RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 FAM205AQ6ZU69 1335 aa27.44■■□□□ 1.98
SRM-201ENST00000376957 PITPNM2Q9BZ72 1349 aa27.44■■□□□ 1.98
SRM-201ENST00000376957 ANGEL2Q5VTE6 544 aaKnown RBP27.44■■□□□ 1.98
SRM-201ENST00000376957 FBXO33Q7Z6M2 555 aa27.44■■□□□ 1.98
SRM-201ENST00000376957 JMYQ8N9B5 988 aa27.44■■□□□ 1.98
SRM-201ENST00000376957 RCAN3Q9UKA8 241 aa27.44■■□□□ 1.98
SRM-201ENST00000376957 MYO1BO43795 1136 aa27.43■■□□□ 1.98
SRM-201ENST00000376957 ATG9AQ7Z3C6 839 aa27.43■■□□□ 1.98
SRM-201ENST00000376957 TBC1D22AQ8WUA7 517 aa27.43■■□□□ 1.98
SRM-201ENST00000376957 GNL3LQ9NVN8 582 aaKnown RBP27.43■■□□□ 1.98
SRM-201ENST00000376957 CNTNAP1P78357 1384 aa27.43■■□□□ 1.98
SRM-201ENST00000376957 DLGAP5Q15398 846 aa27.42■■□□□ 1.98
SRM-201ENST00000376957 ATP2B3Q16720 1220 aa27.42■■□□□ 1.98
SRM-201ENST00000376957 MFSD14BQ5SR56 506 aa27.42■■□□□ 1.98
SRM-201ENST00000376957 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.42■■□□□ 1.98
SRM-201ENST00000376957 CHMP4BQ9H444 224 aaKnown RBP27.42■■□□□ 1.98
SRM-201ENST00000376957 AKAP2Q9Y2D5 859 aa27.42■■□□□ 1.98
SRM-201ENST00000376957 FGFR2P21802 821 aa27.41■■□□□ 1.98
SRM-201ENST00000376957 ECE1P42892 770 aa27.41■■□□□ 1.98
SRM-201ENST00000376957 CST9Q5W186 159 aa27.41■■□□□ 1.98
SRM-201ENST00000376957 RASSF10A6NK89 507 aa27.4■■□□□ 1.98
SRM-201ENST00000376957 G3BP1Q13283 466 aaKnown RBP eCLIP27.4■■□□□ 1.98
SRM-201ENST00000376957 PAXIP1Q6ZW49 1069 aaPredicted RBP27.4■■□□□ 1.98
SRM-201ENST00000376957 PA2G4Q9UQ80 394 aaKnown RBP27.4■■□□□ 1.98
SRM-201ENST00000376957 F8W031 263 aaPredicted RBP27.39■■□□□ 1.98
SRM-201ENST00000376957 WNT10BO00744 389 aa27.39■■□□□ 1.98
SRM-201ENST00000376957 BCAMP50895 628 aa27.39■■□□□ 1.98
SRM-201ENST00000376957 RBM5P52756 815 aaKnown RBP eCLIP27.39■■□□□ 1.98
SRM-201ENST00000376957 C2orf69Q8N8R5 385 aa27.39■■□□□ 1.98
SRM-201ENST00000376957 JAG2Q9Y219 1238 aa27.39■■□□□ 1.98
SRM-201ENST00000376957 TLL2Q9Y6L7 1015 aa27.39■■□□□ 1.98
SRM-201ENST00000376957 FMR1Q06787 632 aaKnown RBP eCLIP27.38■■□□□ 1.97
SRM-201ENST00000376957 NBPF9Q3BBW0 867 aa27.38■■□□□ 1.97
SRM-201ENST00000376957 CERS5Q8N5B7 392 aa27.38■■□□□ 1.97
SRM-201ENST00000376957 POLR2AP24928 1970 aaKnown RBP27.38■■□□□ 1.97
SRM-201ENST00000376957 ZNF646O15015 1829 aaPredicted RBP27.37■■□□□ 1.97
SRM-201ENST00000376957 ADM5C9JUS6 153 aa27.37■■□□□ 1.97
SRM-201ENST00000376957 CHAF1AQ13111 956 aaPredicted RBP27.37■■□□□ 1.97
SRM-201ENST00000376957 APOBEC3FQ8IUX4 373 aaKnown RBP27.37■■□□□ 1.97
SRM-201ENST00000376957 ZBTB7BO15156 539 aaPredicted RBP27.36■■□□□ 1.97
SRM-201ENST00000376957 NF2P35240 595 aa27.36■■□□□ 1.97
SRM-201ENST00000376957 MTMR14Q8NCE2 650 aa27.36■■□□□ 1.97
SRM-201ENST00000376957 HHIPL1Q96JK4 782 aa27.36■■□□□ 1.97
SRM-201ENST00000376957 TTF2Q9UNY4 1162 aaKnown RBP27.36■■□□□ 1.97
SRM-201ENST00000376957 IQSEC3Q9UPP2 1182 aaPredicted RBP27.36■■□□□ 1.97
SRM-201ENST00000376957 RLBP1P12271 317 aa27.35■■□□□ 1.97
SRM-201ENST00000376957 ATP8B2P98198 1209 aa27.35■■□□□ 1.97
SRM-201ENST00000376957 SAPCD2Q86UD0 394 aa27.35■■□□□ 1.97
SRM-201ENST00000376957 WDR66Q8TBY9 1149 aa27.35■■□□□ 1.97
SRM-201ENST00000376957 GBA2Q9HCG7 927 aaPredicted RBP27.35■■□□□ 1.97
SRM-201ENST00000376957 SERPINA10Q9UK55 444 aa27.35■■□□□ 1.97
SRM-201ENST00000376957 SUGT1Q9Y2Z0 365 aa27.35■■□□□ 1.97
SRM-201ENST00000376957 VEGFBP49765 207 aa27.34■■□□□ 1.97
SRM-201ENST00000376957 OS9Q13438 667 aaPredicted RBP27.34■■□□□ 1.97
SRM-201ENST00000376957 MAST3O60307 1309 aa27.34■■□□□ 1.97
SRM-201ENST00000376957 ASTN2O75129 1339 aaPredicted RBP27.34■■□□□ 1.97
SRM-201ENST00000376957 SEMA3EO15041 775 aa27.33■■□□□ 1.97
SRM-201ENST00000376957 CFAP100Q494V2 611 aa27.33■■□□□ 1.97
SRM-201ENST00000376957 PANK1Q8TE04 598 aa27.33■■□□□ 1.97
SRM-201ENST00000376957 CDCA5Q96FF9 252 aa27.33■■□□□ 1.97
SRM-201ENST00000376957 DDX19BQ9UMR2 479 aa27.33■■□□□ 1.97
SRM-201ENST00000376957 WDR33Q9C0J8 1336 aaKnown RBP27.33■■□□□ 1.97
SRM-201ENST00000376957 PNMA6EA0A0J9YXQ4 647 aa27.32■■□□□ 1.96
SRM-201ENST00000376957 FKBP1BP68106 108 aa27.32■■□□□ 1.96
SRM-201ENST00000376957 TFCP2Q12800 502 aa27.31■■□□□ 1.96
SRM-201ENST00000376957 MVPQ14764 893 aaKnown RBP27.31■■□□□ 1.96
SRM-201ENST00000376957 GORABQ5T7V8 394 aa27.31■■□□□ 1.96
SRM-201ENST00000376957 CAPNS2Q96L46 248 aa27.31■■□□□ 1.96
SRM-201ENST00000376957 DENND2AQ9ULE3 1009 aa27.31■■□□□ 1.96
SRM-201ENST00000376957 SPDYE2BA6NHP3 402 aa27.3■■□□□ 1.96
SRM-201ENST00000376957 SPDYE6P0CI01 402 aa27.3■■□□□ 1.96
SRM-201ENST00000376957 HUNKP57058 714 aa27.3■■□□□ 1.96
SRM-201ENST00000376957 HDLBPQ00341 1268 aaKnown RBP27.3■■□□□ 1.96
SRM-201ENST00000376957 GRM1Q13255 1194 aa27.3■■□□□ 1.96
SRM-201ENST00000376957 SSH3Q8TE77 659 aa27.3■■□□□ 1.96
SRM-201ENST00000376957 ZBED3Q96IU2 234 aaPredicted RBP27.3■■□□□ 1.96
SRM-201ENST00000376957 NEUROD6Q96NK8 337 aa27.3■■□□□ 1.96
SRM-201ENST00000376957 SURF6O75683 361 aaKnown RBP27.29■■□□□ 1.96
SRM-201ENST00000376957 MAP2K1Q02750 393 aaPredicted RBP27.29■■□□□ 1.96
SRM-201ENST00000376957 TNFAIP1Q13829 316 aa27.29■■□□□ 1.96
SRM-201ENST00000376957 POLA2Q14181 598 aa27.29■■□□□ 1.96
SRM-201ENST00000376957 ZGPATQ8N5A5 531 aaKnown RBP27.29■■□□□ 1.96
SRM-201ENST00000376957 AIDAQ96BJ3 306 aa27.29■■□□□ 1.96
SRM-201ENST00000376957 C1orf115Q9H7X2 142 aa27.29■■□□□ 1.96
SRM-201ENST00000376957 PPP2R3BQ9Y5P8 575 aa27.29■■□□□ 1.96
SRM-201ENST00000376957 MYH13Q9UKX3 1938 aa27.28■■□□□ 1.96
SRM-201ENST00000376957 A0A1B0GUL7 405 aa27.28■■□□□ 1.96
SRM-201ENST00000376957 TIMM10P62072 90 aa27.28■■□□□ 1.96
SRM-201ENST00000376957 TEKT1Q969V4 418 aa27.28■■□□□ 1.96
SRM-201ENST00000376957 MRIQ9BWK5 157 aa27.28■■□□□ 1.96
SRM-201ENST00000376957 ARAP2Q8WZ64 1704 aa27.27■■□□□ 1.96
SRM-201ENST00000376957 COL1A1P02452 1464 aaPredicted RBP27.27■■□□□ 1.96
SRM-201ENST00000376957 PDE3AQ14432 1141 aa27.27■■□□□ 1.96
SRM-201ENST00000376957 CYP4F22Q6NT55 531 aa27.27■■□□□ 1.96
SRM-201ENST00000376957 BEGAINQ9BUH8 593 aa27.27■■□□□ 1.96
SRM-201ENST00000376957 MAP2K2P36507 400 aa27.26■■□□□ 1.95
SRM-201ENST00000376957 CRKP46108 304 aa27.26■■□□□ 1.95
SRM-201ENST00000376957 TTLL12Q14166 644 aaPredicted RBP27.26■■□□□ 1.95
SRM-201ENST00000376957 CCDC102BQ68D86 513 aa27.26■■□□□ 1.95
SRM-201ENST00000376957 DLK2Q6UY11 383 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms