RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 TRPA1O75762 1119 aa8.41□□□□□ -1.06
PMS1-202ENST00000374826 ATP2B4P23634 1241 aa8.41□□□□□ -1.06
PMS1-202ENST00000374826 NLRP12P59046 1061 aa8.41□□□□□ -1.06
PMS1-202ENST00000374826 ERICH6Q7L0X2 663 aa8.41□□□□□ -1.06
PMS1-202ENST00000374826 SLC7A3Q8WY07 619 aa8.41□□□□□ -1.06
PMS1-202ENST00000374826 EDEM1Q92611 657 aa8.41□□□□□ -1.06
PMS1-202ENST00000374826 PMEPA1Q969W9 287 aa8.41□□□□□ -1.06
PMS1-202ENST00000374826 HIF3AQ9Y2N7 669 aa8.41□□□□□ -1.06
PMS1-202ENST00000374826 KRTAP4-8A0A0G2JLE6 195 aa8.4□□□□□ -1.06
PMS1-202ENST00000374826 ARL4DP49703 201 aa8.4□□□□□ -1.06
PMS1-202ENST00000374826 FDX2Q6P4F2 183 aa8.4□□□□□ -1.06
PMS1-202ENST00000374826 SOX13Q9UN79 622 aa8.4□□□□□ -1.06
PMS1-202ENST00000374826 WDR64B1ANS9 1081 aa8.39□□□□□ -1.07
PMS1-202ENST00000374826 PPP1R15AO75807 674 aaPredicted RBP8.39□□□□□ -1.07
PMS1-202ENST00000374826 PCSK2P16519 638 aa8.39□□□□□ -1.07
PMS1-202ENST00000374826 DNM1Q05193 864 aaKnown RBP8.39□□□□□ -1.07
PMS1-202ENST00000374826 C19orf57Q0VDD7 668 aa8.39□□□□□ -1.07
PMS1-202ENST00000374826 NOM1Q5C9Z4 860 aaKnown RBP8.39□□□□□ -1.07
PMS1-202ENST00000374826 HGSNATQ68CP4 663 aa8.39□□□□□ -1.07
PMS1-202ENST00000374826 TMEM102Q8N9M5 508 aaPredicted RBP8.39□□□□□ -1.07
PMS1-202ENST00000374826 HHIPQ96QV1 700 aa8.39□□□□□ -1.07
PMS1-202ENST00000374826 SOX1O00570 391 aaPredicted RBP8.38□□□□□ -1.07
PMS1-202ENST00000374826 C8orf34Q49A92 452 aa8.38□□□□□ -1.07
PMS1-202ENST00000374826 TTC16Q8NEE8 873 aa8.38□□□□□ -1.07
PMS1-202ENST00000374826 NXPE3Q969Y0 559 aa8.38□□□□□ -1.07
PMS1-202ENST00000374826 CHRDQ9H2X0 955 aa8.38□□□□□ -1.07
PMS1-202ENST00000374826 RNF114Q9Y508 228 aa8.38□□□□□ -1.07
PMS1-202ENST00000374826 BICRAQ9NZM4 1560 aa8.37□□□□□ -1.07
PMS1-202ENST00000374826 A6NHS1 94 aa8.37□□□□□ -1.07
PMS1-202ENST00000374826 PDGFAP04085 211 aa8.37□□□□□ -1.07
PMS1-202ENST00000374826 MAP4P27816 1152 aaKnown RBP8.37□□□□□ -1.07
PMS1-202ENST00000374826 HELQQ8TDG4 1101 aa8.37□□□□□ -1.07
PMS1-202ENST00000374826 MFSD14AQ96MC6 490 aa8.37□□□□□ -1.07
PMS1-202ENST00000374826 GAS2O43903 313 aaKnown RBP8.36□□□□□ -1.07
PMS1-202ENST00000374826 YBX3P16989 372 aaKnown RBP eCLIP8.36□□□□□ -1.07
PMS1-202ENST00000374826 MZF1P28698 734 aaPredicted RBP8.36□□□□□ -1.07
PMS1-202ENST00000374826 HOXA10P31260 410 aaPredicted RBP8.36□□□□□ -1.07
PMS1-202ENST00000374826 NUTM2GQ5VZR2 741 aa8.36□□□□□ -1.07
PMS1-202ENST00000374826 VN1R5Q7Z5H4 357 aa8.36□□□□□ -1.07
PMS1-202ENST00000374826 C12orf50Q8NA57 414 aaPredicted RBP8.36□□□□□ -1.07
PMS1-202ENST00000374826 BSNDQ8WZ55 320 aa8.36□□□□□ -1.07
PMS1-202ENST00000374826 OSMRQ99650 979 aa8.36□□□□□ -1.07
PMS1-202ENST00000374826 TMPRSS13Q9BYE2 586 aa8.36□□□□□ -1.07
PMS1-202ENST00000374826 PIM2Q9P1W9 311 aa8.36□□□□□ -1.07
PMS1-202ENST00000374826 IKBKEQ14164 716 aa8.35□□□□□ -1.07
PMS1-202ENST00000374826 SGO2Q562F6 1265 aa8.35□□□□□ -1.07
PMS1-202ENST00000374826 SMG8Q8ND04 991 aaKnown RBP8.35□□□□□ -1.07
PMS1-202ENST00000374826 ATG3Q9NT62 314 aa8.35□□□□□ -1.07
PMS1-202ENST00000374826 ADGRE2Q9UHX3 823 aa8.35□□□□□ -1.07
PMS1-202ENST00000374826 EIF1AXP47813 144 aaKnown RBP8.34□□□□□ -1.07
PMS1-202ENST00000374826 GIMAP7Q8NHV1 300 aa8.34□□□□□ -1.07
PMS1-202ENST00000374826 ZKSCAN3Q9BRR0 538 aa8.34□□□□□ -1.07
PMS1-202ENST00000374826 SUGCTQ9HAC7 445 aa8.34□□□□□ -1.07
PMS1-202ENST00000374826 TMEM88BA6NKF7 163 aa8.33□□□□□ -1.08
PMS1-202ENST00000374826 EREGO14944 169 aa8.33□□□□□ -1.08
PMS1-202ENST00000374826 TIAF1O95411 115 aa8.33□□□□□ -1.08
PMS1-202ENST00000374826 F13BP05160 661 aa8.33□□□□□ -1.08
PMS1-202ENST00000374826 RXRBP28702 533 aa8.33□□□□□ -1.08
PMS1-202ENST00000374826 CYP4F12Q9HCS2 524 aa8.33□□□□□ -1.08
PMS1-202ENST00000374826 LEMD3Q9Y2U8 911 aa8.33□□□□□ -1.08
PMS1-202ENST00000374826 DLGAP3O95886 979 aa8.32□□□□□ -1.08
PMS1-202ENST00000374826 MPSTP25325 297 aa8.32□□□□□ -1.08
PMS1-202ENST00000374826 EXOSC6Q5RKV6 272 aaKnown RBP8.32□□□□□ -1.08
PMS1-202ENST00000374826 FBXL6Q8N531 539 aa8.32□□□□□ -1.08
PMS1-202ENST00000374826 GTF3C2Q8WUA4 911 aaPredicted RBP8.32□□□□□ -1.08
PMS1-202ENST00000374826 SOX17Q9H6I2 414 aaPredicted RBP8.32□□□□□ -1.08
PMS1-202ENST00000374826 TIMELESSQ9UNS1 1208 aa8.32□□□□□ -1.08
PMS1-202ENST00000374826 LOC100289279A0A1B0GTE1 492 aa8.31□□□□□ -1.08
PMS1-202ENST00000374826 SUPT5HO00267 1087 aaKnown RBP8.31□□□□□ -1.08
PMS1-202ENST00000374826 EDN3P14138 238 aa8.31□□□□□ -1.08
PMS1-202ENST00000374826 ALKBH2Q6NS38 261 aa8.31□□□□□ -1.08
PMS1-202ENST00000374826 USP26Q9BXU7 913 aa8.31□□□□□ -1.08
PMS1-202ENST00000374826 POLIQ9UNA4 740 aa8.31□□□□□ -1.08
PMS1-202ENST00000374826 FAM95CA0A1B0GW59 222 aa8.3□□□□□ -1.08
PMS1-202ENST00000374826 PHACTR2O75167 634 aa8.3□□□□□ -1.08
PMS1-202ENST00000374826 TNFRSF21O75509 655 aa8.3□□□□□ -1.08
PMS1-202ENST00000374826 DRD2P14416 443 aa8.3□□□□□ -1.08
PMS1-202ENST00000374826 FOSL1P15407 271 aa8.3□□□□□ -1.08
PMS1-202ENST00000374826 NFKBIBQ15653 356 aa8.3□□□□□ -1.08
PMS1-202ENST00000374826 SHISA5Q8N114 240 aa8.3□□□□□ -1.08
PMS1-202ENST00000374826 OSBPL1AQ9BXW6 950 aa8.3□□□□□ -1.08
PMS1-202ENST00000374826 USP11P51784 963 aa8.29□□□□□ -1.08
PMS1-202ENST00000374826 CPSF6Q16630 551 aaKnown RBP eCLIP8.29□□□□□ -1.08
PMS1-202ENST00000374826 MSMPQ1L6U9 139 aa8.29□□□□□ -1.08
PMS1-202ENST00000374826 PAOXQ6QHF9 649 aa8.29□□□□□ -1.08
PMS1-202ENST00000374826 ABI1Q8IZP0 508 aa8.29□□□□□ -1.08
PMS1-202ENST00000374826 ASAP3Q8TDY4 903 aa8.29□□□□□ -1.08
PMS1-202ENST00000374826 FBLIM1Q8WUP2 373 aa8.29□□□□□ -1.08
PMS1-202ENST00000374826 ARID3AQ99856 593 aa8.29□□□□□ -1.08
PMS1-202ENST00000374826 BHLHE41Q9C0J9 482 aaPredicted RBP8.29□□□□□ -1.08
PMS1-202ENST00000374826 ESRRAP11474 423 aaPredicted RBP8.28□□□□□ -1.08
PMS1-202ENST00000374826 NPR3P17342 541 aa8.28□□□□□ -1.08
PMS1-202ENST00000374826 CDPF1Q6NVV7 123 aa8.28□□□□□ -1.08
PMS1-202ENST00000374826 CCDC39Q9UFE4 941 aa8.28□□□□□ -1.08
PMS1-202ENST00000374826 SSFA2P28290 1259 aa8.27□□□□□ -1.09
PMS1-202ENST00000374826 GSTM4Q03013 218 aa8.27□□□□□ -1.09
PMS1-202ENST00000374826 SOX4Q06945 474 aaPredicted RBP8.27□□□□□ -1.09
PMS1-202ENST00000374826 EHHADHQ08426 723 aa8.27□□□□□ -1.09
PMS1-202ENST00000374826 AAMPQ13685 434 aa8.27□□□□□ -1.09
PMS1-202ENST00000374826 PEAR1Q5VY43 1037 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms