Q9NQM4 214 aaKnown RBP15.43■□□□□ 0.06
SMN1-202ENST00000380707 MAP4K4O95819 1239 aaPredicted RBP15.42■□□□□ 0.06
SMN1-202ENST00000380707 ZNF526Q8TF50 670 aaPredicted RBP15.42■□□□□ 0.06
SMN1-202ENST00000380707 PAG1Q9NWQ8 432 aa15.42■□□□□ 0.06
SMN1-202ENST00000380707 GPRC5DQ9NZD1 345 aa15.42■□□□□ 0.06
SMN1-202ENST00000380707 CNOT7Q9UIV1 285 aaKnown RBP15.42■□□□□ 0.06
SMN1-202ENST00000380707 AOX1Q06278 1338 aa15.41■□□□□ 0.06
SMN1-202ENST00000380707 POTECB2RU33 542 aa15.41■□□□□ 0.06
SMN1-202ENST00000380707 LDHBP07195 334 aaKnown RBP15.41■□□□□ 0.06
SMN1-202ENST00000380707 USP17L8P0C7I0 530 aa15.41■□□□□ 0.06
SMN1-202ENST00000380707 EPS15P42566 896 aa15.41■□□□□ 0.06
SMN1-202ENST00000380707 MICALL2Q8IY33 904 aa15.41■□□□□ 0.06
SMN1-202ENST00000380707 ZGPATQ8N5A5 531 aaKnown RBP15.41■□□□□ 0.06
SMN1-202ENST00000380707 TTF2Q9UNY4 1162 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms