RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 MAST3O60307 1309 aa13.73□□□□□ -0.21
PACSIN1-202ENST00000374043 COL9A3Q14050 684 aaPredicted RBP13.73□□□□□ -0.21
PACSIN1-202ENST00000374043 SCARF1Q14162 830 aa13.73□□□□□ -0.21
PACSIN1-202ENST00000374043 ANKRD18AQ8IVF6 992 aa13.73□□□□□ -0.21
PACSIN1-202ENST00000374043 ZSCAN16Q9H4T2 348 aaPredicted RBP13.73□□□□□ -0.21
PACSIN1-202ENST00000374043 UBAP1LF5GYI3 381 aa13.72□□□□□ -0.21
PACSIN1-202ENST00000374043 XBP1P17861 261 aa13.72□□□□□ -0.21
PACSIN1-202ENST00000374043 JMYQ8N9B5 988 aa13.72□□□□□ -0.21
PACSIN1-202ENST00000374043 DDIT3P35638 169 aa13.72□□□□□ -0.21
PACSIN1-202ENST00000374043 SSRP1Q08945 709 aaKnown RBP13.72□□□□□ -0.21
PACSIN1-202ENST00000374043 FAM200AQ8TCP9 573 aa13.72□□□□□ -0.21
PACSIN1-202ENST00000374043 TTC14Q96N46 770 aa13.72□□□□□ -0.21
PACSIN1-202ENST00000374043 CDC5LQ99459 802 aaKnown RBP13.72□□□□□ -0.21
PACSIN1-202ENST00000374043 PDE8AO60658 829 aa13.72□□□□□ -0.21
PACSIN1-202ENST00000374043 SLC3A2P08195 630 aaKnown RBP13.72□□□□□ -0.21
PACSIN1-202ENST00000374043 CTSWP56202 376 aa13.72□□□□□ -0.21
PACSIN1-202ENST00000374043 DZIP1Q86YF9 867 aaKnown RBP13.72□□□□□ -0.21
PACSIN1-202ENST00000374043 ZBTB38Q8NAP3 1195 aaPredicted RBP13.72□□□□□ -0.21
PACSIN1-202ENST00000374043 TSC1Q92574 1164 aa13.72□□□□□ -0.21
PACSIN1-202ENST00000374043 TMX1Q9H3N1 280 aa13.72□□□□□ -0.21
PACSIN1-202ENST00000374043 H7C1W4 665 aa13.72□□□□□ -0.21
PACSIN1-202ENST00000374043 CCDC102BQ68D86 513 aa13.72□□□□□ -0.21
PACSIN1-202ENST00000374043 AOPEPQ8N6M6 819 aa13.72□□□□□ -0.21
PACSIN1-202ENST00000374043 USP28Q96RU2 1077 aa13.72□□□□□ -0.21
PACSIN1-202ENST00000374043 UQCRFS1P1P0C7P4 283 aa13.71□□□□□ -0.21
PACSIN1-202ENST00000374043 USP5P45974 858 aa13.71□□□□□ -0.21
PACSIN1-202ENST00000374043 CFAP100Q494V2 611 aa13.71□□□□□ -0.21
PACSIN1-202ENST00000374043 GYG1P46976 350 aa13.71□□□□□ -0.21
PACSIN1-202ENST00000374043 WTAPQ15007 396 aa13.71□□□□□ -0.21
PACSIN1-202ENST00000374043 LMTK3Q96Q04 1460 aa13.71□□□□□ -0.22
PACSIN1-202ENST00000374043 TOB2Q14106 344 aaPredicted RBP13.71□□□□□ -0.22
PACSIN1-202ENST00000374043 DHX8Q14562 1220 aaKnown RBP13.71□□□□□ -0.22
PACSIN1-202ENST00000374043 SALL3Q9BXA9 1300 aa13.71□□□□□ -0.22
PACSIN1-202ENST00000374043 CYP2E1P05181 493 aaPredicted RBP13.7□□□□□ -0.22
PACSIN1-202ENST00000374043 GIGYF2Q6Y7W6 1299 aaKnown RBP13.7□□□□□ -0.22
PACSIN1-202ENST00000374043 ANO10Q9NW15 660 aa13.7□□□□□ -0.22
PACSIN1-202ENST00000374043 RIMS1Q86UR5 1692 aaKnown RBP13.7□□□□□ -0.22
PACSIN1-202ENST00000374043 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.7□□□□□ -0.22
PACSIN1-202ENST00000374043 AIFM3Q96NN9 605 aa13.7□□□□□ -0.22
PACSIN1-202ENST00000374043 BRMS1Q9HCU9 246 aa13.7□□□□□ -0.22
PACSIN1-202ENST00000374043 ATG3Q9NT62 314 aa13.7□□□□□ -0.22
PACSIN1-202ENST00000374043 ITSN1Q15811 1721 aa13.7□□□□□ -0.22
PACSIN1-202ENST00000374043 LMOD1P29536 600 aaPredicted RBP13.7□□□□□ -0.22
PACSIN1-202ENST00000374043 AK9Q5TCS8 1911 aa13.7□□□□□ -0.22
PACSIN1-202ENST00000374043 NLRP10Q86W26 655 aa13.7□□□□□ -0.22
PACSIN1-202ENST00000374043 SDR42E1Q8WUS8 393 aa13.7□□□□□ -0.22
PACSIN1-202ENST00000374043 VAT1LQ9HCJ6 419 aa13.7□□□□□ -0.22
PACSIN1-202ENST00000374043 MAP3K15Q6ZN16 1313 aa13.69□□□□□ -0.22
PACSIN1-202ENST00000374043 GNPATO15228 680 aa13.69□□□□□ -0.22
PACSIN1-202ENST00000374043 SPTLC2O15270 562 aa13.69□□□□□ -0.22
PACSIN1-202ENST00000374043 FOXO4P98177 505 aa13.69□□□□□ -0.22
PACSIN1-202ENST00000374043 CNNM3Q8NE01 707 aa13.69□□□□□ -0.22
PACSIN1-202ENST00000374043 MKNK2Q9HBH9 465 aa13.69□□□□□ -0.22
PACSIN1-202ENST00000374043 HOOK1Q9UJC3 728 aaKnown RBP13.69□□□□□ -0.22
PACSIN1-202ENST00000374043 WWC3Q9ULE0 1092 aa13.69□□□□□ -0.22
PACSIN1-202ENST00000374043 F8W031 263 aaPredicted RBP13.69□□□□□ -0.22
PACSIN1-202ENST00000374043 PCCAP05165 728 aaPredicted RBP13.69□□□□□ -0.22
PACSIN1-202ENST00000374043 PCMTD1Q96MG8 357 aaPredicted RBP13.69□□□□□ -0.22
PACSIN1-202ENST00000374043 SETDB2Q96T68 719 aa13.69□□□□□ -0.22
PACSIN1-202ENST00000374043 CCDC87Q9NVE4 849 aa13.69□□□□□ -0.22
PACSIN1-202ENST00000374043 NOLC1Q14978 699 aaKnown RBP eCLIP13.69□□□□□ -0.22
PACSIN1-202ENST00000374043 PUM3Q15397 648 aaKnown RBP13.69□□□□□ -0.22
PACSIN1-202ENST00000374043 ZMYM1Q5SVZ6 1142 aa13.69□□□□□ -0.22
PACSIN1-202ENST00000374043 MRPS27Q92552 414 aaKnown RBP13.69□□□□□ -0.22
PACSIN1-202ENST00000374043 PRKAB2O43741 272 aa13.69□□□□□ -0.22
PACSIN1-202ENST00000374043 NAA16Q6N069 864 aaPredicted RBP13.69□□□□□ -0.22
PACSIN1-202ENST00000374043 KCNJ14Q9UNX9 436 aa13.69□□□□□ -0.22
PACSIN1-202ENST00000374043 TPM2P07951 284 aa13.68□□□□□ -0.22
PACSIN1-202ENST00000374043 PDIA3P30101 505 aaKnown RBP13.68□□□□□ -0.22
PACSIN1-202ENST00000374043 STX8Q9UNK0 236 aa13.68□□□□□ -0.22
PACSIN1-202ENST00000374043 TSPY2A6NKD2 308 aa13.68□□□□□ -0.22
PACSIN1-202ENST00000374043 C6orf229H3BNL8 230 aa13.68□□□□□ -0.22
PACSIN1-202ENST00000374043 PDE6AP16499 860 aa13.68□□□□□ -0.22
PACSIN1-202ENST00000374043 IQCA1Q86XH1 822 aa13.68□□□□□ -0.22
PACSIN1-202ENST00000374043 SPATA5Q8NB90 893 aa13.68□□□□□ -0.22
PACSIN1-202ENST00000374043 CBX8Q9HC52 389 aa13.68□□□□□ -0.22
PACSIN1-202ENST00000374043 RFC4P35249 363 aa13.68□□□□□ -0.22
PACSIN1-202ENST00000374043 SYKP43405 635 aa13.68□□□□□ -0.22
PACSIN1-202ENST00000374043 RTN1Q16799 776 aa13.68□□□□□ -0.22
PACSIN1-202ENST00000374043 STOX1Q6ZVD7 989 aa13.68□□□□□ -0.22
PACSIN1-202ENST00000374043 ATG9AQ7Z3C6 839 aa13.68□□□□□ -0.22
PACSIN1-202ENST00000374043 TMC6Q7Z403 805 aa13.68□□□□□ -0.22
PACSIN1-202ENST00000374043 NLRP3Q96P20 1036 aa13.68□□□□□ -0.22
PACSIN1-202ENST00000374043 CRKLP46109 303 aaKnown RBP13.67□□□□□ -0.22
PACSIN1-202ENST00000374043 STX1AQ16623 288 aa13.67□□□□□ -0.22
PACSIN1-202ENST00000374043 TTLL11Q8NHH1 800 aa13.67□□□□□ -0.22
PACSIN1-202ENST00000374043 CPLX3Q8WVH0 158 aa13.67□□□□□ -0.22
PACSIN1-202ENST00000374043 LOC102724428A0A0B4J2F2 783 aa13.67□□□□□ -0.22
PACSIN1-202ENST00000374043 AFMP43652 599 aa13.67□□□□□ -0.22
PACSIN1-202ENST00000374043 SIK1P57059 783 aa13.67□□□□□ -0.22
PACSIN1-202ENST00000374043 DSCC1Q9BVC3 393 aa13.67□□□□□ -0.22
PACSIN1-202ENST00000374043 PDE8BO95263 885 aa13.67□□□□□ -0.22
PACSIN1-202ENST00000374043 PDIA4P13667 645 aaKnown RBP13.67□□□□□ -0.22
PACSIN1-202ENST00000374043 ZBTB9Q96C00 473 aa13.67□□□□□ -0.22
PACSIN1-202ENST00000374043 LPIN2Q92539 896 aa13.66□□□□□ -0.22
PACSIN1-202ENST00000374043 ANGEL1Q9UNK9 670 aaKnown RBP13.66□□□□□ -0.22
PACSIN1-202ENST00000374043 MAGEB6P1A0A0J9YX57 407 aa13.66□□□□□ -0.22
PACSIN1-202ENST00000374043 KCNQ2O43526 872 aa13.66□□□□□ -0.22
PACSIN1-202ENST00000374043 MCAMP43121 646 aa13.66□□□□□ -0.22
PACSIN1-202ENST00000374043 UVSSAQ2YD98 709 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms