RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 ABCC6O95255 1503 aa18.1■□□□□ 0.49
CSNK1A1-202ENST00000377843 CHGBP05060 677 aa18.1■□□□□ 0.49
CSNK1A1-202ENST00000377843 E2F4Q16254 413 aa18.1■□□□□ 0.49
CSNK1A1-202ENST00000377843 HDGFL1Q5TGJ6 251 aa18.1■□□□□ 0.49
CSNK1A1-202ENST00000377843 CCDC8Q9H0W5 538 aaPredicted RBP18.1■□□□□ 0.49
CSNK1A1-202ENST00000377843 BOLA2Q9H3K6 86 aa18.1■□□□□ 0.49
CSNK1A1-202ENST00000377843 ANKZF1Q9H8Y5 726 aa18.1■□□□□ 0.49
CSNK1A1-202ENST00000377843 CEP170BQ9Y4F5 1589 aaPredicted RBP18.1■□□□□ 0.49
CSNK1A1-202ENST00000377843 ITSN1Q15811 1721 aa18.1■□□□□ 0.49
CSNK1A1-202ENST00000377843 SLIT1O75093 1534 aa18.1■□□□□ 0.49
CSNK1A1-202ENST00000377843 TAF5LO75529 589 aa18.1■□□□□ 0.49
CSNK1A1-202ENST00000377843 CORO7P57737 925 aa18.1■□□□□ 0.49
CSNK1A1-202ENST00000377843 NOM1Q5C9Z4 860 aaKnown RBP18.1■□□□□ 0.49
CSNK1A1-202ENST00000377843 LRRC31Q6UY01 552 aa18.1■□□□□ 0.49
CSNK1A1-202ENST00000377843 TOGARAM2Q6ZUX3 1019 aa18.1■□□□□ 0.49
CSNK1A1-202ENST00000377843 ERC1Q8IUD2 1116 aa18.1■□□□□ 0.49
CSNK1A1-202ENST00000377843 GOLGA1Q92805 767 aa18.1■□□□□ 0.49
CSNK1A1-202ENST00000377843 EAF2Q96CJ1 260 aaPredicted RBP18.1■□□□□ 0.49
CSNK1A1-202ENST00000377843 EDC3Q96F86 508 aaKnown RBP18.1■□□□□ 0.49
CSNK1A1-202ENST00000377843 NEK1Q96PY6 1258 aa18.1■□□□□ 0.49
CSNK1A1-202ENST00000377843 JCADQ9P266 1359 aa18.09■□□□□ 0.49
CSNK1A1-202ENST00000377843 PTPDC1A2A3K4 754 aa18.09■□□□□ 0.49
CSNK1A1-202ENST00000377843 NLRP12P59046 1061 aa18.09■□□□□ 0.49
CSNK1A1-202ENST00000377843 GPATCH3Q96I76 525 aa18.09■□□□□ 0.49
CSNK1A1-202ENST00000377843 PNKPQ96T60 521 aa18.09■□□□□ 0.49
CSNK1A1-202ENST00000377843 FSD1Q9BTV5 496 aa18.09■□□□□ 0.49
CSNK1A1-202ENST00000377843 GPATCH11Q8N954 259 aa18.09■□□□□ 0.49
CSNK1A1-202ENST00000377843 MON2Q7Z3U7 1717 aa18.09■□□□□ 0.49
CSNK1A1-202ENST00000377843 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.08■□□□□ 0.49
CSNK1A1-202ENST00000377843 UBASH3AP57075 661 aa18.08■□□□□ 0.49
CSNK1A1-202ENST00000377843 ZNF396Q96N95 335 aaPredicted RBP18.08■□□□□ 0.49
CSNK1A1-202ENST00000377843 IRX2Q9BZI1 471 aaPredicted RBP18.08■□□□□ 0.49
CSNK1A1-202ENST00000377843 HMG20BQ9P0W2 317 aa18.08■□□□□ 0.49
CSNK1A1-202ENST00000377843 TECPR2O15040 1411 aa18.08■□□□□ 0.48
CSNK1A1-202ENST00000377843 PI4KAP2A4QPH2 592 aa18.08■□□□□ 0.48
CSNK1A1-202ENST00000377843 ZSCAN12O43309 604 aa18.08■□□□□ 0.48
CSNK1A1-202ENST00000377843 VSTM4Q8IW00 320 aa18.08■□□□□ 0.48
CSNK1A1-202ENST00000377843 PI4KAP1Q8N8J0 262 aa18.08■□□□□ 0.48
CSNK1A1-202ENST00000377843 INTS13Q9NVM9 706 aa18.08■□□□□ 0.48
CSNK1A1-202ENST00000377843 BRD3Q15059 726 aa18.07■□□□□ 0.48
CSNK1A1-202ENST00000377843 ADALQ6DHV7 355 aa18.07■□□□□ 0.48
CSNK1A1-202ENST00000377843 IL17REQ8NFR9 667 aa18.07■□□□□ 0.48
CSNK1A1-202ENST00000377843 NCOA5Q9HCD5 579 aaKnown RBP18.07■□□□□ 0.48
CSNK1A1-202ENST00000377843 CLIC4Q9Y696 253 aa18.07■□□□□ 0.48
CSNK1A1-202ENST00000377843 HIP1O00291 1037 aa18.07■□□□□ 0.48
CSNK1A1-202ENST00000377843 SASH1O94885 1247 aa18.07■□□□□ 0.48
CSNK1A1-202ENST00000377843 ANXA1P04083 346 aa18.07■□□□□ 0.48
CSNK1A1-202ENST00000377843 SLC3A2P08195 630 aaKnown RBP18.07■□□□□ 0.48
CSNK1A1-202ENST00000377843 DHX8Q14562 1220 aaKnown RBP18.07■□□□□ 0.48
CSNK1A1-202ENST00000377843 ZRSR1Q15695 479 aaKnown RBP18.07■□□□□ 0.48
CSNK1A1-202ENST00000377843 USPL1Q5W0Q7 1092 aa18.07■□□□□ 0.48
CSNK1A1-202ENST00000377843 FCHSD1Q86WN1 690 aa18.07■□□□□ 0.48
CSNK1A1-202ENST00000377843 ACEP12821 1306 aa18.07■□□□□ 0.48
CSNK1A1-202ENST00000377843 PFKFB2O60825 505 aa18.06■□□□□ 0.48
CSNK1A1-202ENST00000377843 EIF2S2P20042 333 aaKnown RBP18.06■□□□□ 0.48
CSNK1A1-202ENST00000377843 CCT2P78371 535 aaKnown RBP18.06■□□□□ 0.48
CSNK1A1-202ENST00000377843 ARHGAP6O43182 974 aa18.06■□□□□ 0.48
CSNK1A1-202ENST00000377843 PHACTR2O75167 634 aa18.06■□□□□ 0.48
CSNK1A1-202ENST00000377843 ALDH1L1O75891 902 aa18.06■□□□□ 0.48
CSNK1A1-202ENST00000377843 HSPA2P54652 639 aa18.06■□□□□ 0.48
CSNK1A1-202ENST00000377843 MTX1Q13505 466 aa18.06■□□□□ 0.48
CSNK1A1-202ENST00000377843 KARSQ15046 597 aaKnown RBP18.06■□□□□ 0.48
CSNK1A1-202ENST00000377843 CFAP100Q494V2 611 aa18.06■□□□□ 0.48
CSNK1A1-202ENST00000377843 STOX1Q6ZVD7 989 aa18.06■□□□□ 0.48
CSNK1A1-202ENST00000377843 DESI2Q9BSY9 194 aa18.06■□□□□ 0.48
CSNK1A1-202ENST00000377843 ABCB6Q9NP58 842 aa18.06■□□□□ 0.48
CSNK1A1-202ENST00000377843 PUF60Q9UHX1 559 aaKnown RBP18.06■□□□□ 0.48
CSNK1A1-202ENST00000377843 L1RE1Q9UN81 338 aa18.06■□□□□ 0.48
CSNK1A1-202ENST00000377843 A0A1W2PQ27 194 aa18.05■□□□□ 0.48
CSNK1A1-202ENST00000377843 A0A1W2PQ64 194 aa18.05■□□□□ 0.48
CSNK1A1-202ENST00000377843 A0A1W2PQD8 194 aa18.05■□□□□ 0.48
CSNK1A1-202ENST00000377843 SERPINC1P01008 464 aa18.05■□□□□ 0.48
CSNK1A1-202ENST00000377843 TFRCP02786 760 aaKnown RBP18.05■□□□□ 0.48
CSNK1A1-202ENST00000377843 CCDC129Q6ZRS4 1044 aa18.05■□□□□ 0.48
CSNK1A1-202ENST00000377843 DNAAF4Q8WXU2 420 aa18.05■□□□□ 0.48
CSNK1A1-202ENST00000377843 PPM1EQ8WY54 764 aa18.05■□□□□ 0.48
CSNK1A1-202ENST00000377843 MYH15Q9Y2K3 1946 aa18.05■□□□□ 0.48
CSNK1A1-202ENST00000377843 ADAMTSL3P82987 1691 aa18.05■□□□□ 0.48
CSNK1A1-202ENST00000377843 OVOS2A0A0J9YW53 1432 aa18.05■□□□□ 0.48
CSNK1A1-202ENST00000377843 OVOS2Q6IE36 1432 aa18.05■□□□□ 0.48
CSNK1A1-202ENST00000377843 IKBKBO14920 756 aa18.05■□□□□ 0.48
CSNK1A1-202ENST00000377843 CYP21A2P08686 494 aa18.05■□□□□ 0.48
CSNK1A1-202ENST00000377843 JAKMIP3Q5VZ66 844 aa18.05■□□□□ 0.48
CSNK1A1-202ENST00000377843 OTUD7BQ6GQQ9 843 aa18.05■□□□□ 0.48
CSNK1A1-202ENST00000377843 LINC00301Q8NCQ3 95 aa18.05■□□□□ 0.48
CSNK1A1-202ENST00000377843 HNRNPLLQ8WVV9 542 aaKnown RBP18.05■□□□□ 0.48
CSNK1A1-202ENST00000377843 EYA1Q99502 592 aa18.05■□□□□ 0.48
CSNK1A1-202ENST00000377843 LLPHQ9BRT6 129 aaKnown RBP18.05■□□□□ 0.48
CSNK1A1-202ENST00000377843 BICC1Q9H694 974 aaKnown RBP18.05■□□□□ 0.48
CSNK1A1-202ENST00000377843 RTEL1Q9NZ71 1219 aa18.05■□□□□ 0.48
CSNK1A1-202ENST00000377843 A0A0U1RQJ8 604 aa18.04■□□□□ 0.48
CSNK1A1-202ENST00000377843 TOP1P11387 765 aaKnown RBP18.04■□□□□ 0.48
CSNK1A1-202ENST00000377843 CHMP4BP1P59074 171 aa18.04■□□□□ 0.48
CSNK1A1-202ENST00000377843 CT47A1Q5JQC4 288 aaPredicted RBP18.04■□□□□ 0.48
CSNK1A1-202ENST00000377843 HDXQ7Z353 690 aa18.04■□□□□ 0.48
CSNK1A1-202ENST00000377843 ATRIPQ8WXE1 791 aa18.04■□□□□ 0.48
CSNK1A1-202ENST00000377843 MRPL44Q9H9J2 332 aaKnown RBP18.04■□□□□ 0.48
CSNK1A1-202ENST00000377843 RNF216Q9NWF9 866 aaPredicted RBP18.04■□□□□ 0.48
CSNK1A1-202ENST00000377843 HDAC5Q9UQL6 1122 aa18.04■□□□□ 0.48
CSNK1A1-202ENST00000377843 ZNF202O95125 648 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms