RNA–Protein interactions for RNA: ENST00000374945.1

LINC01993-201, Transcript of long intergenic non-protein coding RNA 1993, humanhuman

TSL 2 BASIC

Gene LINC01993, Length 2,934 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01993-201ENST00000374945 LMBR1LQ6UX01 489 aa15.16■□□□□ 0.02
LINC01993-201ENST00000374945 SYT10Q6XYQ8 523 aa15.16■□□□□ 0.02
LINC01993-201ENST00000374945 AOPEPQ8N6M6 819 aa15.16■□□□□ 0.02
LINC01993-201ENST00000374945 BOLA2Q9H3K6 86 aa15.16■□□□□ 0.02
LINC01993-201ENST00000374945 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.16■□□□□ 0.02
LINC01993-201ENST00000374945 UTYO14607 1347 aa15.16■□□□□ 0.02
LINC01993-201ENST00000374945 CCAR1Q8IX12 1150 aaKnown RBP15.16■□□□□ 0.02
LINC01993-201ENST00000374945 SYNE4Q8N205 404 aa15.16■□□□□ 0.02
LINC01993-201ENST00000374945 ENGASEQ8NFI3 743 aa15.16■□□□□ 0.02
LINC01993-201ENST00000374945 PLBD2Q8NHP8 589 aa15.16■□□□□ 0.02
LINC01993-201ENST00000374945 ACSBG1Q96GR2 724 aa15.16■□□□□ 0.02
LINC01993-201ENST00000374945 ARMCX5Q6P1M9 558 aa15.16■□□□□ 0.02
LINC01993-201ENST00000374945 PAXIP1Q6ZW49 1069 aaPredicted RBP15.16■□□□□ 0.02
LINC01993-201ENST00000374945 FTOQ9C0B1 505 aaKnown RBP eCLIP15.16■□□□□ 0.02
LINC01993-201ENST00000374945 TOGARAM1Q9Y4F4 1720 aa15.16■□□□□ 0.02
LINC01993-201ENST00000374945 GOLGB1Q14789 3259 aaKnown RBP15.15■□□□□ 0.02
LINC01993-201ENST00000374945 KCPQ6ZWJ8 1503 aa15.15■□□□□ 0.02
LINC01993-201ENST00000374945 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.15■□□□□ 0.02
LINC01993-201ENST00000374945 PSDA5PKW4 1024 aaPredicted RBP15.15■□□□□ 0.02
LINC01993-201ENST00000374945 TSGA10IPQ3SY00 556 aa15.15■□□□□ 0.02
LINC01993-201ENST00000374945 ZNF594Q96JF6 807 aaPredicted RBP15.15■□□□□ 0.02
LINC01993-201ENST00000374945 SLC4A9Q96Q91 983 aa15.15■□□□□ 0.02
LINC01993-201ENST00000374945 ZSCAN16Q9H4T2 348 aaPredicted RBP15.15■□□□□ 0.02
LINC01993-201ENST00000374945 ATG3Q9NT62 314 aa15.15■□□□□ 0.02
LINC01993-201ENST00000374945 ANO10Q9NW15 660 aa15.15■□□□□ 0.02
LINC01993-201ENST00000374945 IMPACTQ9P2X3 320 aa15.15■□□□□ 0.02
LINC01993-201ENST00000374945 CFAP45Q9UL16 551 aa15.15■□□□□ 0.02
LINC01993-201ENST00000374945 ARHGAP29Q52LW3 1261 aa15.15■□□□□ 0.02
LINC01993-201ENST00000374945 GPATCH3Q96I76 525 aa15.15■□□□□ 0.02
LINC01993-201ENST00000374945 FEZ2Q9UHY8 353 aaPredicted RBP15.15■□□□□ 0.02
LINC01993-201ENST00000374945 RCOR1Q9UKL0 485 aa15.15■□□□□ 0.02
LINC01993-201ENST00000374945 AFDNP55196 1824 aaKnown RBP15.15■□□□□ 0.02
LINC01993-201ENST00000374945 KCNJ6P48051 423 aa15.14■□□□□ 0.01
LINC01993-201ENST00000374945 CEBPZQ03701 1054 aaKnown RBP15.14■□□□□ 0.01
LINC01993-201ENST00000374945 RAD51AP2Q09MP3 1159 aa15.14■□□□□ 0.01
LINC01993-201ENST00000374945 UBXN6Q9BZV1 441 aa15.14■□□□□ 0.01
LINC01993-201ENST00000374945 HIP1O00291 1037 aa15.14■□□□□ 0.01
LINC01993-201ENST00000374945 GPTP24298 496 aa15.14■□□□□ 0.01
LINC01993-201ENST00000374945 PTPN12Q05209 780 aaKnown RBP15.14■□□□□ 0.01
LINC01993-201ENST00000374945 TFCP2Q12800 502 aa15.14■□□□□ 0.01
LINC01993-201ENST00000374945 ZNF589Q86UQ0 364 aaPredicted RBP15.14■□□□□ 0.01
LINC01993-201ENST00000374945 TRERF1Q96PN7 1200 aa15.14■□□□□ 0.01
LINC01993-201ENST00000374945 ORC3Q9UBD5 711 aaPredicted RBP15.14■□□□□ 0.01
LINC01993-201ENST00000374945 ARFGEF2Q9Y6D5 1785 aa15.14■□□□□ 0.01
LINC01993-201ENST00000374945 CEP57L1Q8IYX8 460 aa15.13■□□□□ 0.01
LINC01993-201ENST00000374945 CCDC150Q8NCX0 1101 aa15.13■□□□□ 0.01
LINC01993-201ENST00000374945 ERCC4Q92889 916 aaPredicted RBP15.13■□□□□ 0.01
LINC01993-201ENST00000374945 HMG20BQ9P0W2 317 aa15.13■□□□□ 0.01
LINC01993-201ENST00000374945 FANCGO15287 622 aa15.12■□□□□ 0.01
LINC01993-201ENST00000374945 CASP7P55210 303 aa15.12■□□□□ 0.01
LINC01993-201ENST00000374945 NEK11Q8NG66 645 aa15.12■□□□□ 0.01
LINC01993-201ENST00000374945 SMARCC2Q8TAQ2 1214 aa15.12■□□□□ 0.01
LINC01993-201ENST00000374945 FAM89AQ96GI7 184 aa15.12■□□□□ 0.01
LINC01993-201ENST00000374945 TSPYL1Q9H0U9 437 aa15.12■□□□□ 0.01
LINC01993-201ENST00000374945 COL15A1P39059 1388 aa15.12■□□□□ 0.01
LINC01993-201ENST00000374945 H3BQV1 296 aa15.12■□□□□ 0.01
LINC01993-201ENST00000374945 EXOC5O00471 708 aa15.12■□□□□ 0.01
LINC01993-201ENST00000374945 RFX5P48382 616 aaPredicted RBP15.12■□□□□ 0.01
LINC01993-201ENST00000374945 FAM160A1Q05DH4 1040 aa15.12■□□□□ 0.01
LINC01993-201ENST00000374945 MAPK8IP2Q13387 824 aaPredicted RBP15.12■□□□□ 0.01
LINC01993-201ENST00000374945 IFFO2Q5TF58 517 aa15.12■□□□□ 0.01
LINC01993-201ENST00000374945 KINO60870 393 aaKnown RBP15.11■□□□□ 0.01
LINC01993-201ENST00000374945 MUM1L1Q5H9M0 696 aa15.11■□□□□ 0.01
LINC01993-201ENST00000374945 USPL1Q5W0Q7 1092 aa15.11■□□□□ 0.01
LINC01993-201ENST00000374945 CCDC73Q6ZRK6 1079 aa15.11■□□□□ 0.01
LINC01993-201ENST00000374945 USP28Q96RU2 1077 aa15.11■□□□□ 0.01
LINC01993-201ENST00000374945 TRIM34Q9BYJ4 488 aa15.11■□□□□ 0.01
LINC01993-201ENST00000374945 PHLPP2Q6ZVD8 1323 aa15.11■□□□□ 0.01
LINC01993-201ENST00000374945 HLFQ16534 295 aa15.11■□□□□ 0.01
LINC01993-201ENST00000374945 TMC6Q7Z403 805 aa15.11■□□□□ 0.01
LINC01993-201ENST00000374945 ERC1Q8IUD2 1116 aa15.11■□□□□ 0.01
LINC01993-201ENST00000374945 XPO4Q9C0E2 1151 aaKnown RBP15.11■□□□□ 0.01
LINC01993-201ENST00000374945 CWC25Q9NXE8 425 aaPredicted RBP15.11■□□□□ 0.01
LINC01993-201ENST00000374945 DBNLQ9UJU6 430 aaKnown RBP15.11■□□□□ 0.01
LINC01993-201ENST00000374945 NEDD4P46934 1319 aa15.1■□□□□ 0.01
LINC01993-201ENST00000374945 TADA3O75528 432 aa15.1■□□□□ 0.01
LINC01993-201ENST00000374945 SCRN1Q12765 414 aa15.1■□□□□ 0.01
LINC01993-201ENST00000374945 TAF5LO75529 589 aa15.1■□□□□ 0.01
LINC01993-201ENST00000374945 SEC31AO94979 1220 aaKnown RBP15.1■□□□□ 0.01
LINC01993-201ENST00000374945 TUBB4AP04350 444 aa15.1■□□□□ 0.01
LINC01993-201ENST00000374945 FOXO4P98177 505 aa15.1■□□□□ 0.01
LINC01993-201ENST00000374945 TMCO3Q6UWJ1 677 aa15.1■□□□□ 0.01
LINC01993-201ENST00000374945 DBNDD2Q9BQY9 259 aa15.1■□□□□ 0.01
LINC01993-201ENST00000374945 ZBTB1Q9Y2K1 713 aa15.1■□□□□ 0.01
LINC01993-201ENST00000374945 LAMA4Q16363 1823 aa15.1■□□□□ 0.01
LINC01993-201ENST00000374945 KCNQ4P56696 695 aa15.1■□□□□ 0.01
LINC01993-201ENST00000374945 ETF1P62495 437 aaKnown RBP15.1■□□□□ 0.01
LINC01993-201ENST00000374945 ST5P78524 1137 aa15.1■□□□□ 0.01
LINC01993-201ENST00000374945 LRRC24Q50LG9 513 aa15.1■□□□□ 0.01
LINC01993-201ENST00000374945 NAA16Q6N069 864 aaPredicted RBP15.1■□□□□ 0.01
LINC01993-201ENST00000374945 TRIM65Q6PJ69 517 aa15.1■□□□□ 0.01
LINC01993-201ENST00000374945 Q6ZUG5 572 aa15.1■□□□□ 0.01
LINC01993-201ENST00000374945 FBXW7Q969H0 707 aa15.1■□□□□ 0.01
LINC01993-201ENST00000374945 PUS3Q9BZE2 481 aaKnown RBP15.1■□□□□ 0.01
LINC01993-201ENST00000374945 IFNKQ9P0W0 207 aa15.1■□□□□ 0.01
LINC01993-201ENST00000374945 TBC1D2BQ9UPU7 963 aa15.1■□□□□ 0.01
LINC01993-201ENST00000374945 POLR3GO15318 223 aaPredicted RBP15.09■□□□□ 0.01
LINC01993-201ENST00000374945 SASH3O75995 380 aa15.09■□□□□ 0.01
LINC01993-201ENST00000374945 TIMM10P62072 90 aa15.09■□□□□ 0.01
LINC01993-201ENST00000374945 PLCD3Q8N3E9 789 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms