RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 SMIM23A6NLE4 172 aa16.27■□□□□ 0.19
TRAF1-201ENST00000373887 EYA3Q99504 573 aa16.27■□□□□ 0.19
TRAF1-201ENST00000373887 RBM8AQ9Y5S9 174 aaKnown RBP16.27■□□□□ 0.19
TRAF1-201ENST00000373887 TRPM2O94759 1503 aa16.27■□□□□ 0.19
TRAF1-201ENST00000373887 RALGAPBQ86X10 1494 aa16.26■□□□□ 0.19
TRAF1-201ENST00000373887 STXBP4Q6ZWJ1 553 aa16.26■□□□□ 0.19
TRAF1-201ENST00000373887 TBC1D5Q92609 795 aa16.26■□□□□ 0.19
TRAF1-201ENST00000373887 LGR6Q9HBX8 967 aa16.26■□□□□ 0.19
TRAF1-201ENST00000373887 A1BGP04217 495 aa16.26■□□□□ 0.19
TRAF1-201ENST00000373887 PTGS1P23219 599 aa16.26■□□□□ 0.19
TRAF1-201ENST00000373887 DPH6Q7L8W6 267 aa16.26■□□□□ 0.19
TRAF1-201ENST00000373887 ATRIPQ8WXE1 791 aa16.26■□□□□ 0.19
TRAF1-201ENST00000373887 AKR1B10O60218 316 aa16.26■□□□□ 0.19
TRAF1-201ENST00000373887 ALDH1L1O75891 902 aa16.26■□□□□ 0.19
TRAF1-201ENST00000373887 RRAGBQ5VZM2 374 aa16.26■□□□□ 0.19
TRAF1-201ENST00000373887 NDC80O14777 642 aa16.26■□□□□ 0.19
TRAF1-201ENST00000373887 TBCAO75347 108 aaKnown RBP16.26■□□□□ 0.19
TRAF1-201ENST00000373887 ZNF594Q96JF6 807 aaPredicted RBP16.26■□□□□ 0.19
TRAF1-201ENST00000373887 NSRP1Q9H0G5 558 aaKnown RBP16.26■□□□□ 0.19
TRAF1-201ENST00000373887 STX6O43752 255 aa16.26■□□□□ 0.19
TRAF1-201ENST00000373887 CFAP58Q5T655 872 aa16.26■□□□□ 0.19
TRAF1-201ENST00000373887 CARD14Q9BXL6 1004 aa16.26■□□□□ 0.19
TRAF1-201ENST00000373887 MRVI1Q9Y6F6 885 aa16.26■□□□□ 0.19
TRAF1-201ENST00000373887 ATP8B2P98198 1209 aa16.25■□□□□ 0.19
TRAF1-201ENST00000373887 GSTA5Q7RTV2 222 aa16.25■□□□□ 0.19
TRAF1-201ENST00000373887 ALG1Q9BT22 464 aa16.25■□□□□ 0.19
TRAF1-201ENST00000373887 TAF5LO75529 589 aa16.25■□□□□ 0.19
TRAF1-201ENST00000373887 ZNF165P49910 485 aa16.25■□□□□ 0.19
TRAF1-201ENST00000373887 AKNAD1Q5T1N1 836 aa16.25■□□□□ 0.19
TRAF1-201ENST00000373887 GIMAP6Q6P9H5 292 aa16.25■□□□□ 0.19
TRAF1-201ENST00000373887 CFAP65Q6ZU64 1925 aaKnown RBP16.25■□□□□ 0.19
TRAF1-201ENST00000373887 MCM6Q14566 821 aa16.25■□□□□ 0.19
TRAF1-201ENST00000373887 KLHDC4Q8TBB5 520 aa16.25■□□□□ 0.19
TRAF1-201ENST00000373887 FAM212AQ96EL1 285 aa16.25■□□□□ 0.19
TRAF1-201ENST00000373887 GOLGA6L9A6NEM1 432 aa16.25■□□□□ 0.19
TRAF1-201ENST00000373887 TPD52P55327 224 aaPredicted RBP16.25■□□□□ 0.19
TRAF1-201ENST00000373887 IFI16Q16666 785 aaKnown RBP16.25■□□□□ 0.19
TRAF1-201ENST00000373887 ITGA6P23229 1130 aa16.25■□□□□ 0.19
TRAF1-201ENST00000373887 PEG3Q9GZU2 1588 aa16.24■□□□□ 0.19
TRAF1-201ENST00000373887 PDE1AP54750 535 aa16.24■□□□□ 0.19
TRAF1-201ENST00000373887 ANKRD2Q9GZV1 360 aa16.24■□□□□ 0.19
TRAF1-201ENST00000373887 EAPPQ56P03 285 aaPredicted RBP16.24■□□□□ 0.19
TRAF1-201ENST00000373887 TBC1D2Q9BYX2 928 aa16.24■□□□□ 0.19
TRAF1-201ENST00000373887 ABCC2Q92887 1545 aa16.24■□□□□ 0.19
TRAF1-201ENST00000373887 ARID5AQ03989 594 aa16.24■□□□□ 0.19
TRAF1-201ENST00000373887 UBASH3AP57075 661 aa16.23■□□□□ 0.19
TRAF1-201ENST00000373887 TBX22Q9Y458 520 aa16.23■□□□□ 0.19
TRAF1-201ENST00000373887 ZNF790Q6PG37 636 aa16.23■□□□□ 0.19
TRAF1-201ENST00000373887 LINS1Q8NG48 757 aa16.23■□□□□ 0.19
TRAF1-201ENST00000373887 NUCB1Q02818 461 aa16.23■□□□□ 0.19
TRAF1-201ENST00000373887 ZBTB16Q05516 673 aa16.23■□□□□ 0.19
TRAF1-201ENST00000373887 G2E3Q7L622 706 aa16.23■□□□□ 0.19
TRAF1-201ENST00000373887 PHACTR2O75167 634 aa16.23■□□□□ 0.19
TRAF1-201ENST00000373887 ZFYP08048 801 aaPredicted RBP16.23■□□□□ 0.19
TRAF1-201ENST00000373887 CCDC102BQ68D86 513 aa16.23■□□□□ 0.19
TRAF1-201ENST00000373887 MICALL1Q8N3F8 863 aa16.23■□□□□ 0.19
TRAF1-201ENST00000373887 HMG20BQ9P0W2 317 aa16.23■□□□□ 0.19
TRAF1-201ENST00000373887 EEF2P13639 858 aaKnown RBP16.22■□□□□ 0.19
TRAF1-201ENST00000373887 TNNI2P48788 182 aa16.22■□□□□ 0.19
TRAF1-201ENST00000373887 CEP57Q86XR8 500 aa16.22■□□□□ 0.19
TRAF1-201ENST00000373887 EHBP1Q8NDI1 1231 aa16.22■□□□□ 0.19
TRAF1-201ENST00000373887 CAPZA3Q96KX2 299 aa16.22■□□□□ 0.19
TRAF1-201ENST00000373887 RASAL2Q9UJF2 1139 aa16.22■□□□□ 0.19
TRAF1-201ENST00000373887 PCDHB15Q9Y5E8 787 aa16.22■□□□□ 0.19
TRAF1-201ENST00000373887 H0YIN7 160 aa16.22■□□□□ 0.19
TRAF1-201ENST00000373887 MARCKSP29966 332 aaPredicted RBP16.22■□□□□ 0.19
TRAF1-201ENST00000373887 MAP7D1Q3KQU3 841 aa16.22■□□□□ 0.19
TRAF1-201ENST00000373887 LARGE2Q8N3Y3 721 aa16.22■□□□□ 0.19
TRAF1-201ENST00000373887 ANAPC4Q9UJX5 808 aa16.22■□□□□ 0.19
TRAF1-201ENST00000373887 MAP3K9P80192 1104 aa16.22■□□□□ 0.19
TRAF1-201ENST00000373887 CCDC50Q8IVM0 306 aa16.22■□□□□ 0.19
TRAF1-201ENST00000373887 CNNM2Q9H8M5 875 aa16.22■□□□□ 0.19
TRAF1-201ENST00000373887 ATP10AO60312 1499 aa16.22■□□□□ 0.19
TRAF1-201ENST00000373887 CTAGE15A4D2H0 777 aa16.22■□□□□ 0.19
TRAF1-201ENST00000373887 CTAGE8P0CG41 777 aa16.22■□□□□ 0.19
TRAF1-201ENST00000373887 CTAGE6Q86UF2 777 aa16.22■□□□□ 0.19
TRAF1-201ENST00000373887 CTAGE4Q8IX94 777 aa16.22■□□□□ 0.19
TRAF1-201ENST00000373887 SPAG5Q96R06 1193 aa16.22■□□□□ 0.19
TRAF1-201ENST00000373887 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.22■□□□□ 0.19
TRAF1-201ENST00000373887 DNAI1Q9UI46 699 aa16.22■□□□□ 0.19
TRAF1-201ENST00000373887 V9GYY5 206 aaPredicted RBP16.22■□□□□ 0.19
TRAF1-201ENST00000373887 RNF113AO15541 343 aaKnown RBP16.21■□□□□ 0.19
TRAF1-201ENST00000373887 SMC6Q96SB8 1091 aa16.21■□□□□ 0.19
TRAF1-201ENST00000373887 TIMM10P62072 90 aa16.21■□□□□ 0.19
TRAF1-201ENST00000373887 ZSCAN23Q3MJ62 389 aa16.21■□□□□ 0.19
TRAF1-201ENST00000373887 ZNF526Q8TF50 670 aaPredicted RBP16.21■□□□□ 0.19
TRAF1-201ENST00000373887 PLIN2Q99541 437 aa16.21■□□□□ 0.19
TRAF1-201ENST00000373887 GPCPD1Q9NPB8 672 aa16.21■□□□□ 0.19
TRAF1-201ENST00000373887 PAXBP1Q9Y5B6 917 aa16.21■□□□□ 0.19
TRAF1-201ENST00000373887 STAT6P42226 847 aa16.21■□□□□ 0.19
TRAF1-201ENST00000373887 TCP10Q12799 353 aa16.21■□□□□ 0.19
TRAF1-201ENST00000373887 DNAJC21Q5F1R6 531 aaKnown RBP16.21■□□□□ 0.19
TRAF1-201ENST00000373887 BMP2KLQ5H9B9 411 aa16.21■□□□□ 0.18
TRAF1-201ENST00000373887 FAM182BQ5T319 152 aa16.21■□□□□ 0.18
TRAF1-201ENST00000373887 SELENOOQ9BVL4 669 aa16.21■□□□□ 0.18
TRAF1-201ENST00000373887 TEX11Q8IYF3 940 aa16.2■□□□□ 0.18
TRAF1-201ENST00000373887 WDR62O43379 1518 aa16.2■□□□□ 0.18
TRAF1-201ENST00000373887 MBD4O95243 580 aa16.2■□□□□ 0.18
TRAF1-201ENST00000373887 ANO6Q4KMQ2 910 aa16.2■□□□□ 0.18
TRAF1-201ENST00000373887 DPP8Q6V1X1 898 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms