RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 REXO1L1PQ8IX06 675 aa7.81□□□□□ -1.16
CDKAL1-202ENST00000378610 CCAR2Q8N163 923 aaKnown RBP7.81□□□□□ -1.16
CDKAL1-202ENST00000378610 SPC24Q8NBT2 197 aa7.81□□□□□ -1.16
CDKAL1-202ENST00000378610 RASSF4Q9H2L5 321 aa7.81□□□□□ -1.16
CDKAL1-202ENST00000378610 SPC25Q9HBM1 224 aa7.81□□□□□ -1.16
CDKAL1-202ENST00000378610 V9GYY5 206 aaPredicted RBP7.81□□□□□ -1.16
CDKAL1-202ENST00000378610 RICTORQ6R327 1708 aa7.8□□□□□ -1.16
CDKAL1-202ENST00000378610 TMEM131LA2VDJ0 1609 aa7.8□□□□□ -1.16
CDKAL1-202ENST00000378610 USP17L15C9J2P7 530 aa7.8□□□□□ -1.16
CDKAL1-202ENST00000378610 USP17L10C9JJH3 530 aa7.8□□□□□ -1.16
CDKAL1-202ENST00000378610 USP17L13C9JLJ4 530 aa7.8□□□□□ -1.16
CDKAL1-202ENST00000378610 USP17L12C9JPN9 530 aa7.8□□□□□ -1.16
CDKAL1-202ENST00000378610 USP17L11C9JVI0 530 aa7.8□□□□□ -1.16
CDKAL1-202ENST00000378610 USP17L21D6R901 530 aa7.8□□□□□ -1.16
CDKAL1-202ENST00000378610 USP17L18D6R9N7 530 aa7.8□□□□□ -1.16
CDKAL1-202ENST00000378610 USP17L22D6RA61 530 aa7.8□□□□□ -1.16
CDKAL1-202ENST00000378610 USP17L17D6RBQ6 530 aa7.8□□□□□ -1.16
CDKAL1-202ENST00000378610 USP17L19D6RCP7 530 aa7.8□□□□□ -1.16
CDKAL1-202ENST00000378610 USP17L20D6RJB6 530 aa7.8□□□□□ -1.16
CDKAL1-202ENST00000378610 FYB1O15117 783 aa7.8□□□□□ -1.16
CDKAL1-202ENST00000378610 P4HBP07237 508 aaKnown RBP7.8□□□□□ -1.16
CDKAL1-202ENST00000378610 USP17L24Q0WX57 530 aa7.8□□□□□ -1.16
CDKAL1-202ENST00000378610 ST3GAL1Q11201 340 aa7.8□□□□□ -1.16
CDKAL1-202ENST00000378610 SECISBP2LQ93073 1101 aaKnown RBP7.8□□□□□ -1.16
CDKAL1-202ENST00000378610 NPATQ14207 1427 aa7.8□□□□□ -1.16
CDKAL1-202ENST00000378610 DIAPH1O60610 1272 aaKnown RBP7.8□□□□□ -1.16
CDKAL1-202ENST00000378610 GIGYF1O75420 1035 aaPredicted RBP7.8□□□□□ -1.16
CDKAL1-202ENST00000378610 NDUFV2P19404 249 aa7.8□□□□□ -1.16
CDKAL1-202ENST00000378610 ECM1Q16610 540 aa7.8□□□□□ -1.16
CDKAL1-202ENST00000378610 RUFY3Q7L099 469 aa7.8□□□□□ -1.16
CDKAL1-202ENST00000378610 RNF19AQ9NV58 838 aa7.8□□□□□ -1.16
CDKAL1-202ENST00000378610 DCTN4Q9UJW0 460 aa7.8□□□□□ -1.16
CDKAL1-202ENST00000378610 COMMD10Q9Y6G5 202 aa7.8□□□□□ -1.16
CDKAL1-202ENST00000378610 SPATA31D1Q6ZQQ2 1576 aa7.79□□□□□ -1.16
CDKAL1-202ENST00000378610 PRC1O43663 620 aa7.79□□□□□ -1.16
CDKAL1-202ENST00000378610 CASQ1P31415 396 aa7.79□□□□□ -1.16
CDKAL1-202ENST00000378610 PDE6BP35913 854 aa7.79□□□□□ -1.16
CDKAL1-202ENST00000378610 AMPD3Q01432 767 aa7.79□□□□□ -1.16
CDKAL1-202ENST00000378610 MAP3K11Q16584 847 aa7.79□□□□□ -1.16
CDKAL1-202ENST00000378610 TWISTNBQ3B726 338 aaPredicted RBP7.79□□□□□ -1.16
CDKAL1-202ENST00000378610 LUZP1Q86V48 1076 aa7.79□□□□□ -1.16
CDKAL1-202ENST00000378610 C8orf58Q8NAV2 365 aa7.79□□□□□ -1.16
CDKAL1-202ENST00000378610 OSBPL5Q9H0X9 879 aaPredicted RBP7.79□□□□□ -1.16
CDKAL1-202ENST00000378610 IL25Q9H293 177 aa7.79□□□□□ -1.16
CDKAL1-202ENST00000378610 DDX60Q8IY21 1712 aaKnown RBP7.79□□□□□ -1.16
CDKAL1-202ENST00000378610 USP17L3A6NCW0 530 aa7.79□□□□□ -1.16
CDKAL1-202ENST00000378610 USP17L4A6NCW7 530 aa7.79□□□□□ -1.16
CDKAL1-202ENST00000378610 NUTM2BA6NNL0 878 aaPredicted RBP7.79□□□□□ -1.16
CDKAL1-202ENST00000378610 NUTM2EB1AL46 878 aaPredicted RBP7.79□□□□□ -1.16
CDKAL1-202ENST00000378610 GUCY2CP25092 1073 aa7.79□□□□□ -1.16
CDKAL1-202ENST00000378610 SOX11P35716 441 aa7.79□□□□□ -1.16
CDKAL1-202ENST00000378610 PPP4CP60510 307 aa7.79□□□□□ -1.16
CDKAL1-202ENST00000378610 NUTM2DQ5VT03 806 aaPredicted RBP7.79□□□□□ -1.16
CDKAL1-202ENST00000378610 ICE2Q659A1 982 aa7.79□□□□□ -1.16
CDKAL1-202ENST00000378610 USP17L2Q6R6M4 530 aa7.79□□□□□ -1.16
CDKAL1-202ENST00000378610 USP17L1Q7RTZ2 530 aa7.79□□□□□ -1.16
CDKAL1-202ENST00000378610 SRLQ86TD4 932 aa7.79□□□□□ -1.16
CDKAL1-202ENST00000378610 NUTM2AQ8IVF1 878 aaPredicted RBP7.79□□□□□ -1.16
CDKAL1-202ENST00000378610 CLSTN2Q9H4D0 955 aa7.79□□□□□ -1.16
CDKAL1-202ENST00000378610 TTF2Q9UNY4 1162 aaKnown RBP7.79□□□□□ -1.16
CDKAL1-202ENST00000378610 FMN2Q9NZ56 1722 aa7.79□□□□□ -1.16
CDKAL1-202ENST00000378610 DIP2CQ9Y2E4 1556 aa7.78□□□□□ -1.16
CDKAL1-202ENST00000378610 ERICH4A6NGS2 130 aa7.78□□□□□ -1.16
CDKAL1-202ENST00000378610 MYO1CO00159 1063 aa7.78□□□□□ -1.16
CDKAL1-202ENST00000378610 CPP00450 1065 aa7.78□□□□□ -1.16
CDKAL1-202ENST00000378610 CTDSPL2Q05D32 466 aa7.78□□□□□ -1.16
CDKAL1-202ENST00000378610 TPD52L1Q16890 204 aaPredicted RBP7.78□□□□□ -1.16
CDKAL1-202ENST00000378610 SYT10Q6XYQ8 523 aa7.78□□□□□ -1.16
CDKAL1-202ENST00000378610 GLYCTKQ8IVS8 523 aa7.78□□□□□ -1.16
CDKAL1-202ENST00000378610 DEPDC4Q8N2C3 294 aa7.78□□□□□ -1.16
CDKAL1-202ENST00000378610 FBXO18Q8NFZ0 1043 aa7.78□□□□□ -1.16
CDKAL1-202ENST00000378610 FBXO41Q8TF61 875 aa7.78□□□□□ -1.16
CDKAL1-202ENST00000378610 PSDA5PKW4 1024 aaPredicted RBP7.78□□□□□ -1.16
CDKAL1-202ENST00000378610 FAM196BA6NMK8 535 aa7.78□□□□□ -1.16
CDKAL1-202ENST00000378610 DNAJC6O75061 913 aa7.78□□□□□ -1.16
CDKAL1-202ENST00000378610 PTPN14Q15678 1187 aa7.78□□□□□ -1.16
CDKAL1-202ENST00000378610 MAP9Q49MG5 647 aa7.78□□□□□ -1.16
CDKAL1-202ENST00000378610 TTC6Q86TZ1 520 aa7.78□□□□□ -1.16
CDKAL1-202ENST00000378610 GOLGA5Q8TBA6 731 aa7.78□□□□□ -1.16
CDKAL1-202ENST00000378610 HYPKQ9NX55 129 aa7.78□□□□□ -1.16
CDKAL1-202ENST00000378610 PHLPP2Q6ZVD8 1323 aa7.78□□□□□ -1.16
CDKAL1-202ENST00000378610 GSCP56915 257 aaPredicted RBP7.78□□□□□ -1.16
CDKAL1-202ENST00000378610 DNM1Q05193 864 aaKnown RBP7.78□□□□□ -1.16
CDKAL1-202ENST00000378610 PLPP6Q8IY26 295 aa7.78□□□□□ -1.16
CDKAL1-202ENST00000378610 RNF34Q969K3 372 aa7.78□□□□□ -1.16
CDKAL1-202ENST00000378610 PRAM1Q96QH2 718 aa7.78□□□□□ -1.16
CDKAL1-202ENST00000378610 LSG1Q9H089 658 aaKnown RBP7.78□□□□□ -1.16
CDKAL1-202ENST00000378610 TMX4Q9H1E5 349 aaPredicted RBP7.78□□□□□ -1.16
CDKAL1-202ENST00000378610 DDX19AQ9NUU7 478 aaKnown RBP7.78□□□□□ -1.16
CDKAL1-202ENST00000378610 ORC3Q9UBD5 711 aaPredicted RBP7.78□□□□□ -1.16
CDKAL1-202ENST00000378610 RSPH14Q9UHP6 348 aa7.78□□□□□ -1.16
CDKAL1-202ENST00000378610 LCMT1Q9UIC8 334 aa7.78□□□□□ -1.16
CDKAL1-202ENST00000378610 LIMCH1Q9UPQ0 1083 aa7.78□□□□□ -1.16
CDKAL1-202ENST00000378610 SNX14Q9Y5W7 946 aa7.78□□□□□ -1.16
CDKAL1-202ENST00000378610 ANO6Q4KMQ2 910 aa7.77□□□□□ -1.17
CDKAL1-202ENST00000378610 SWT1Q5T5J6 900 aaKnown RBP7.77□□□□□ -1.17
CDKAL1-202ENST00000378610 SUGP1Q8IWZ8 645 aaKnown RBP7.77□□□□□ -1.17
CDKAL1-202ENST00000378610 SMARCE1Q969G3 411 aa7.77□□□□□ -1.17
CDKAL1-202ENST00000378610 EXOC4Q96A65 974 aa7.77□□□□□ -1.17
CDKAL1-202ENST00000378610 PHACTR3Q96KR7 559 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms