RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 PODNQ7Z5L7 613 aa13.64□□□□□ -0.23
HLA-DQA1-202ENST00000374949 CDC5LQ99459 802 aaKnown RBP13.64□□□□□ -0.23
HLA-DQA1-202ENST00000374949 RWDD1Q9H446 243 aaPredicted RBP13.64□□□□□ -0.23
HLA-DQA1-202ENST00000374949 GREM2Q9H772 168 aa13.64□□□□□ -0.23
HLA-DQA1-202ENST00000374949 HPS5Q9UPZ3 1129 aa13.64□□□□□ -0.23
HLA-DQA1-202ENST00000374949 PCDHB15Q9Y5E8 787 aa13.64□□□□□ -0.23
HLA-DQA1-202ENST00000374949 A0A1B0GUL6 1792 aa13.63□□□□□ -0.23
HLA-DQA1-202ENST00000374949 TBC1D8O95759 1140 aa13.63□□□□□ -0.23
HLA-DQA1-202ENST00000374949 IGKV5-2P06315 115 aa13.63□□□□□ -0.23
HLA-DQA1-202ENST00000374949 DACT2Q5SW24 774 aa13.63□□□□□ -0.23
HLA-DQA1-202ENST00000374949 CENPQQ7L2Z9 268 aaPredicted RBP13.63□□□□□ -0.23
HLA-DQA1-202ENST00000374949 REM2Q8IYK8 340 aaPredicted RBP13.63□□□□□ -0.23
HLA-DQA1-202ENST00000374949 ZNF296Q8WUU4 475 aaPredicted RBP13.63□□□□□ -0.23
HLA-DQA1-202ENST00000374949 SRCIN1Q9C0H9 1055 aa13.63□□□□□ -0.23
HLA-DQA1-202ENST00000374949 MINPP1Q9UNW1 487 aa13.63□□□□□ -0.23
HLA-DQA1-202ENST00000374949 KLRK1P26718 216 aa13.62□□□□□ -0.23
HLA-DQA1-202ENST00000374949 BEND3Q5T5X7 828 aa13.62□□□□□ -0.23
HLA-DQA1-202ENST00000374949 TXNRD3Q86VQ6 643 aa13.62□□□□□ -0.23
HLA-DQA1-202ENST00000374949 TTLL11Q8NHH1 800 aa13.62□□□□□ -0.23
HLA-DQA1-202ENST00000374949 HDAC9Q9UKV0 1011 aa13.62□□□□□ -0.23
HLA-DQA1-202ENST00000374949 WNT10BO00744 389 aa13.61□□□□□ -0.23
HLA-DQA1-202ENST00000374949 ALDH1L1O75891 902 aa13.61□□□□□ -0.23
HLA-DQA1-202ENST00000374949 IGHDP01880 384 aa13.61□□□□□ -0.23
HLA-DQA1-202ENST00000374949 GNAI3P08754 354 aa13.61□□□□□ -0.23
HLA-DQA1-202ENST00000374949 PRKG1Q13976 671 aa13.61□□□□□ -0.23
HLA-DQA1-202ENST00000374949 CWF19L2Q2TBE0 894 aaKnown RBP13.61□□□□□ -0.23
HLA-DQA1-202ENST00000374949 BSDC1Q9NW68 430 aaPredicted RBP13.61□□□□□ -0.23
HLA-DQA1-202ENST00000374949 MYO3BQ8WXR4 1341 aa13.61□□□□□ -0.23
HLA-DQA1-202ENST00000374949 ECM29Q5VYK3 1845 aa13.6□□□□□ -0.23
HLA-DQA1-202ENST00000374949 NF2P35240 595 aa13.6□□□□□ -0.23
HLA-DQA1-202ENST00000374949 NEXNQ0ZGT2 675 aa13.6□□□□□ -0.23
HLA-DQA1-202ENST00000374949 STRIP1Q5VSL9 837 aa13.6□□□□□ -0.23
HLA-DQA1-202ENST00000374949 UBE3BQ7Z3V4 1068 aa13.6□□□□□ -0.23
HLA-DQA1-202ENST00000374949 OGFOD1Q8N543 542 aa13.6□□□□□ -0.23
HLA-DQA1-202ENST00000374949 COA1Q9GZY4 146 aa13.6□□□□□ -0.23
HLA-DQA1-202ENST00000374949 NEURL1BA8MQ27 555 aa13.59□□□□□ -0.23
HLA-DQA1-202ENST00000374949 HDAC1Q13547 482 aaPredicted RBP13.59□□□□□ -0.23
HLA-DQA1-202ENST00000374949 PRPF38BQ5VTL8 546 aaKnown RBP13.59□□□□□ -0.23
HLA-DQA1-202ENST00000374949 KIAA0825Q8IV33 1275 aa13.59□□□□□ -0.23
HLA-DQA1-202ENST00000374949 LINS1Q8NG48 757 aa13.59□□□□□ -0.23
HLA-DQA1-202ENST00000374949 MEIS3Q99687 375 aa13.59□□□□□ -0.23
HLA-DQA1-202ENST00000374949 FZD1Q9UP38 647 aa13.59□□□□□ -0.23
HLA-DQA1-202ENST00000374949 SSC5DA1L4H1 1573 aa13.58□□□□□ -0.23
HLA-DQA1-202ENST00000374949 LAMB1P07942 1786 aa13.58□□□□□ -0.23
HLA-DQA1-202ENST00000374949 GPR25O00155 361 aa13.58□□□□□ -0.24
HLA-DQA1-202ENST00000374949 GNAI2P04899 355 aa13.58□□□□□ -0.24
HLA-DQA1-202ENST00000374949 IGHMBP2P38935 993 aaKnown RBP13.58□□□□□ -0.24
HLA-DQA1-202ENST00000374949 PTPN12Q05209 780 aaKnown RBP13.58□□□□□ -0.24
HLA-DQA1-202ENST00000374949 RPAP2Q8IXW5 612 aaPredicted RBP13.58□□□□□ -0.24
HLA-DQA1-202ENST00000374949 USP44Q9H0E7 712 aa13.58□□□□□ -0.24
HLA-DQA1-202ENST00000374949 C1orf115Q9H7X2 142 aa13.58□□□□□ -0.24
HLA-DQA1-202ENST00000374949 ZNF804BA4D1E1 1349 aa13.58□□□□□ -0.24
HLA-DQA1-202ENST00000374949 COL1A1P02452 1464 aaPredicted RBP13.57□□□□□ -0.24
HLA-DQA1-202ENST00000374949 TM4SF4P48230 202 aa13.57□□□□□ -0.24
HLA-DQA1-202ENST00000374949 SREBF2Q12772 1141 aa13.57□□□□□ -0.24
HLA-DQA1-202ENST00000374949 PKN2Q16513 984 aaKnown RBP13.57□□□□□ -0.24
HLA-DQA1-202ENST00000374949 ARMC9Q7Z3E5 817 aa13.57□□□□□ -0.24
HLA-DQA1-202ENST00000374949 APOBEC3FQ8IUX4 373 aaKnown RBP13.57□□□□□ -0.24
HLA-DQA1-202ENST00000374949 R3HDMLQ9H3Y0 253 aa13.57□□□□□ -0.24
HLA-DQA1-202ENST00000374949 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.57□□□□□ -0.24
HLA-DQA1-202ENST00000374949 HDAC5Q9UQL6 1122 aa13.57□□□□□ -0.24
HLA-DQA1-202ENST00000374949 OTOFQ9HC10 1997 aa13.56□□□□□ -0.24
HLA-DQA1-202ENST00000374949 H7C1W4 665 aa13.56□□□□□ -0.24
HLA-DQA1-202ENST00000374949 UBTFL1P0CB47 393 aaPredicted RBP13.56□□□□□ -0.24
HLA-DQA1-202ENST00000374949 ITGA6P23229 1130 aa13.56□□□□□ -0.24
HLA-DQA1-202ENST00000374949 GTF2IP78347 998 aa13.56□□□□□ -0.24
HLA-DQA1-202ENST00000374949 TTLL5Q6EMB2 1281 aa13.56□□□□□ -0.24
HLA-DQA1-202ENST00000374949 C9orf78Q9NZ63 289 aaPredicted RBP13.56□□□□□ -0.24
HLA-DQA1-202ENST00000374949 PCDH10Q9P2E7 1040 aa13.56□□□□□ -0.24
HLA-DQA1-202ENST00000374949 ANGEL1Q9UNK9 670 aaKnown RBP13.56□□□□□ -0.24
HLA-DQA1-202ENST00000374949 LEMD3Q9Y2U8 911 aa13.56□□□□□ -0.24
HLA-DQA1-202ENST00000374949 KCNJ4P48050 445 aa13.55□□□□□ -0.24
HLA-DQA1-202ENST00000374949 SPRYD7Q5W111 196 aa13.55□□□□□ -0.24
HLA-DQA1-202ENST00000374949 FBXO46Q6PJ61 603 aaPredicted RBP13.55□□□□□ -0.24
HLA-DQA1-202ENST00000374949 ANKRD44Q8N8A2 993 aa13.55□□□□□ -0.24
HLA-DQA1-202ENST00000374949 ZBED3Q96IU2 234 aaPredicted RBP13.55□□□□□ -0.24
HLA-DQA1-202ENST00000374949 ANKRD2Q9GZV1 360 aa13.55□□□□□ -0.24
HLA-DQA1-202ENST00000374949 SNAP23O00161 211 aa13.54□□□□□ -0.24
HLA-DQA1-202ENST00000374949 FKTNO75072 461 aa13.54□□□□□ -0.24
HLA-DQA1-202ENST00000374949 CHRNDQ07001 517 aa13.54□□□□□ -0.24
HLA-DQA1-202ENST00000374949 GCKRQ14397 625 aa13.54□□□□□ -0.24
HLA-DQA1-202ENST00000374949 NOM1Q5C9Z4 860 aaKnown RBP13.54□□□□□ -0.24
HLA-DQA1-202ENST00000374949 LDLRAD1Q5T700 205 aa13.54□□□□□ -0.24
HLA-DQA1-202ENST00000374949 CEP85Q6P2H3 762 aa13.54□□□□□ -0.24
HLA-DQA1-202ENST00000374949 SIRT2Q8IXJ6 389 aa13.54□□□□□ -0.24
HLA-DQA1-202ENST00000374949 CERS5Q8N5B7 392 aa13.54□□□□□ -0.24
HLA-DQA1-202ENST00000374949 CLMNQ96JQ2 1002 aa13.54□□□□□ -0.24
HLA-DQA1-202ENST00000374949 MPHOSPH8Q99549 860 aa13.54□□□□□ -0.24
HLA-DQA1-202ENST00000374949 PLA2G12BQ9BX93 195 aa13.54□□□□□ -0.24
HLA-DQA1-202ENST00000374949 PCDHAC2Q9Y5I4 1007 aa13.54□□□□□ -0.24
HLA-DQA1-202ENST00000374949 CASP7P55210 303 aa13.53□□□□□ -0.24
HLA-DQA1-202ENST00000374949 ATP8B2P98198 1209 aa13.53□□□□□ -0.24
HLA-DQA1-202ENST00000374949 DLGAP5Q15398 846 aa13.53□□□□□ -0.24
HLA-DQA1-202ENST00000374949 CFHR5Q9BXR6 569 aa13.53□□□□□ -0.24
HLA-DQA1-202ENST00000374949 DEFB129Q9H1M3 183 aa13.53□□□□□ -0.24
HLA-DQA1-202ENST00000374949 CD209Q9NNX6 404 aa13.53□□□□□ -0.24
HLA-DQA1-202ENST00000374949 UTYO14607 1347 aa13.53□□□□□ -0.24
HLA-DQA1-202ENST00000374949 AOX1Q06278 1338 aa13.53□□□□□ -0.24
HLA-DQA1-202ENST00000374949 IRS2Q9Y4H2 1338 aa13.53□□□□□ -0.24
HLA-DQA1-202ENST00000374949 ARAP2Q8WZ64 1704 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms