RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 ECHDC1Q9NTX5 307 aa12.45□□□□□ -0.42
USP6NL-202ENST00000379237 BAIAP2L1Q9UHR4 511 aa12.45□□□□□ -0.42
USP6NL-202ENST00000379237 SNCBQ16143 134 aa12.45□□□□□ -0.42
USP6NL-202ENST00000379237 CCDC93Q567U6 631 aa12.45□□□□□ -0.42
USP6NL-202ENST00000379237 TEX11Q8IYF3 940 aa12.45□□□□□ -0.42
USP6NL-202ENST00000379237 TTC14Q96N46 770 aa12.45□□□□□ -0.42
USP6NL-202ENST00000379237 TRAPPC8Q9Y2L5 1435 aa12.45□□□□□ -0.42
USP6NL-202ENST00000379237 SPTLC2O15270 562 aa12.45□□□□□ -0.42
USP6NL-202ENST00000379237 CPLX2Q6PUV4 134 aaKnown RBP12.45□□□□□ -0.42
USP6NL-202ENST00000379237 ZSWIM6Q9HCJ5 1215 aa12.45□□□□□ -0.42
USP6NL-202ENST00000379237 DNAJC5BQ9UF47 199 aa12.45□□□□□ -0.42
USP6NL-202ENST00000379237 AKR1B15C9JRZ8 316 aaPredicted RBP12.45□□□□□ -0.42
USP6NL-202ENST00000379237 FCHSD1Q86WN1 690 aa12.45□□□□□ -0.42
USP6NL-202ENST00000379237 KCNG4Q8TDN1 519 aa12.45□□□□□ -0.42
USP6NL-202ENST00000379237 FANCLQ9NW38 375 aa12.45□□□□□ -0.42
USP6NL-202ENST00000379237 MYO1FO00160 1098 aa12.44□□□□□ -0.42
USP6NL-202ENST00000379237 PAX7P23759 505 aa12.44□□□□□ -0.42
USP6NL-202ENST00000379237 FLIIQ13045 1269 aa12.44□□□□□ -0.42
USP6NL-202ENST00000379237 LONRF3Q496Y0 759 aa12.44□□□□□ -0.42
USP6NL-202ENST00000379237 SPECC1Q5M775 1068 aa12.44□□□□□ -0.42
USP6NL-202ENST00000379237 TMED8Q6PL24 325 aaPredicted RBP12.44□□□□□ -0.42
USP6NL-202ENST00000379237 SND1Q7KZF4 910 aaKnown RBP eCLIP12.44□□□□□ -0.42
USP6NL-202ENST00000379237 G2E3Q7L622 706 aa12.44□□□□□ -0.42
USP6NL-202ENST00000379237 EVI5LQ96CN4 794 aa12.44□□□□□ -0.42
USP6NL-202ENST00000379237 TBC1D31Q96DN5 1066 aa12.44□□□□□ -0.42
USP6NL-202ENST00000379237 PTPRTO14522 1441 aa12.44□□□□□ -0.42
USP6NL-202ENST00000379237 NUP153P49790 1475 aaKnown RBP12.44□□□□□ -0.42
USP6NL-202ENST00000379237 IRX1P78414 480 aaPredicted RBP12.44□□□□□ -0.42
USP6NL-202ENST00000379237 MAP3K9P80192 1104 aa12.44□□□□□ -0.42
USP6NL-202ENST00000379237 NUTM2GQ5VZR2 741 aa12.44□□□□□ -0.42
USP6NL-202ENST00000379237 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.44□□□□□ -0.42
USP6NL-202ENST00000379237 VSNL1P62760 191 aa12.44□□□□□ -0.42
USP6NL-202ENST00000379237 PPFIA1Q13136 1202 aa12.44□□□□□ -0.42
USP6NL-202ENST00000379237 MAATS1Q7Z4T9 603 aa12.44□□□□□ -0.42
USP6NL-202ENST00000379237 HMGXB3Q12766 1538 aa12.44□□□□□ -0.42
USP6NL-202ENST00000379237 CUTAO60888 179 aa12.43□□□□□ -0.42
USP6NL-202ENST00000379237 ZNF202O95125 648 aa12.43□□□□□ -0.42
USP6NL-202ENST00000379237 IFT88Q13099 833 aa12.43□□□□□ -0.42
USP6NL-202ENST00000379237 TUBB2AQ13885 445 aa12.43□□□□□ -0.42
USP6NL-202ENST00000379237 CCDC50Q8IVM0 306 aa12.43□□□□□ -0.42
USP6NL-202ENST00000379237 ARMC2Q8NEN0 867 aa12.43□□□□□ -0.42
USP6NL-202ENST00000379237 SMARCC2Q8TAQ2 1214 aa12.43□□□□□ -0.42
USP6NL-202ENST00000379237 TUBB2BQ9BVA1 445 aa12.43□□□□□ -0.42
USP6NL-202ENST00000379237 IRX2Q9BZI1 471 aaPredicted RBP12.43□□□□□ -0.42
USP6NL-202ENST00000379237 TM6SF1Q9BZW5 370 aa12.43□□□□□ -0.42
USP6NL-202ENST00000379237 CCDC8Q9H0W5 538 aaPredicted RBP12.43□□□□□ -0.42
USP6NL-202ENST00000379237 PLB1Q6P1J6 1458 aa12.43□□□□□ -0.42
USP6NL-202ENST00000379237 EXOC5O00471 708 aa12.43□□□□□ -0.42
USP6NL-202ENST00000379237 NFATC2IPQ8NCF5 419 aa12.43□□□□□ -0.42
USP6NL-202ENST00000379237 RIN2Q8WYP3 895 aaPredicted RBP12.43□□□□□ -0.42
USP6NL-202ENST00000379237 RIPOR2Q9Y4F9 1068 aa12.43□□□□□ -0.42
USP6NL-202ENST00000379237 WDR62O43379 1518 aa12.43□□□□□ -0.42
USP6NL-202ENST00000379237 PTPDC1A2A3K4 754 aa12.43□□□□□ -0.42
USP6NL-202ENST00000379237 STX10O60499 249 aa12.43□□□□□ -0.42
USP6NL-202ENST00000379237 RPS6KB1P23443 525 aa12.43□□□□□ -0.42
USP6NL-202ENST00000379237 CKAP4Q07065 602 aaKnown RBP12.43□□□□□ -0.42
USP6NL-202ENST00000379237 CCDC102BQ68D86 513 aa12.43□□□□□ -0.42
USP6NL-202ENST00000379237 FAM43BQ6ZT52 329 aaPredicted RBP12.43□□□□□ -0.42
USP6NL-202ENST00000379237 NMIQ13287 307 aaPredicted RBP12.43□□□□□ -0.42
USP6NL-202ENST00000379237 SPECC1LQ69YQ0 1117 aa12.43□□□□□ -0.42
USP6NL-202ENST00000379237 CD109Q6YHK3 1445 aa12.42□□□□□ -0.42
USP6NL-202ENST00000379237 SLC27A2O14975 620 aa12.42□□□□□ -0.42
USP6NL-202ENST00000379237 NDUFA8P51970 172 aa12.42□□□□□ -0.42
USP6NL-202ENST00000379237 TOGARAM2Q6ZUX3 1019 aa12.42□□□□□ -0.42
USP6NL-202ENST00000379237 RASSF8Q8NHQ8 419 aa12.42□□□□□ -0.42
USP6NL-202ENST00000379237 DNMBPQ6XZF7 1577 aa12.42□□□□□ -0.42
USP6NL-202ENST00000379237 GCFC2P16383 781 aaKnown RBP12.42□□□□□ -0.42
USP6NL-202ENST00000379237 BEND6Q5SZJ8 279 aaPredicted RBP12.42□□□□□ -0.42
USP6NL-202ENST00000379237 KIRREL3Q8IZU9 778 aa12.42□□□□□ -0.42
USP6NL-202ENST00000379237 SLC35F6Q8N357 371 aa12.42□□□□□ -0.42
USP6NL-202ENST00000379237 TACO1Q9BSH4 297 aaKnown RBP12.42□□□□□ -0.42
USP6NL-202ENST00000379237 PTCH1Q13635 1447 aa12.42□□□□□ -0.42
USP6NL-202ENST00000379237 SOS1Q07889 1333 aaPredicted RBP12.42□□□□□ -0.42
USP6NL-202ENST00000379237 KIF3CO14782 793 aa12.42□□□□□ -0.42
USP6NL-202ENST00000379237 ATG3Q9NT62 314 aa12.42□□□□□ -0.42
USP6NL-202ENST00000379237 IFT140Q96RY7 1462 aa12.42□□□□□ -0.42
USP6NL-202ENST00000379237 KIF24Q5T7B8 1368 aa12.42□□□□□ -0.42
USP6NL-202ENST00000379237 WHAMMP3Q1A5X7 153 aa12.41□□□□□ -0.42
USP6NL-202ENST00000379237 CCDC40Q4G0X9 1142 aa12.41□□□□□ -0.42
USP6NL-202ENST00000379237 PNMA8AQ86V59 439 aaPredicted RBP12.41□□□□□ -0.42
USP6NL-202ENST00000379237 SPDL1Q96EA4 605 aa12.41□□□□□ -0.42
USP6NL-202ENST00000379237 ZNHIT6Q9NWK9 470 aaKnown RBP12.41□□□□□ -0.42
USP6NL-202ENST00000379237 KDM5AP29375 1690 aaKnown RBP12.41□□□□□ -0.42
USP6NL-202ENST00000379237 PPP1R12BO60237 982 aaPredicted RBP12.41□□□□□ -0.42
USP6NL-202ENST00000379237 HPDP32754 393 aaPredicted RBP12.41□□□□□ -0.42
USP6NL-202ENST00000379237 KCTD16Q68DU8 428 aa12.41□□□□□ -0.42
USP6NL-202ENST00000379237 TTC21AQ8NDW8 1320 aa12.41□□□□□ -0.42
USP6NL-202ENST00000379237 HDGFL1Q5TGJ6 251 aa12.41□□□□□ -0.42
USP6NL-202ENST00000379237 FAM227BQ96M60 508 aa12.41□□□□□ -0.42
USP6NL-202ENST00000379237 KAT14Q9H8E8 782 aa12.41□□□□□ -0.42
USP6NL-202ENST00000379237 VWA3AA6NCI4 1184 aa12.41□□□□□ -0.42
USP6NL-202ENST00000379237 E7EVH7 732 aa12.41□□□□□ -0.42
USP6NL-202ENST00000379237 GGCXP38435 758 aa12.41□□□□□ -0.42
USP6NL-202ENST00000379237 DNA2P51530 1060 aa12.41□□□□□ -0.42
USP6NL-202ENST00000379237 RAB11FIP4Q86YS3 637 aa12.41□□□□□ -0.42
USP6NL-202ENST00000379237 NUCKS1Q9H1E3 243 aaKnown RBP12.41□□□□□ -0.42
USP6NL-202ENST00000379237 IL25Q9H293 177 aa12.41□□□□□ -0.42
USP6NL-202ENST00000379237 GOLPH3LQ9H4A5 285 aa12.41□□□□□ -0.42
USP6NL-202ENST00000379237 KLC4Q9NSK0 619 aa12.41□□□□□ -0.42
USP6NL-202ENST00000379237 PCDHA7Q9UN72 937 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms