RNA–Protein interactions for RNA: ENST00000378549.5

ITM2B-201, Transcript of integral membrane protein 2B, humanhuman

TSL 5 BASIC

Gene ITM2B, Length 805 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-201ENST00000378549 LRRCC1Q9C099 1032 aa21.2■□□□□ 0.98
ITM2B-201ENST00000378549 GPRC5DQ9NZD1 345 aa21.2■□□□□ 0.98
ITM2B-201ENST00000378549 FAM205AQ6ZU69 1335 aa21.2■□□□□ 0.98
ITM2B-201ENST00000378549 SEMA3EO15041 775 aa21.19■□□□□ 0.98
ITM2B-201ENST00000378549 NEFLP07196 543 aa21.19■□□□□ 0.98
ITM2B-201ENST00000378549 CHAF1AQ13111 956 aaPredicted RBP21.19■□□□□ 0.98
ITM2B-201ENST00000378549 BCL11AQ9H165 835 aa21.19■□□□□ 0.98
ITM2B-201ENST00000378549 RWDD1Q9H446 243 aaPredicted RBP21.19■□□□□ 0.98
ITM2B-201ENST00000378549 JAG2Q9Y219 1238 aa21.19■□□□□ 0.98
ITM2B-201ENST00000378549 POTECB2RU33 542 aa21.18■□□□□ 0.98
ITM2B-201ENST00000378549 EPHX2P34913 555 aa21.18■□□□□ 0.98
ITM2B-201ENST00000378549 CCDC158Q5M9N0 1113 aa21.18■□□□□ 0.98
ITM2B-201ENST00000378549 C16orf71Q8IYS4 520 aaPredicted RBP21.18■□□□□ 0.98
ITM2B-201ENST00000378549 EAF2Q96CJ1 260 aaPredicted RBP21.18■□□□□ 0.98
ITM2B-201ENST00000378549 DBNDD2Q9BQY9 259 aa21.18■□□□□ 0.98
ITM2B-201ENST00000378549 ECM29Q5VYK3 1845 aa21.18■□□□□ 0.98
ITM2B-201ENST00000378549 H7C1D1 291 aa21.17■□□□□ 0.98
ITM2B-201ENST00000378549 FKBP1AP62942 108 aaKnown RBP21.17■□□□□ 0.98
ITM2B-201ENST00000378549 MFSD14BQ5SR56 506 aa21.17■□□□□ 0.98
ITM2B-201ENST00000378549 MICALL2Q8IY33 904 aa21.17■□□□□ 0.98
ITM2B-201ENST00000378549 TBC1D22AQ8WUA7 517 aa21.17■□□□□ 0.98
ITM2B-201ENST00000378549 MXD3Q9BW11 206 aa21.17■□□□□ 0.98
ITM2B-201ENST00000378549 CCDC8Q9H0W5 538 aaPredicted RBP21.17■□□□□ 0.98
ITM2B-201ENST00000378549 CNOT7Q9UIV1 285 aaKnown RBP21.17■□□□□ 0.98
ITM2B-201ENST00000378549 DBNLQ9UJU6 430 aaKnown RBP21.17■□□□□ 0.98
ITM2B-201ENST00000378549 DENND2AQ9ULE3 1009 aa21.17■□□□□ 0.98
ITM2B-201ENST00000378549 COL1A1P02452 1464 aaPredicted RBP21.17■□□□□ 0.98
ITM2B-201ENST00000378549 IFIT2P09913 472 aaKnown RBP21.16■□□□□ 0.98
ITM2B-201ENST00000378549 UQCRFS1P1P0C7P4 283 aa21.16■□□□□ 0.98
ITM2B-201ENST00000378549 EPS15P42566 896 aa21.16■□□□□ 0.98
ITM2B-201ENST00000378549 TTC39AQ5SRH9 613 aa21.16■□□□□ 0.98
ITM2B-201ENST00000378549 GCC1Q96CN9 775 aa21.16■□□□□ 0.98
ITM2B-201ENST00000378549 TAF1DQ9H5J8 278 aaPredicted RBP21.16■□□□□ 0.98
ITM2B-201ENST00000378549 ADARB2Q9NS39 739 aaKnown RBP21.16■□□□□ 0.98
ITM2B-201ENST00000378549 ZBTB47Q9UFB7 747 aaPredicted RBP21.16■□□□□ 0.98
ITM2B-201ENST00000378549 KIF3CO14782 793 aa21.15■□□□□ 0.98
ITM2B-201ENST00000378549 USP17L8P0C7I0 530 aa21.15■□□□□ 0.98
ITM2B-201ENST00000378549 PNMA8AQ86V59 439 aaPredicted RBP21.15■□□□□ 0.98
ITM2B-201ENST00000378549 OGFOD1Q8N543 542 aa21.15■□□□□ 0.98
ITM2B-201ENST00000378549 WDR66Q8TBY9 1149 aa21.15■□□□□ 0.98
ITM2B-201ENST00000378549 GMLQ99445 158 aa21.15■□□□□ 0.98
ITM2B-201ENST00000378549 TLR7Q9NYK1 1049 aaKnown RBP21.15■□□□□ 0.98
ITM2B-201ENST00000378549 POLR2AP24928 1970 aaKnown RBP21.15■□□□□ 0.98
ITM2B-201ENST00000378549 MYO5AQ9Y4I1 1855 aaKnown RBP21.15■□□□□ 0.98
ITM2B-201ENST00000378549 ADAMTSL1Q8N6G6 1762 aa21.15■□□□□ 0.98
ITM2B-201ENST00000378549 ZBTB22O15209 634 aa21.14■□□□□ 0.97
ITM2B-201ENST00000378549 SMARCA5O60264 1052 aaPredicted RBP21.14■□□□□ 0.97
ITM2B-201ENST00000378549 ARID4AP29374 1257 aaPredicted RBP21.14■□□□□ 0.97
ITM2B-201ENST00000378549 RASGRF1Q13972 1273 aa21.14■□□□□ 0.97
ITM2B-201ENST00000378549 EAPPQ56P03 285 aaPredicted RBP21.14■□□□□ 0.97
ITM2B-201ENST00000378549 KIAA0825Q8IV33 1275 aa21.14■□□□□ 0.97
ITM2B-201ENST00000378549 CERS5Q8N5B7 392 aa21.14■□□□□ 0.97
ITM2B-201ENST00000378549 HDAC9Q9UKV0 1011 aa21.14■□□□□ 0.97
ITM2B-201ENST00000378549 MYH2Q9UKX2 1941 aa21.14■□□□□ 0.97
ITM2B-201ENST00000378549 PDS5AQ29RF7 1337 aaKnown RBP21.13■□□□□ 0.97
ITM2B-201ENST00000378549 SHTN1A0MZ66 631 aa21.12■□□□□ 0.97
ITM2B-201ENST00000378549 MMP14P50281 582 aa21.12■□□□□ 0.97
ITM2B-201ENST00000378549 USP50Q70EL3 339 aaPredicted RBP21.12■□□□□ 0.97
ITM2B-201ENST00000378549 MAST2Q6P0Q8 1798 aa21.12■□□□□ 0.97
ITM2B-201ENST00000378549 F8W031 263 aaPredicted RBP21.11■□□□□ 0.97
ITM2B-201ENST00000378549 ZNF280AP59817 542 aaPredicted RBP21.11■□□□□ 0.97
ITM2B-201ENST00000378549 ZGPATQ8N5A5 531 aaKnown RBP21.11■□□□□ 0.97
ITM2B-201ENST00000378549 SPATA5Q8NB90 893 aa21.11■□□□□ 0.97
ITM2B-201ENST00000378549 ZNF512BQ96KM6 892 aaPredicted RBP21.11■□□□□ 0.97
ITM2B-201ENST00000378549 DOCK2Q92608 1830 aa21.11■□□□□ 0.97
ITM2B-201ENST00000378549 SALL1Q9NSC2 1324 aa21.1■□□□□ 0.97
ITM2B-201ENST00000378549 IGHDP01880 384 aa21.1■□□□□ 0.97
ITM2B-201ENST00000378549 MCAMP43121 646 aa21.1■□□□□ 0.97
ITM2B-201ENST00000378549 KIF4BQ2VIQ3 1234 aa21.1■□□□□ 0.97
ITM2B-201ENST00000378549 TBC1D10BQ4KMP7 808 aaPredicted RBP21.1■□□□□ 0.97
ITM2B-201ENST00000378549 SAMD7Q7Z3H4 446 aa21.1■□□□□ 0.97
ITM2B-201ENST00000378549 MYOZ2Q9NPC6 264 aa21.1■□□□□ 0.97
ITM2B-201ENST00000378549 HMG20BQ9P0W2 317 aa21.1■□□□□ 0.97
ITM2B-201ENST00000378549 TTF2Q9UNY4 1162 aaKnown RBP21.1■□□□□ 0.97
ITM2B-201ENST00000378549 SUGT1Q9Y2Z0 365 aa21.1■□□□□ 0.97
ITM2B-201ENST00000378549 MYH7P12883 1935 aa21.1■□□□□ 0.97
ITM2B-201ENST00000378549 MAST3O60307 1309 aa21.09■□□□□ 0.97
ITM2B-201ENST00000378549 TOMM70O94826 608 aa21.09■□□□□ 0.97
ITM2B-201ENST00000378549 RBM26Q5T8P6 1007 aaKnown RBP21.09■□□□□ 0.97
ITM2B-201ENST00000378549 ANKRD45Q5TZF3 282 aa21.09■□□□□ 0.97
ITM2B-201ENST00000378549 LDHDQ86WU2 507 aa21.09■□□□□ 0.97
ITM2B-201ENST00000378549 SMC5Q8IY18 1101 aa21.09■□□□□ 0.97
ITM2B-201ENST00000378549 TRPM4Q8TD43 1214 aa21.09■□□□□ 0.97
ITM2B-201ENST00000378549 GPATCH3Q96I76 525 aa21.09■□□□□ 0.97
ITM2B-201ENST00000378549 CLEC11AQ9Y240 323 aa21.09■□□□□ 0.97
ITM2B-201ENST00000378549 SCARF1Q14162 830 aa21.08■□□□□ 0.97
ITM2B-201ENST00000378549 PI16Q6UXB8 463 aa21.08■□□□□ 0.97
ITM2B-201ENST00000378549 LDHBP07195 334 aaKnown RBP21.07■□□□□ 0.96
ITM2B-201ENST00000378549 RBM46Q8TBY0 533 aaKnown RBP21.07■□□□□ 0.96
ITM2B-201ENST00000378549 SNRKQ9NRH2 765 aa21.07■□□□□ 0.96
ITM2B-201ENST00000378549 ABCF2Q9UG63 623 aa21.07■□□□□ 0.96
ITM2B-201ENST00000378549 EGFRP00533 1210 aa21.06■□□□□ 0.96
ITM2B-201ENST00000378549 POTEIP0CG38 1075 aa21.06■□□□□ 0.96
ITM2B-201ENST00000378549 POTEJP0CG39 1038 aa21.06■□□□□ 0.96
ITM2B-201ENST00000378549 SPTY2D1Q68D10 685 aaPredicted RBP21.06■□□□□ 0.96
ITM2B-201ENST00000378549 PRDX5P30044 214 aa21.05■□□□□ 0.96
ITM2B-201ENST00000378549 RBM5P52756 815 aaKnown RBP eCLIP21.05■□□□□ 0.96
ITM2B-201ENST00000378549 DLGAP5Q15398 846 aa21.05■□□□□ 0.96
ITM2B-201ENST00000378549 GRIK5Q16478 980 aa21.05■□□□□ 0.96
ITM2B-201ENST00000378549 B4GALNT3Q6L9W6 998 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms