RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 PPP1R12BO60237 982 aaPredicted RBP22.69■■□□□ 1.22
PDLIM4-202ENST00000379018 ALDH1A1P00352 501 aa22.69■■□□□ 1.22
PDLIM4-202ENST00000379018 RBM5P52756 815 aaKnown RBP eCLIP22.69■■□□□ 1.22
PDLIM4-202ENST00000379018 CASP7P55210 303 aa22.69■■□□□ 1.22
PDLIM4-202ENST00000379018 CFAP100Q494V2 611 aa22.69■■□□□ 1.22
PDLIM4-202ENST00000379018 DNAAF4Q8WXU2 420 aa22.69■■□□□ 1.22
PDLIM4-202ENST00000379018 ECM29Q5VYK3 1845 aa22.68■■□□□ 1.22
PDLIM4-202ENST00000379018 MYO1BO43795 1136 aa22.68■■□□□ 1.22
PDLIM4-202ENST00000379018 PLIN1O60240 522 aa22.68■■□□□ 1.22
PDLIM4-202ENST00000379018 AOX1Q06278 1338 aa22.67■■□□□ 1.22
PDLIM4-202ENST00000379018 IGF2BP3O00425 579 aaKnown RBP eCLIP22.67■■□□□ 1.22
PDLIM4-202ENST00000379018 CSF1RP07333 972 aa22.67■■□□□ 1.22
PDLIM4-202ENST00000379018 ZNF804AQ7Z570 1209 aa22.67■■□□□ 1.22
PDLIM4-202ENST00000379018 CFHR5Q9BXR6 569 aa22.67■■□□□ 1.22
PDLIM4-202ENST00000379018 A0A1B0GUL6 1792 aa22.67■■□□□ 1.22
PDLIM4-202ENST00000379018 IFIT5Q13325 482 aaKnown RBP22.66■■□□□ 1.22
PDLIM4-202ENST00000379018 OTOP1Q7RTM1 612 aa22.66■■□□□ 1.22
PDLIM4-202ENST00000379018 WWC1Q8IX03 1113 aa22.66■■□□□ 1.22
PDLIM4-202ENST00000379018 LINS1Q8NG48 757 aa22.66■■□□□ 1.22
PDLIM4-202ENST00000379018 NBPF12Q5TAG4 269 aaPredicted RBP22.65■■□□□ 1.22
PDLIM4-202ENST00000379018 PRMT6Q96LA8 375 aaPredicted RBP22.65■■□□□ 1.22
PDLIM4-202ENST00000379018 PPP2R3BQ9Y5P8 575 aa22.65■■□□□ 1.22
PDLIM4-202ENST00000379018 SPDYE2BA6NHP3 402 aa22.64■■□□□ 1.21
PDLIM4-202ENST00000379018 SPDYE6P0CI01 402 aa22.64■■□□□ 1.21
PDLIM4-202ENST00000379018 ZBTB48P10074 688 aaPredicted RBP22.64■■□□□ 1.21
PDLIM4-202ENST00000379018 IREB2P48200 963 aaKnown RBP22.64■■□□□ 1.21
PDLIM4-202ENST00000379018 MAP3K11Q16584 847 aa22.64■■□□□ 1.21
PDLIM4-202ENST00000379018 SUPT20HL1Q3ZLR7 823 aa22.64■■□□□ 1.21
PDLIM4-202ENST00000379018 CCDC184Q52MB2 194 aa22.64■■□□□ 1.21
PDLIM4-202ENST00000379018 TAF7LQ5H9L4 462 aa22.64■■□□□ 1.21
PDLIM4-202ENST00000379018 CD99L2Q8TCZ2 262 aa22.64■■□□□ 1.21
PDLIM4-202ENST00000379018 ZNF594Q96JF6 807 aaPredicted RBP22.64■■□□□ 1.21
PDLIM4-202ENST00000379018 SALL2Q9Y467 1007 aaPredicted RBP22.64■■□□□ 1.21
PDLIM4-202ENST00000379018 IRS2Q9Y4H2 1338 aa22.63■■□□□ 1.21
PDLIM4-202ENST00000379018 POTEFA5A3E0 1075 aa22.63■■□□□ 1.21
PDLIM4-202ENST00000379018 F6X3S4 739 aa22.63■■□□□ 1.21
PDLIM4-202ENST00000379018 INHBEP58166 350 aa22.63■■□□□ 1.21
PDLIM4-202ENST00000379018 MTMR14Q8NCE2 650 aa22.63■■□□□ 1.21
PDLIM4-202ENST00000379018 GJA5P36382 358 aa22.62■■□□□ 1.21
PDLIM4-202ENST00000379018 CRHR2Q13324 411 aa22.62■■□□□ 1.21
PDLIM4-202ENST00000379018 FANCIQ9NVI1 1328 aa22.61■■□□□ 1.21
PDLIM4-202ENST00000379018 IL1R1P14778 569 aa22.61■■□□□ 1.21
PDLIM4-202ENST00000379018 FOXO4P98177 505 aa22.61■■□□□ 1.21
PDLIM4-202ENST00000379018 RASA3Q14644 834 aa22.61■■□□□ 1.21
PDLIM4-202ENST00000379018 LMBR1LQ6UX01 489 aa22.61■■□□□ 1.21
PDLIM4-202ENST00000379018 ERO1AQ96HE7 468 aa22.61■■□□□ 1.21
PDLIM4-202ENST00000379018 ELP3Q9H9T3 547 aa22.61■■□□□ 1.21
PDLIM4-202ENST00000379018 CNNM1Q9NRU3 951 aa22.61■■□□□ 1.21
PDLIM4-202ENST00000379018 OTOFQ9HC10 1997 aa22.6■■□□□ 1.21
PDLIM4-202ENST00000379018 KIAA0100Q14667 2235 aaKnown RBP22.6■■□□□ 1.21
PDLIM4-202ENST00000379018 OTUD7BQ6GQQ9 843 aa22.6■■□□□ 1.21
PDLIM4-202ENST00000379018 C15orf52Q6ZUT6 534 aaKnown RBP22.6■■□□□ 1.21
PDLIM4-202ENST00000379018 HTTP42858 3142 aa22.6■■□□□ 1.21
PDLIM4-202ENST00000379018 USP2O75604 605 aaPredicted RBP22.59■■□□□ 1.21
PDLIM4-202ENST00000379018 CCDC27Q2M243 656 aa22.59■■□□□ 1.21
PDLIM4-202ENST00000379018 CCDC57Q2TAC2 916 aa22.59■■□□□ 1.21
PDLIM4-202ENST00000379018 EPHA10Q5JZY3 1008 aa22.59■■□□□ 1.21
PDLIM4-202ENST00000379018 LDHAL6AQ6ZMR3 332 aa22.59■■□□□ 1.21
PDLIM4-202ENST00000379018 ANKRD13AQ8IZ07 590 aa22.59■■□□□ 1.21
PDLIM4-202ENST00000379018 CACNA1FO60840 1977 aa22.59■■□□□ 1.21
PDLIM4-202ENST00000379018 MFSD14BQ5SR56 506 aa22.58■■□□□ 1.21
PDLIM4-202ENST00000379018 EFCC1Q9HA90 598 aa22.58■■□□□ 1.21
PDLIM4-202ENST00000379018 PTPN22Q9Y2R2 807 aa22.58■■□□□ 1.21
PDLIM4-202ENST00000379018 FKBP1AP62942 108 aaKnown RBP22.57■■□□□ 1.2
PDLIM4-202ENST00000379018 INTS3Q68E01 1043 aaKnown RBP22.57■■□□□ 1.2
PDLIM4-202ENST00000379018 CDAN1Q8IWY9 1227 aa22.57■■□□□ 1.2
PDLIM4-202ENST00000379018 GCC1Q96CN9 775 aa22.57■■□□□ 1.2
PDLIM4-202ENST00000379018 OPTNQ96CV9 577 aa22.57■■□□□ 1.2
PDLIM4-202ENST00000379018 PTPN18Q99952 460 aa22.57■■□□□ 1.2
PDLIM4-202ENST00000379018 TDRD3Q9H7E2 651 aaKnown RBP22.57■■□□□ 1.2
PDLIM4-202ENST00000379018 ZNF70Q9UC06 446 aaPredicted RBP22.57■■□□□ 1.2
PDLIM4-202ENST00000379018 TTF2Q9UNY4 1162 aaKnown RBP22.57■■□□□ 1.2
PDLIM4-202ENST00000379018 IL16Q14005 1332 aa22.57■■□□□ 1.2
PDLIM4-202ENST00000379018 LAMB1P07942 1786 aa22.56■■□□□ 1.2
PDLIM4-202ENST00000379018 TCP10L2B9ZVM9 353 aa22.56■■□□□ 1.2
PDLIM4-202ENST00000379018 GYG1P46976 350 aa22.56■■□□□ 1.2
PDLIM4-202ENST00000379018 SP3Q02447 781 aa22.56■■□□□ 1.2
PDLIM4-202ENST00000379018 EXOSC9Q06265 439 aaKnown RBP22.56■■□□□ 1.2
PDLIM4-202ENST00000379018 BEND3Q5T5X7 828 aa22.56■■□□□ 1.2
PDLIM4-202ENST00000379018 CNKSR2Q8WXI2 1034 aa22.56■■□□□ 1.2
PDLIM4-202ENST00000379018 MKI67P46013 3256 aaKnown RBP22.55■■□□□ 1.2
PDLIM4-202ENST00000379018 VAMP4O75379 141 aa22.55■■□□□ 1.2
PDLIM4-202ENST00000379018 TNFAIP1Q13829 316 aa22.55■■□□□ 1.2
PDLIM4-202ENST00000379018 CENPFP49454 3210 aa22.55■■□□□ 1.2
PDLIM4-202ENST00000379018 EN2P19622 333 aaPredicted RBP22.54■■□□□ 1.2
PDLIM4-202ENST00000379018 CAP1Q01518 475 aa22.54■■□□□ 1.2
PDLIM4-202ENST00000379018 SPDYE2Q495Y8 402 aa22.54■■□□□ 1.2
PDLIM4-202ENST00000379018 C9orf78Q9NZ63 289 aaPredicted RBP22.54■■□□□ 1.2
PDLIM4-202ENST00000379018 UNCXA6NJT0 531 aa22.53■■□□□ 1.2
PDLIM4-202ENST00000379018 GRM8O00222 908 aa22.53■■□□□ 1.2
PDLIM4-202ENST00000379018 MYCP01106 439 aaPredicted RBP22.53■■□□□ 1.2
PDLIM4-202ENST00000379018 TAF1CQ15572 869 aaPredicted RBP22.53■■□□□ 1.2
PDLIM4-202ENST00000379018 SLC4A10Q6U841 1118 aa22.53■■□□□ 1.2
PDLIM4-202ENST00000379018 TMEM39BQ9GZU3 492 aa22.53■■□□□ 1.2
PDLIM4-202ENST00000379018 IQSEC3Q9UPP2 1182 aaPredicted RBP22.53■■□□□ 1.2
PDLIM4-202ENST00000379018 HIBADHP31937 336 aaKnown RBP22.52■■□□□ 1.2
PDLIM4-202ENST00000379018 CHAF1AQ13111 956 aaPredicted RBP22.52■■□□□ 1.2
PDLIM4-202ENST00000379018 HABP4Q5JVS0 413 aaKnown RBP22.52■■□□□ 1.2
PDLIM4-202ENST00000379018 RBBP6Q7Z6E9 1792 aaKnown RBP22.51■■□□□ 1.19
PDLIM4-202ENST00000379018 CCL15-CCL14A0A0B4J2E2 113 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms