RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 ATP8B2P98198 1209 aa22.37■■□□□ 1.17
COL15A1-201ENST00000375001 CARD6Q9BX69 1037 aa22.37■■□□□ 1.17
COL15A1-201ENST00000375001 HGSO14964 777 aaPredicted RBP22.37■■□□□ 1.17
COL15A1-201ENST00000375001 PER1O15534 1290 aaPredicted RBP22.37■■□□□ 1.17
COL15A1-201ENST00000375001 VAMP4O75379 141 aa22.37■■□□□ 1.17
COL15A1-201ENST00000375001 TTC21AQ8NDW8 1320 aa22.36■■□□□ 1.17
COL15A1-201ENST00000375001 SPTLC2O15270 562 aa22.36■■□□□ 1.17
COL15A1-201ENST00000375001 CCDC122Q5T0U0 273 aa22.36■■□□□ 1.17
COL15A1-201ENST00000375001 NKIRAS1Q9NYS0 192 aa22.36■■□□□ 1.17
COL15A1-201ENST00000375001 ADGRL1O94910 1474 aa22.36■■□□□ 1.17
COL15A1-201ENST00000375001 WDHD1O75717 1129 aaPredicted RBP22.36■■□□□ 1.17
COL15A1-201ENST00000375001 KDM2BQ8NHM5 1336 aa22.36■■□□□ 1.17
COL15A1-201ENST00000375001 NBPF7P0C2Y1 421 aaPredicted RBP22.36■■□□□ 1.17
COL15A1-201ENST00000375001 ANKLE2Q86XL3 938 aa22.36■■□□□ 1.17
COL15A1-201ENST00000375001 SETSIPP0DME0 302 aa22.35■■□□□ 1.17
COL15A1-201ENST00000375001 CEP85Q6P2H3 762 aa22.35■■□□□ 1.17
COL15A1-201ENST00000375001 MFSD6Q6ZSS7 791 aa22.35■■□□□ 1.17
COL15A1-201ENST00000375001 USP26Q9BXU7 913 aa22.35■■□□□ 1.17
COL15A1-201ENST00000375001 ZBTB3Q9H5J0 574 aa22.35■■□□□ 1.17
COL15A1-201ENST00000375001 UGGT2Q9NYU1 1516 aa22.35■■□□□ 1.17
COL15A1-201ENST00000375001 PPARDQ03181 441 aa22.35■■□□□ 1.17
COL15A1-201ENST00000375001 AK2P54819 239 aa22.35■■□□□ 1.17
COL15A1-201ENST00000375001 PABPN1LA6NDY0 278 aaKnown RBP22.35■■□□□ 1.17
COL15A1-201ENST00000375001 ASIC1P78348 528 aa22.35■■□□□ 1.17
COL15A1-201ENST00000375001 CCDC50Q8IVM0 306 aa22.35■■□□□ 1.17
COL15A1-201ENST00000375001 GBP1P32455 592 aa22.34■■□□□ 1.17
COL15A1-201ENST00000375001 VCX3BQ9H321 246 aa22.34■■□□□ 1.17
COL15A1-201ENST00000375001 OAS2P29728 719 aaKnown RBP22.34■■□□□ 1.17
COL15A1-201ENST00000375001 TSNAXIP1Q2TAA8 658 aa22.34■■□□□ 1.17
COL15A1-201ENST00000375001 CARD14Q9BXL6 1004 aa22.34■■□□□ 1.17
COL15A1-201ENST00000375001 SYNCQ9H7C4 482 aa22.34■■□□□ 1.17
COL15A1-201ENST00000375001 MRVI1Q9Y6F6 885 aa22.34■■□□□ 1.17
COL15A1-201ENST00000375001 NDC80O14777 642 aa22.34■■□□□ 1.17
COL15A1-201ENST00000375001 EEF2P13639 858 aaKnown RBP22.34■■□□□ 1.17
COL15A1-201ENST00000375001 NPHP3Q7Z494 1330 aa22.34■■□□□ 1.17
COL15A1-201ENST00000375001 ARHGAP25P42331 645 aa22.34■■□□□ 1.17
COL15A1-201ENST00000375001 KRT24Q2M2I5 525 aa22.34■■□□□ 1.17
COL15A1-201ENST00000375001 GBP7Q8N8V2 638 aaPredicted RBP22.34■■□□□ 1.17
COL15A1-201ENST00000375001 CHPF2Q9P2E5 772 aa22.34■■□□□ 1.17
COL15A1-201ENST00000375001 CALCOCO2Q13137 446 aa22.33■■□□□ 1.17
COL15A1-201ENST00000375001 PPP1R7Q15435 360 aa22.33■■□□□ 1.17
COL15A1-201ENST00000375001 BMP15O95972 392 aa22.33■■□□□ 1.17
COL15A1-201ENST00000375001 CABS1Q96KC9 395 aa22.33■■□□□ 1.16
COL15A1-201ENST00000375001 ZNF853P0CG23 659 aa22.33■■□□□ 1.16
COL15A1-201ENST00000375001 PDE1CQ14123 709 aaPredicted RBP22.33■■□□□ 1.16
COL15A1-201ENST00000375001 Q6ZUG5 572 aa22.33■■□□□ 1.16
COL15A1-201ENST00000375001 BANK1Q8NDB2 785 aa22.33■■□□□ 1.16
COL15A1-201ENST00000375001 KAT14Q9H8E8 782 aa22.32■■□□□ 1.16
COL15A1-201ENST00000375001 CASQ2O14958 399 aaPredicted RBP22.32■■□□□ 1.16
COL15A1-201ENST00000375001 GCKP35557 465 aa22.32■■□□□ 1.16
COL15A1-201ENST00000375001 CCDC38Q502W7 563 aa22.32■■□□□ 1.16
COL15A1-201ENST00000375001 TMOD2Q9NZR1 351 aa22.32■■□□□ 1.16
COL15A1-201ENST00000375001 TSPY2A6NKD2 308 aa22.32■■□□□ 1.16
COL15A1-201ENST00000375001 ZBTB43O43298 467 aa22.32■■□□□ 1.16
COL15A1-201ENST00000375001 CFAP157Q5JU67 520 aa22.32■■□□□ 1.16
COL15A1-201ENST00000375001 SLC5A1P13866 664 aa22.32■■□□□ 1.16
COL15A1-201ENST00000375001 SSX2IPQ9Y2D8 614 aa22.32■■□□□ 1.16
COL15A1-201ENST00000375001 BIVM-ERCC5R4GMW8 1640 aa22.31■■□□□ 1.16
COL15A1-201ENST00000375001 MICAL1Q8TDZ2 1067 aa22.31■■□□□ 1.16
COL15A1-201ENST00000375001 AMOTL2Q9Y2J4 779 aa22.31■■□□□ 1.16
COL15A1-201ENST00000375001 GRIN2AQ12879 1464 aa22.31■■□□□ 1.16
COL15A1-201ENST00000375001 DCAF8L1A6NGE4 600 aa22.31■■□□□ 1.16
COL15A1-201ENST00000375001 PPM1FP49593 454 aaPredicted RBP22.31■■□□□ 1.16
COL15A1-201ENST00000375001 NEK11Q8NG66 645 aa22.31■■□□□ 1.16
COL15A1-201ENST00000375001 ACEP12821 1306 aa22.31■■□□□ 1.16
COL15A1-201ENST00000375001 AKR1B15C9JRZ8 316 aaPredicted RBP22.31■■□□□ 1.16
COL15A1-201ENST00000375001 CNGA4Q8IV77 575 aa22.31■■□□□ 1.16
COL15A1-201ENST00000375001 BAIAP2L1Q9UHR4 511 aa22.31■■□□□ 1.16
COL15A1-201ENST00000375001 SAMM50Q9Y512 469 aa22.31■■□□□ 1.16
COL15A1-201ENST00000375001 ZSCAN26Q16670 478 aa22.3■■□□□ 1.16
COL15A1-201ENST00000375001 VCXQ9H320 206 aa22.3■■□□□ 1.16
COL15A1-201ENST00000375001 MKRN1Q9UHC7 482 aaKnown RBP22.3■■□□□ 1.16
COL15A1-201ENST00000375001 PHF8Q9UPP1 1060 aa22.3■■□□□ 1.16
COL15A1-201ENST00000375001 GIGYF1O75420 1035 aaPredicted RBP22.3■■□□□ 1.16
COL15A1-201ENST00000375001 ARHGEF2Q92974 986 aaKnown RBP22.3■■□□□ 1.16
COL15A1-201ENST00000375001 NAPGQ99747 312 aaPredicted RBP22.3■■□□□ 1.16
COL15A1-201ENST00000375001 RBM28Q9NW13 759 aaKnown RBP22.3■■□□□ 1.16
COL15A1-201ENST00000375001 TRMT112Q9UI30 125 aaKnown RBP22.3■■□□□ 1.16
COL15A1-201ENST00000375001 PIK3C2GO75747 1445 aa22.3■■□□□ 1.16
COL15A1-201ENST00000375001 ATP6V0A2Q9Y487 856 aa22.3■■□□□ 1.16
COL15A1-201ENST00000375001 SMC1BQ8NDV3 1235 aa22.3■■□□□ 1.16
COL15A1-201ENST00000375001 FOXO3O43524 673 aa22.29■■□□□ 1.16
COL15A1-201ENST00000375001 SF3A3Q12874 501 aaKnown RBP eCLIP22.29■■□□□ 1.16
COL15A1-201ENST00000375001 ERCC3P19447 782 aa22.29■■□□□ 1.16
COL15A1-201ENST00000375001 GPTP24298 496 aa22.29■■□□□ 1.16
COL15A1-201ENST00000375001 NMIQ13287 307 aaPredicted RBP22.29■■□□□ 1.16
COL15A1-201ENST00000375001 WTAPQ15007 396 aa22.29■■□□□ 1.16
COL15A1-201ENST00000375001 VSIG1Q86XK7 387 aa22.29■■□□□ 1.16
COL15A1-201ENST00000375001 BICD1Q96G01 975 aa22.29■■□□□ 1.16
COL15A1-201ENST00000375001 PA2G4Q9UQ80 394 aaKnown RBP22.29■■□□□ 1.16
COL15A1-201ENST00000375001 C8orf74Q6P047 294 aa22.29■■□□□ 1.16
COL15A1-201ENST00000375001 MYCBPQ99417 103 aaPredicted RBP22.29■■□□□ 1.16
COL15A1-201ENST00000375001 EHMT1Q9H9B1 1298 aa22.29■■□□□ 1.16
COL15A1-201ENST00000375001 TMOD3Q9NYL9 352 aa22.29■■□□□ 1.16
COL15A1-201ENST00000375001 GKAP1Q5VSY0 366 aaPredicted RBP22.29■■□□□ 1.16
COL15A1-201ENST00000375001 FMNL3Q8IVF7 1028 aa22.29■■□□□ 1.16
COL15A1-201ENST00000375001 TSC1Q92574 1164 aa22.29■■□□□ 1.16
COL15A1-201ENST00000375001 POLKQ9UBT6 870 aa22.29■■□□□ 1.16
COL15A1-201ENST00000375001 TMCO4Q5TGY1 634 aa22.28■■□□□ 1.16
COL15A1-201ENST00000375001 INTS4Q96HW7 963 aaKnown RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms