RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 LEO1Q8WVC0 666 aaPredicted RBP13.6□□□□□ -0.23
DDR1-227ENST00000376570 CLIP2Q9UDT6 1046 aa13.6□□□□□ -0.23
DDR1-227ENST00000376570 ERCC3P19447 782 aa13.59□□□□□ -0.23
DDR1-227ENST00000376570 IARSP41252 1262 aaKnown RBP13.59□□□□□ -0.23
DDR1-227ENST00000376570 EEF2KMTQ96G04 330 aa13.59□□□□□ -0.23
DDR1-227ENST00000376570 NACAP1Q9BZK3 213 aa13.59□□□□□ -0.23
DDR1-227ENST00000376570 COPRSQ9NQ92 184 aa13.59□□□□□ -0.23
DDR1-227ENST00000376570 SRCAPQ6ZRS2 3230 aa13.59□□□□□ -0.23
DDR1-227ENST00000376570 SPATA31A3Q5VYP0 1347 aa13.59□□□□□ -0.23
DDR1-227ENST00000376570 SART3Q15020 963 aaKnown RBP13.59□□□□□ -0.23
DDR1-227ENST00000376570 KIF24Q5T7B8 1368 aa13.59□□□□□ -0.23
DDR1-227ENST00000376570 USP5P45974 858 aa13.59□□□□□ -0.23
DDR1-227ENST00000376570 BABAM1Q9NWV8 329 aa13.59□□□□□ -0.23
DDR1-227ENST00000376570 SRP68Q9UHB9 627 aaKnown RBP13.59□□□□□ -0.23
DDR1-227ENST00000376570 STX8Q9UNK0 236 aa13.59□□□□□ -0.23
DDR1-227ENST00000376570 ZKSCAN5Q9Y2L8 839 aa13.58□□□□□ -0.23
DDR1-227ENST00000376570 WDR17Q8IZU2 1322 aa13.58□□□□□ -0.24
DDR1-227ENST00000376570 C6orf229H3BNL8 230 aa13.58□□□□□ -0.24
DDR1-227ENST00000376570 RIMBP2O15034 1052 aa13.58□□□□□ -0.24
DDR1-227ENST00000376570 CLSTN1O94985 981 aa13.58□□□□□ -0.24
DDR1-227ENST00000376570 TOB2Q14106 344 aaPredicted RBP13.58□□□□□ -0.24
DDR1-227ENST00000376570 MFSD6Q6ZSS7 791 aa13.58□□□□□ -0.24
DDR1-227ENST00000376570 STX17P56962 302 aa13.58□□□□□ -0.24
DDR1-227ENST00000376570 CCDC102BQ68D86 513 aa13.58□□□□□ -0.24
DDR1-227ENST00000376570 HAUS7Q99871 368 aa13.58□□□□□ -0.24
DDR1-227ENST00000376570 UTP14AQ9BVJ6 771 aaKnown RBP13.58□□□□□ -0.24
DDR1-227ENST00000376570 SAP30BPQ9UHR5 308 aaKnown RBP13.58□□□□□ -0.24
DDR1-227ENST00000376570 EIF6P56537 245 aaKnown RBP13.57□□□□□ -0.24
DDR1-227ENST00000376570 CUL4AQ13619 759 aa13.57□□□□□ -0.24
DDR1-227ENST00000376570 FAM47AQ5JRC9 791 aa13.57□□□□□ -0.24
DDR1-227ENST00000376570 ATG3Q9NT62 314 aa13.57□□□□□ -0.24
DDR1-227ENST00000376570 ZBTB43O43298 467 aa13.57□□□□□ -0.24
DDR1-227ENST00000376570 RBM5P52756 815 aaKnown RBP eCLIP13.57□□□□□ -0.24
DDR1-227ENST00000376570 CFAP100Q494V2 611 aa13.57□□□□□ -0.24
DDR1-227ENST00000376570 TRIM22Q8IYM9 498 aa13.57□□□□□ -0.24
DDR1-227ENST00000376570 CLIC6Q96NY7 704 aa13.57□□□□□ -0.24
DDR1-227ENST00000376570 HMG20BQ9P0W2 317 aa13.57□□□□□ -0.24
DDR1-227ENST00000376570 LMTK3Q96Q04 1460 aa13.57□□□□□ -0.24
DDR1-227ENST00000376570 NRDCO43847 1150 aa13.56□□□□□ -0.24
DDR1-227ENST00000376570 TPM4P67936 248 aa13.56□□□□□ -0.24
DDR1-227ENST00000376570 DZIP1Q86YF9 867 aaKnown RBP13.56□□□□□ -0.24
DDR1-227ENST00000376570 PCMTD1Q96MG8 357 aaPredicted RBP13.56□□□□□ -0.24
DDR1-227ENST00000376570 AATFQ9NY61 560 aaKnown RBP eCLIP13.56□□□□□ -0.24
DDR1-227ENST00000376570 BAZ2BQ9UIF8 2168 aaKnown RBP13.56□□□□□ -0.24
DDR1-227ENST00000376570 PIH1D3Q9NQM4 214 aaKnown RBP13.56□□□□□ -0.24
DDR1-227ENST00000376570 MAPK8IP1Q9UQF2 711 aa13.56□□□□□ -0.24
DDR1-227ENST00000376570 SPATA31D1Q6ZQQ2 1576 aa13.56□□□□□ -0.24
DDR1-227ENST00000376570 GOLGA8FQ08AF8 430 aa13.56□□□□□ -0.24
DDR1-227ENST00000376570 GOLGA8DPQ0D2H9 430 aa13.56□□□□□ -0.24
DDR1-227ENST00000376570 IKQ13123 557 aaPredicted RBP13.56□□□□□ -0.24
DDR1-227ENST00000376570 ZNF827Q17R98 1081 aa13.56□□□□□ -0.24
DDR1-227ENST00000376570 CAVIN4Q5BKX8 364 aa13.56□□□□□ -0.24
DDR1-227ENST00000376570 SH3TC1Q8TE82 1336 aa13.56□□□□□ -0.24
DDR1-227ENST00000376570 MCAMP43121 646 aa13.55□□□□□ -0.24
DDR1-227ENST00000376570 ZNF445P59923 1031 aa13.55□□□□□ -0.24
DDR1-227ENST00000376570 PICALMQ13492 652 aa13.55□□□□□ -0.24
DDR1-227ENST00000376570 TMC6Q7Z403 805 aa13.55□□□□□ -0.24
DDR1-227ENST00000376570 NOL10Q9BSC4 688 aaKnown RBP13.55□□□□□ -0.24
DDR1-227ENST00000376570 SENP2Q9HC62 589 aa13.55□□□□□ -0.24
DDR1-227ENST00000376570 CRKLP46109 303 aaKnown RBP13.55□□□□□ -0.24
DDR1-227ENST00000376570 CTSWP56202 376 aa13.55□□□□□ -0.24
DDR1-227ENST00000376570 FOXO4P98177 505 aa13.55□□□□□ -0.24
DDR1-227ENST00000376570 ARID5BQ14865 1188 aa13.55□□□□□ -0.24
DDR1-227ENST00000376570 PPP4R3BQ5MIZ7 849 aa13.55□□□□□ -0.24
DDR1-227ENST00000376570 SUSD4Q5VX71 490 aa13.55□□□□□ -0.24
DDR1-227ENST00000376570 ANKRD18AQ8IVF6 992 aa13.55□□□□□ -0.24
DDR1-227ENST00000376570 GTF3C6Q969F1 213 aa13.55□□□□□ -0.24
DDR1-227ENST00000376570 TTC14Q96N46 770 aa13.55□□□□□ -0.24
DDR1-227ENST00000376570 GNL3LQ9NVN8 582 aaKnown RBP13.55□□□□□ -0.24
DDR1-227ENST00000376570 C1orf167Q5SNV9 1468 aa13.55□□□□□ -0.24
DDR1-227ENST00000376570 HEG1Q9ULI3 1381 aa13.55□□□□□ -0.24
DDR1-227ENST00000376570 DYNLL1P63167 89 aaKnown RBP13.55□□□□□ -0.24
DDR1-227ENST00000376570 NLRP10Q86W26 655 aa13.55□□□□□ -0.24
DDR1-227ENST00000376570 ZSWIM4Q9H7M6 989 aa13.55□□□□□ -0.24
DDR1-227ENST00000376570 CLIC4Q9Y696 253 aa13.55□□□□□ -0.24
DDR1-227ENST00000376570 ATG9AQ7Z3C6 839 aa13.54□□□□□ -0.24
DDR1-227ENST00000376570 CBX8Q9HC52 389 aa13.54□□□□□ -0.24
DDR1-227ENST00000376570 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.54□□□□□ -0.24
DDR1-227ENST00000376570 ADGRB2O60241 1585 aa13.54□□□□□ -0.24
DDR1-227ENST00000376570 SMIM22K7EJ46 135 aa13.54□□□□□ -0.24
DDR1-227ENST00000376570 SLC3A2P08195 630 aaKnown RBP13.54□□□□□ -0.24
DDR1-227ENST00000376570 ZSCAN25Q6NSZ9 544 aa13.54□□□□□ -0.24
DDR1-227ENST00000376570 CEP57L1Q8IYX8 460 aa13.54□□□□□ -0.24
DDR1-227ENST00000376570 MKNK2Q9HBH9 465 aa13.54□□□□□ -0.24
DDR1-227ENST00000376570 TSPY2A6NKD2 308 aa13.54□□□□□ -0.24
DDR1-227ENST00000376570 PDE6AP16499 860 aa13.54□□□□□ -0.24
DDR1-227ENST00000376570 WTAPQ15007 396 aa13.54□□□□□ -0.24
DDR1-227ENST00000376570 CCDC152Q4G0S7 254 aa13.54□□□□□ -0.24
DDR1-227ENST00000376570 ZSCAN29Q8IWY8 852 aaPredicted RBP13.54□□□□□ -0.24
DDR1-227ENST00000376570 GOLGB1Q14789 3259 aaKnown RBP13.53□□□□□ -0.24
DDR1-227ENST00000376570 SSBP05455 408 aaKnown RBP eCLIP13.53□□□□□ -0.24
DDR1-227ENST00000376570 LOC102724428A0A0B4J2F2 783 aa13.53□□□□□ -0.24
DDR1-227ENST00000376570 PDIA3P30101 505 aaKnown RBP13.53□□□□□ -0.24
DDR1-227ENST00000376570 SIK1P57059 783 aa13.53□□□□□ -0.24
DDR1-227ENST00000376570 NOLC1Q14978 699 aaKnown RBP eCLIP13.53□□□□□ -0.24
DDR1-227ENST00000376570 CNNM3Q8NE01 707 aa13.53□□□□□ -0.24
DDR1-227ENST00000376570 TTLL11Q8NHH1 800 aa13.53□□□□□ -0.24
DDR1-227ENST00000376570 APPBP2Q92624 585 aa13.53□□□□□ -0.24
DDR1-227ENST00000376570 MPHOSPH10O00566 681 aaKnown RBP13.53□□□□□ -0.24
DDR1-227ENST00000376570 RFC4P35249 363 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms