RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 CREB3L3Q68CJ9 461 aa18.86■□□□□ 0.61
NIPAL3-204ENST00000374399 SP8Q8IXZ3 490 aa18.86■□□□□ 0.61
NIPAL3-204ENST00000374399 SLC27A2O14975 620 aa18.86■□□□□ 0.61
NIPAL3-204ENST00000374399 OLFM4Q6UX06 510 aa18.86■□□□□ 0.61
NIPAL3-204ENST00000374399 MASTLQ96GX5 879 aa18.86■□□□□ 0.61
NIPAL3-204ENST00000374399 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.86■□□□□ 0.61
NIPAL3-204ENST00000374399 GNL3LQ9NVN8 582 aaKnown RBP18.86■□□□□ 0.61
NIPAL3-204ENST00000374399 POLLQ9UGP5 575 aa18.86■□□□□ 0.61
NIPAL3-204ENST00000374399 NSFL1CQ9UNZ2 370 aaKnown RBP18.86■□□□□ 0.61
NIPAL3-204ENST00000374399 ATP6V0A2Q9Y487 856 aa18.86■□□□□ 0.61
NIPAL3-204ENST00000374399 ZNF532Q9HCE3 1301 aa18.85■□□□□ 0.61
NIPAL3-204ENST00000374399 SLX4Q8IY92 1834 aa18.85■□□□□ 0.61
NIPAL3-204ENST00000374399 SEMA3EO15041 775 aa18.85■□□□□ 0.61
NIPAL3-204ENST00000374399 COL9A3Q14050 684 aaPredicted RBP18.85■□□□□ 0.61
NIPAL3-204ENST00000374399 PDS5AQ29RF7 1337 aaKnown RBP18.85■□□□□ 0.61
NIPAL3-204ENST00000374399 LRRFIP1Q32MZ4 808 aaKnown RBP18.85■□□□□ 0.61
NIPAL3-204ENST00000374399 ADCK5Q3MIX3 580 aa18.85■□□□□ 0.61
NIPAL3-204ENST00000374399 TMC4Q7Z404 712 aa18.85■□□□□ 0.61
NIPAL3-204ENST00000374399 C10orf71Q711Q0 1435 aa18.84■□□□□ 0.61
NIPAL3-204ENST00000374399 HSPD1P10809 573 aaKnown RBP18.84■□□□□ 0.61
NIPAL3-204ENST00000374399 WASHC4Q2M389 1173 aa18.84■□□□□ 0.61
NIPAL3-204ENST00000374399 C2CD5Q86YS7 1000 aa18.84■□□□□ 0.61
NIPAL3-204ENST00000374399 TBC1D16Q8TBP0 767 aa18.84■□□□□ 0.61
NIPAL3-204ENST00000374399 DSCC1Q9BVC3 393 aa18.84■□□□□ 0.61
NIPAL3-204ENST00000374399 DENND2AQ9ULE3 1009 aa18.84■□□□□ 0.61
NIPAL3-204ENST00000374399 ATP2B4P23634 1241 aa18.83■□□□□ 0.61
NIPAL3-204ENST00000374399 ALDH1B1P30837 517 aa18.83■□□□□ 0.61
NIPAL3-204ENST00000374399 ZSCAN25Q6NSZ9 544 aa18.83■□□□□ 0.61
NIPAL3-204ENST00000374399 VPS37DQ86XT2 251 aa18.83■□□□□ 0.61
NIPAL3-204ENST00000374399 HSCBQ8IWL3 235 aa18.83■□□□□ 0.61
NIPAL3-204ENST00000374399 SLC16A10Q8TF71 515 aa18.83■□□□□ 0.61
NIPAL3-204ENST00000374399 DLEC1Q9Y238 1755 aa18.83■□□□□ 0.6
NIPAL3-204ENST00000374399 UFL1O94874 794 aa18.83■□□□□ 0.6
NIPAL3-204ENST00000374399 CHRNA5P30532 468 aa18.83■□□□□ 0.6
NIPAL3-204ENST00000374399 NEK4P51957 841 aa18.83■□□□□ 0.6
NIPAL3-204ENST00000374399 MAGEB6Q8N7X4 407 aa18.83■□□□□ 0.6
NIPAL3-204ENST00000374399 ZNF384Q8TF68 577 aa18.83■□□□□ 0.6
NIPAL3-204ENST00000374399 UPF3BQ9BZI7 483 aaKnown RBP18.83■□□□□ 0.6
NIPAL3-204ENST00000374399 GGA1Q9UJY5 639 aa18.83■□□□□ 0.6
NIPAL3-204ENST00000374399 KIF13BQ9NQT8 1826 aa18.82■□□□□ 0.6
NIPAL3-204ENST00000374399 RPAP1Q9BWH6 1393 aaPredicted RBP18.82■□□□□ 0.6
NIPAL3-204ENST00000374399 A0A0G2JLW4 131 aa18.82■□□□□ 0.6
NIPAL3-204ENST00000374399 GPAA1O43292 621 aa18.82■□□□□ 0.6
NIPAL3-204ENST00000374399 MAP3K12Q12852 859 aa18.82■□□□□ 0.6
NIPAL3-204ENST00000374399 TSGA10IPQ3SY00 556 aa18.82■□□□□ 0.6
NIPAL3-204ENST00000374399 STYK1Q6J9G0 422 aa18.82■□□□□ 0.6
NIPAL3-204ENST00000374399 TDRD7Q8NHU6 1098 aaKnown RBP18.82■□□□□ 0.6
NIPAL3-204ENST00000374399 UPF1Q92900 1129 aaKnown RBP eCLIP18.82■□□□□ 0.6
NIPAL3-204ENST00000374399 CHD4Q14839 1912 aa18.81■□□□□ 0.6
NIPAL3-204ENST00000374399 K7ELQ4 463 aaPredicted RBP18.81■□□□□ 0.6
NIPAL3-204ENST00000374399 ADGRA1Q86SQ6 560 aa18.81■□□□□ 0.6
NIPAL3-204ENST00000374399 DAXXQ9UER7 740 aaPredicted RBP18.81■□□□□ 0.6
NIPAL3-204ENST00000374399 U3KPZ7 1027 aaPredicted RBP18.81■□□□□ 0.6
NIPAL3-204ENST00000374399 H0YIN7 160 aa18.8■□□□□ 0.6
NIPAL3-204ENST00000374399 CYP21A2P08686 494 aa18.8■□□□□ 0.6
NIPAL3-204ENST00000374399 ZNF622Q969S3 477 aaKnown RBP eCLIP18.8■□□□□ 0.6
NIPAL3-204ENST00000374399 TTC14Q96N46 770 aa18.8■□□□□ 0.6
NIPAL3-204ENST00000374399 LAMA4Q16363 1823 aa18.8■□□□□ 0.6
NIPAL3-204ENST00000374399 TM6SF1Q9BZW5 370 aa18.8■□□□□ 0.6
NIPAL3-204ENST00000374399 ZSWIM6Q9HCJ5 1215 aa18.8■□□□□ 0.6
NIPAL3-204ENST00000374399 SNED1Q8TER0 1413 aa18.79■□□□□ 0.6
NIPAL3-204ENST00000374399 CPA1P15085 419 aa18.79■□□□□ 0.6
NIPAL3-204ENST00000374399 STRBPQ96SI9 672 aaKnown RBP18.79■□□□□ 0.6
NIPAL3-204ENST00000374399 CD209Q9NNX6 404 aa18.79■□□□□ 0.6
NIPAL3-204ENST00000374399 LRP2BPQ9P2M1 347 aa18.79■□□□□ 0.6
NIPAL3-204ENST00000374399 ABCF2Q9UG63 623 aa18.79■□□□□ 0.6
NIPAL3-204ENST00000374399 KIAA1551Q9HCM1 1747 aa18.79■□□□□ 0.6
NIPAL3-204ENST00000374399 MAST2Q6P0Q8 1798 aa18.78■□□□□ 0.6
NIPAL3-204ENST00000374399 ST18O60284 1047 aa18.78■□□□□ 0.6
NIPAL3-204ENST00000374399 IL1R1P14778 569 aa18.78■□□□□ 0.6
NIPAL3-204ENST00000374399 TTLL5Q6EMB2 1281 aa18.78■□□□□ 0.6
NIPAL3-204ENST00000374399 C7orf43Q8WVR3 580 aa18.78■□□□□ 0.6
NIPAL3-204ENST00000374399 JAKMIP1Q96N16 626 aaKnown RBP18.78■□□□□ 0.6
NIPAL3-204ENST00000374399 JAG2Q9Y219 1238 aa18.78■□□□□ 0.6
NIPAL3-204ENST00000374399 STOX1Q6ZVD7 989 aa18.77■□□□□ 0.6
NIPAL3-204ENST00000374399 ZNF804AQ7Z570 1209 aa18.77■□□□□ 0.6
NIPAL3-204ENST00000374399 SPRYD3Q8NCJ5 442 aa18.77■□□□□ 0.6
NIPAL3-204ENST00000374399 CCDC88AQ3V6T2 1871 aa18.77■□□□□ 0.6
NIPAL3-204ENST00000374399 SALL1Q9NSC2 1324 aa18.77■□□□□ 0.6
NIPAL3-204ENST00000374399 FGAP02671 866 aa18.77■□□□□ 0.59
NIPAL3-204ENST00000374399 ZKSCAN1P17029 563 aaPredicted RBP18.77■□□□□ 0.59
NIPAL3-204ENST00000374399 CASTP20810 708 aaKnown RBP18.77■□□□□ 0.59
NIPAL3-204ENST00000374399 CHAF1AQ13111 956 aaPredicted RBP18.77■□□□□ 0.59
NIPAL3-204ENST00000374399 RNF20Q5VTR2 975 aa18.77■□□□□ 0.59
NIPAL3-204ENST00000374399 MPNDQ8N594 471 aa18.77■□□□□ 0.59
NIPAL3-204ENST00000374399 NSUN4Q96CB9 384 aaKnown RBP18.77■□□□□ 0.59
NIPAL3-204ENST00000374399 GOLGB1Q14789 3259 aaKnown RBP18.76■□□□□ 0.59
NIPAL3-204ENST00000374399 C6orf229H3BNL8 230 aa18.76■□□□□ 0.59
NIPAL3-204ENST00000374399 FRAT2O75474 233 aaPredicted RBP18.76■□□□□ 0.59
NIPAL3-204ENST00000374399 ZBTB7AO95365 584 aa18.76■□□□□ 0.59
NIPAL3-204ENST00000374399 KCNA3P22001 575 aa18.76■□□□□ 0.59
NIPAL3-204ENST00000374399 PRDX5P30044 214 aa18.76■□□□□ 0.59
NIPAL3-204ENST00000374399 DDIT3P35638 169 aa18.76■□□□□ 0.59
NIPAL3-204ENST00000374399 GRIK5Q16478 980 aa18.76■□□□□ 0.59
NIPAL3-204ENST00000374399 RAI14Q9P0K7 980 aa18.76■□□□□ 0.59
NIPAL3-204ENST00000374399 MBD4O95243 580 aa18.75■□□□□ 0.59
NIPAL3-204ENST00000374399 CYP7A1P22680 504 aa18.75■□□□□ 0.59
NIPAL3-204ENST00000374399 MECOMQ03112 1051 aa18.75■□□□□ 0.59
NIPAL3-204ENST00000374399 LCORLQ8N3X6 602 aa18.75■□□□□ 0.59
NIPAL3-204ENST00000374399 ARMT1Q9H993 441 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms