RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 E4F1Q66K89 784 aaPredicted RBP8.64□□□□□ -1.03
CDKL5-201ENST00000379989 PLEKHM2Q8IWE5 1019 aa8.64□□□□□ -1.03
CDKL5-201ENST00000379989 FAN1Q9Y2M0 1017 aa8.64□□□□□ -1.03
CDKL5-201ENST00000379989 NHSL1Q5SYE7 1610 aa8.64□□□□□ -1.03
CDKL5-201ENST00000379989 KINO60870 393 aaKnown RBP8.64□□□□□ -1.03
CDKL5-201ENST00000379989 FAM163BP0C2L3 166 aa8.64□□□□□ -1.03
CDKL5-201ENST00000379989 MCM2P49736 904 aa8.64□□□□□ -1.03
CDKL5-201ENST00000379989 LONRF2Q1L5Z9 754 aa8.64□□□□□ -1.03
CDKL5-201ENST00000379989 TTC22Q5TAA0 569 aa8.64□□□□□ -1.03
CDKL5-201ENST00000379989 ZKSCAN4Q969J2 545 aaPredicted RBP8.64□□□□□ -1.03
CDKL5-201ENST00000379989 CARD6Q9BX69 1037 aa8.64□□□□□ -1.03
CDKL5-201ENST00000379989 SRGAP3O43295 1099 aa8.63□□□□□ -1.03
CDKL5-201ENST00000379989 N4BP1O75113 896 aaKnown RBP8.63□□□□□ -1.03
CDKL5-201ENST00000379989 DDR1Q08345 913 aa8.63□□□□□ -1.03
CDKL5-201ENST00000379989 MAP3K11Q16584 847 aa8.63□□□□□ -1.03
CDKL5-201ENST00000379989 C1orf141Q5JVX7 400 aa8.63□□□□□ -1.03
CDKL5-201ENST00000379989 BAG1Q99933 345 aaPredicted RBP8.63□□□□□ -1.03
CDKL5-201ENST00000379989 FAM107BQ9H098 131 aa8.63□□□□□ -1.03
CDKL5-201ENST00000379989 BICC1Q9H694 974 aaKnown RBP8.63□□□□□ -1.03
CDKL5-201ENST00000379989 CPSF2Q9P2I0 782 aaKnown RBP8.63□□□□□ -1.03
CDKL5-201ENST00000379989 CHMLP26374 656 aa8.63□□□□□ -1.03
CDKL5-201ENST00000379989 NF2P35240 595 aa8.63□□□□□ -1.03
CDKL5-201ENST00000379989 RWDD2BP57060 319 aa8.63□□□□□ -1.03
CDKL5-201ENST00000379989 CLIC6Q96NY7 704 aa8.63□□□□□ -1.03
CDKL5-201ENST00000379989 SPG7Q9UQ90 795 aa8.63□□□□□ -1.03
CDKL5-201ENST00000379989 MAFGO15525 162 aa8.63□□□□□ -1.03
CDKL5-201ENST00000379989 MRPL12P52815 198 aaKnown RBP8.63□□□□□ -1.03
CDKL5-201ENST00000379989 PSMD2Q13200 908 aa8.63□□□□□ -1.03
CDKL5-201ENST00000379989 CCDC96Q2M329 555 aa8.63□□□□□ -1.03
CDKL5-201ENST00000379989 PREPLQ4J6C6 727 aaPredicted RBP8.63□□□□□ -1.03
CDKL5-201ENST00000379989 ARMC3Q5W041 872 aa8.63□□□□□ -1.03
CDKL5-201ENST00000379989 WWC2Q6AWC2 1192 aa8.63□□□□□ -1.03
CDKL5-201ENST00000379989 GPR161Q8N6U8 529 aaKnown RBP8.63□□□□□ -1.03
CDKL5-201ENST00000379989 KLHL23Q8NBE8 558 aa8.63□□□□□ -1.03
CDKL5-201ENST00000379989 CD248Q9HCU0 757 aa8.63□□□□□ -1.03
CDKL5-201ENST00000379989 USP16Q9Y5T5 823 aa8.63□□□□□ -1.03
CDKL5-201ENST00000379989 ERC2O15083 957 aa8.62□□□□□ -1.03
CDKL5-201ENST00000379989 FANCGO15287 622 aa8.62□□□□□ -1.03
CDKL5-201ENST00000379989 HMGB1P09429 215 aaKnown RBP8.62□□□□□ -1.03
CDKL5-201ENST00000379989 ZSCAN22P10073 491 aaPredicted RBP8.62□□□□□ -1.03
CDKL5-201ENST00000379989 TRAF1Q13077 416 aa8.62□□□□□ -1.03
CDKL5-201ENST00000379989 CAMK4Q16566 473 aa8.62□□□□□ -1.03
CDKL5-201ENST00000379989 TBC1D25Q3MII6 688 aa8.62□□□□□ -1.03
CDKL5-201ENST00000379989 HSP90AB4PQ58FF6 505 aa8.62□□□□□ -1.03
CDKL5-201ENST00000379989 SIRT2Q8IXJ6 389 aa8.62□□□□□ -1.03
CDKL5-201ENST00000379989 CNNM3Q8NE01 707 aa8.62□□□□□ -1.03
CDKL5-201ENST00000379989 PARD6BQ9BYG5 372 aa8.62□□□□□ -1.03
CDKL5-201ENST00000379989 SPATS2LQ9NUQ6 558 aaKnown RBP8.62□□□□□ -1.03
CDKL5-201ENST00000379989 RPS6KA3P51812 740 aa8.62□□□□□ -1.03
CDKL5-201ENST00000379989 PPP4R3CPQ6ZMV5 832 aa8.62□□□□□ -1.03
CDKL5-201ENST00000379989 CKAP2LQ8IYA6 745 aa8.62□□□□□ -1.03
CDKL5-201ENST00000379989 TSPYL6Q8N831 410 aa8.62□□□□□ -1.03
CDKL5-201ENST00000379989 ARMC2Q8NEN0 867 aa8.62□□□□□ -1.03
CDKL5-201ENST00000379989 MICAL1Q8TDZ2 1067 aa8.62□□□□□ -1.03
CDKL5-201ENST00000379989 MRFAP1L1Q96HT8 127 aa8.62□□□□□ -1.03
CDKL5-201ENST00000379989 OSBPL3Q9H4L5 887 aa8.62□□□□□ -1.03
CDKL5-201ENST00000379989 ODF2LQ9ULJ1 636 aa8.62□□□□□ -1.03
CDKL5-201ENST00000379989 SPATA31A3Q5VYP0 1347 aa8.62□□□□□ -1.03
CDKL5-201ENST00000379989 TRIM74Q86UV6 250 aa8.61□□□□□ -1.03
CDKL5-201ENST00000379989 TRIM73Q86UV7 250 aa8.61□□□□□ -1.03
CDKL5-201ENST00000379989 PARD3BQ8TEW8 1205 aa8.61□□□□□ -1.03
CDKL5-201ENST00000379989 CABS1Q96KC9 395 aa8.61□□□□□ -1.03
CDKL5-201ENST00000379989 C1orf115Q9H7X2 142 aa8.61□□□□□ -1.03
CDKL5-201ENST00000379989 COL15A1P39059 1388 aa8.61□□□□□ -1.03
CDKL5-201ENST00000379989 LAMB4A4D0S4 1761 aa8.61□□□□□ -1.03
CDKL5-201ENST00000379989 ICA1Q05084 483 aa8.61□□□□□ -1.03
CDKL5-201ENST00000379989 LRRFIP1Q32MZ4 808 aaKnown RBP8.61□□□□□ -1.03
CDKL5-201ENST00000379989 NUP62CLQ9H1M0 184 aa8.61□□□□□ -1.03
CDKL5-201ENST00000379989 DNAI1Q9UI46 699 aa8.61□□□□□ -1.03
CDKL5-201ENST00000379989 PHLPP2Q6ZVD8 1323 aa8.61□□□□□ -1.03
CDKL5-201ENST00000379989 RAB11FIP3O75154 756 aa8.61□□□□□ -1.03
CDKL5-201ENST00000379989 ALDH1L1O75891 902 aa8.61□□□□□ -1.03
CDKL5-201ENST00000379989 ZNF165P49910 485 aa8.61□□□□□ -1.03
CDKL5-201ENST00000379989 TEFQ10587 303 aa8.61□□□□□ -1.03
CDKL5-201ENST00000379989 DHX8Q14562 1220 aaKnown RBP8.61□□□□□ -1.03
CDKL5-201ENST00000379989 ISM2Q6H9L7 571 aa8.61□□□□□ -1.03
CDKL5-201ENST00000379989 TTC41PQ6P2S7 1318 aa8.61□□□□□ -1.03
CDKL5-201ENST00000379989 SARM1Q6SZW1 724 aa8.61□□□□□ -1.03
CDKL5-201ENST00000379989 IL17RAQ96F46 866 aa8.61□□□□□ -1.03
CDKL5-201ENST00000379989 GNAI2P04899 355 aa8.6□□□□□ -1.03
CDKL5-201ENST00000379989 FBLN1P23142 703 aa8.6□□□□□ -1.03
CDKL5-201ENST00000379989 ETF1P62495 437 aaKnown RBP8.6□□□□□ -1.03
CDKL5-201ENST00000379989 SNX1Q13596 522 aa8.6□□□□□ -1.03
CDKL5-201ENST00000379989 MCM6Q14566 821 aa8.6□□□□□ -1.03
CDKL5-201ENST00000379989 SKIDA1Q1XH10 827 aa8.6□□□□□ -1.03
CDKL5-201ENST00000379989 ANKRD24Q8TF21 1146 aa8.6□□□□□ -1.03
CDKL5-201ENST00000379989 DDX11Q96FC9 970 aa8.6□□□□□ -1.03
CDKL5-201ENST00000379989 FAM169AQ9Y6X4 670 aa8.6□□□□□ -1.03
CDKL5-201ENST00000379989 ABCA3Q99758 1704 aa8.6□□□□□ -1.03
CDKL5-201ENST00000379989 NUTM2FA1L443 756 aa8.6□□□□□ -1.03
CDKL5-201ENST00000379989 PSDA5PKW4 1024 aaPredicted RBP8.6□□□□□ -1.03
CDKL5-201ENST00000379989 CHUKO15111 745 aa8.6□□□□□ -1.03
CDKL5-201ENST00000379989 SKAP2O75563 359 aaPredicted RBP8.6□□□□□ -1.03
CDKL5-201ENST00000379989 SNUPNO95149 360 aaKnown RBP8.6□□□□□ -1.03
CDKL5-201ENST00000379989 F13A1P00488 732 aa8.6□□□□□ -1.03
CDKL5-201ENST00000379989 SLC4A2P04920 1241 aa8.6□□□□□ -1.03
CDKL5-201ENST00000379989 SDSP20132 328 aa8.6□□□□□ -1.03
CDKL5-201ENST00000379989 SLC5A9Q2M3M2 681 aa8.6□□□□□ -1.03
CDKL5-201ENST00000379989 WLSQ5T9L3 541 aa8.6□□□□□ -1.03
CDKL5-201ENST00000379989 RSRC2Q7L4I2 434 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms