RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 H7C1D1 291 aa16.29■□□□□ 0.2
CKAP2-202ENST00000378034 EPHX2P34913 555 aa16.29■□□□□ 0.2
CKAP2-202ENST00000378034 CCDC102BQ68D86 513 aa16.29■□□□□ 0.2
CKAP2-202ENST00000378034 MYH13Q9UKX3 1938 aa16.29■□□□□ 0.2
CKAP2-202ENST00000378034 ADORA1P30542 326 aa16.29■□□□□ 0.2
CKAP2-202ENST00000378034 HDAC1Q13547 482 aaPredicted RBP16.29■□□□□ 0.2
CKAP2-202ENST00000378034 GORABQ5T7V8 394 aa16.29■□□□□ 0.2
CKAP2-202ENST00000378034 TBC1D22AQ8WUA7 517 aa16.29■□□□□ 0.2
CKAP2-202ENST00000378034 ADARB2Q9NS39 739 aaKnown RBP16.29■□□□□ 0.2
CKAP2-202ENST00000378034 EPS15P42566 896 aa16.28■□□□□ 0.2
CKAP2-202ENST00000378034 USP50Q70EL3 339 aaPredicted RBP16.28■□□□□ 0.2
CKAP2-202ENST00000378034 CLASRPQ8N2M8 674 aaKnown RBP16.28■□□□□ 0.2
CKAP2-202ENST00000378034 DENND2AQ9ULE3 1009 aa16.28■□□□□ 0.2
CKAP2-202ENST00000378034 PHKA1P46020 1223 aa16.27■□□□□ 0.2
CKAP2-202ENST00000378034 MICALL2Q8IY33 904 aa16.27■□□□□ 0.2
CKAP2-202ENST00000378034 PDS5AQ29RF7 1337 aaKnown RBP16.27■□□□□ 0.2
CKAP2-202ENST00000378034 TOMM70O94826 608 aa16.27■□□□□ 0.19
CKAP2-202ENST00000378034 USP17L8P0C7I0 530 aa16.27■□□□□ 0.19
CKAP2-202ENST00000378034 UQCRFS1P1P0C7P4 283 aa16.27■□□□□ 0.19
CKAP2-202ENST00000378034 ZNF280AP59817 542 aaPredicted RBP16.27■□□□□ 0.19
CKAP2-202ENST00000378034 WDR66Q8TBY9 1149 aa16.27■□□□□ 0.19
CKAP2-202ENST00000378034 EAF2Q96CJ1 260 aaPredicted RBP16.27■□□□□ 0.19
CKAP2-202ENST00000378034 LRRCC1Q9C099 1032 aa16.27■□□□□ 0.19
CKAP2-202ENST00000378034 IQSEC3Q9UPP2 1182 aaPredicted RBP16.27■□□□□ 0.19
CKAP2-202ENST00000378034 CCDC158Q5M9N0 1113 aa16.26■□□□□ 0.19
CKAP2-202ENST00000378034 OGFOD1Q8N543 542 aa16.26■□□□□ 0.19
CKAP2-202ENST00000378034 RWDD1Q9H446 243 aaPredicted RBP16.26■□□□□ 0.19
CKAP2-202ENST00000378034 ARID4AP29374 1257 aaPredicted RBP16.26■□□□□ 0.19
CKAP2-202ENST00000378034 MFSD14BQ5SR56 506 aa16.26■□□□□ 0.19
CKAP2-202ENST00000378034 AACSQ86V21 672 aa16.26■□□□□ 0.19
CKAP2-202ENST00000378034 RBM46Q8TBY0 533 aaKnown RBP16.26■□□□□ 0.19
CKAP2-202ENST00000378034 GCC1Q96CN9 775 aa16.26■□□□□ 0.19
CKAP2-202ENST00000378034 ZNF512BQ96KM6 892 aaPredicted RBP16.26■□□□□ 0.19
CKAP2-202ENST00000378034 DBNDD2Q9BQY9 259 aa16.26■□□□□ 0.19
CKAP2-202ENST00000378034 MXD3Q9BW11 206 aa16.26■□□□□ 0.19
CKAP2-202ENST00000378034 IL1RAPL2Q9NP60 686 aa16.26■□□□□ 0.19
CKAP2-202ENST00000378034 HDAC9Q9UKV0 1011 aa16.26■□□□□ 0.19
CKAP2-202ENST00000378034 SUGT1Q9Y2Z0 365 aa16.26■□□□□ 0.19
CKAP2-202ENST00000378034 APBB1O00213 710 aa16.25■□□□□ 0.19
CKAP2-202ENST00000378034 IRX6P78412 446 aaPredicted RBP16.25■□□□□ 0.19
CKAP2-202ENST00000378034 CHAF1AQ13111 956 aaPredicted RBP16.25■□□□□ 0.19
CKAP2-202ENST00000378034 LDHDQ86WU2 507 aa16.25■□□□□ 0.19
CKAP2-202ENST00000378034 CERS5Q8N5B7 392 aa16.25■□□□□ 0.19
CKAP2-202ENST00000378034 DBNLQ9UJU6 430 aaKnown RBP16.25■□□□□ 0.19
CKAP2-202ENST00000378034 SALL1Q9NSC2 1324 aa16.24■□□□□ 0.19
CKAP2-202ENST00000378034 ADAMTSL1Q8N6G6 1762 aa16.24■□□□□ 0.19
CKAP2-202ENST00000378034 CCDC8Q9H0W5 538 aaPredicted RBP16.24■□□□□ 0.19
CKAP2-202ENST00000378034 IFIT2P09913 472 aaKnown RBP16.24■□□□□ 0.19
CKAP2-202ENST00000378034 TTC39AQ5SRH9 613 aa16.24■□□□□ 0.19
CKAP2-202ENST00000378034 KIAA0825Q8IV33 1275 aa16.24■□□□□ 0.19
CKAP2-202ENST00000378034 ZGPATQ8N5A5 531 aaKnown RBP16.24■□□□□ 0.19
CKAP2-202ENST00000378034 JAG2Q9Y219 1238 aa16.24■□□□□ 0.19
CKAP2-202ENST00000378034 RASGRF1Q13972 1273 aa16.23■□□□□ 0.19
CKAP2-202ENST00000378034 EAPPQ56P03 285 aaPredicted RBP16.23■□□□□ 0.19
CKAP2-202ENST00000378034 SMC1BQ8NDV3 1235 aa16.23■□□□□ 0.19
CKAP2-202ENST00000378034 ZC3H15Q8WU90 426 aaKnown RBP16.23■□□□□ 0.19
CKAP2-202ENST00000378034 MYOZ2Q9NPC6 264 aa16.23■□□□□ 0.19
CKAP2-202ENST00000378034 COL1A1P02452 1464 aaPredicted RBP16.23■□□□□ 0.19
CKAP2-202ENST00000378034 SHTN1A0MZ66 631 aa16.22■□□□□ 0.19
CKAP2-202ENST00000378034 FSTL1Q12841 308 aa16.22■□□□□ 0.19
CKAP2-202ENST00000378034 KIF4BQ2VIQ3 1234 aa16.22■□□□□ 0.19
CKAP2-202ENST00000378034 CHADLQ6NUI6 762 aa16.22■□□□□ 0.19
CKAP2-202ENST00000378034 SAMD7Q7Z3H4 446 aa16.22■□□□□ 0.19
CKAP2-202ENST00000378034 SPATA5Q8NB90 893 aa16.22■□□□□ 0.19
CKAP2-202ENST00000378034 MRIQ9BWK5 157 aa16.22■□□□□ 0.19
CKAP2-202ENST00000378034 TLR7Q9NYK1 1049 aaKnown RBP16.22■□□□□ 0.19
CKAP2-202ENST00000378034 HMG20BQ9P0W2 317 aa16.22■□□□□ 0.19
CKAP2-202ENST00000378034 PGAP2Q9UHJ9 254 aa16.22■□□□□ 0.19
CKAP2-202ENST00000378034 MAST3O60307 1309 aa16.21■□□□□ 0.19
CKAP2-202ENST00000378034 HDLBPQ00341 1268 aaKnown RBP16.21■□□□□ 0.19
CKAP2-202ENST00000378034 TBC1D10BQ4KMP7 808 aaPredicted RBP16.21■□□□□ 0.19
CKAP2-202ENST00000378034 MTMR14Q8NCE2 650 aa16.21■□□□□ 0.19
CKAP2-202ENST00000378034 TRPM4Q8TD43 1214 aa16.21■□□□□ 0.19
CKAP2-202ENST00000378034 TTF2Q9UNY4 1162 aaKnown RBP16.21■□□□□ 0.19
CKAP2-202ENST00000378034 CLEC11AQ9Y240 323 aa16.21■□□□□ 0.19
CKAP2-202ENST00000378034 MCAMP43121 646 aa16.2■□□□□ 0.18
CKAP2-202ENST00000378034 HIRAP54198 1017 aaPredicted RBP16.2■□□□□ 0.18
CKAP2-202ENST00000378034 SPTY2D1Q68D10 685 aaPredicted RBP16.2■□□□□ 0.18
CKAP2-202ENST00000378034 ZBTB47Q9UFB7 747 aaPredicted RBP16.2■□□□□ 0.18
CKAP2-202ENST00000378034 SERPINA10Q9UK55 444 aa16.2■□□□□ 0.18
CKAP2-202ENST00000378034 IGSF3O75054 1194 aa16.2■□□□□ 0.18
CKAP2-202ENST00000378034 RBM26Q5T8P6 1007 aaKnown RBP16.2■□□□□ 0.18
CKAP2-202ENST00000378034 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.2■□□□□ 0.18
CKAP2-202ENST00000378034 AKAP11Q9UKA4 1901 aa16.19■□□□□ 0.18
CKAP2-202ENST00000378034 F8W031 263 aaPredicted RBP16.19■□□□□ 0.18
CKAP2-202ENST00000378034 SMARCA5O60264 1052 aaPredicted RBP16.19■□□□□ 0.18
CKAP2-202ENST00000378034 POTEIP0CG38 1075 aa16.19■□□□□ 0.18
CKAP2-202ENST00000378034 POTEJP0CG39 1038 aa16.19■□□□□ 0.18
CKAP2-202ENST00000378034 SMC5Q8IY18 1101 aa16.19■□□□□ 0.18
CKAP2-202ENST00000378034 EGFRP00533 1210 aa16.18■□□□□ 0.18
CKAP2-202ENST00000378034 LDHBP07195 334 aaKnown RBP16.18■□□□□ 0.18
CKAP2-202ENST00000378034 SCARF1Q14162 830 aa16.18■□□□□ 0.18
CKAP2-202ENST00000378034 DLGAP5Q15398 846 aa16.18■□□□□ 0.18
CKAP2-202ENST00000378034 ZBED3Q96IU2 234 aaPredicted RBP16.18■□□□□ 0.18
CKAP2-202ENST00000378034 IGHDP01880 384 aa16.18■□□□□ 0.18
CKAP2-202ENST00000378034 NEFLP07196 543 aa16.17■□□□□ 0.18
CKAP2-202ENST00000378034 GRIK5Q16478 980 aa16.17■□□□□ 0.18
CKAP2-202ENST00000378034 CFAP100Q494V2 611 aa16.17■□□□□ 0.18
CKAP2-202ENST00000378034 ANKRD45Q5TZF3 282 aa16.17■□□□□ 0.18
CKAP2-202ENST00000378034 WNT10BO00744 389 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms