RNA–Protein interactions for RNA: ENST00000373482.6

PBX3-202, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 1,130 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-202ENST00000373482 ZBTB12Q9Y330 459 aaPredicted RBP22.52■■□□□ 1.2
PBX3-202ENST00000373482 NEFLP07196 543 aa22.51■■□□□ 1.19
PBX3-202ENST00000373482 PHKA1P46020 1223 aa22.51■■□□□ 1.19
PBX3-202ENST00000373482 SCNN1DP51172 638 aa22.51■■□□□ 1.19
PBX3-202ENST00000373482 DACT2Q5SW24 774 aa22.51■■□□□ 1.19
PBX3-202ENST00000373482 GPRC5DQ9NZD1 345 aa22.51■■□□□ 1.19
PBX3-202ENST00000373482 FAM205AQ6ZU69 1335 aa22.51■■□□□ 1.19
PBX3-202ENST00000373482 SEMA3EO15041 775 aa22.5■■□□□ 1.19
PBX3-202ENST00000373482 CCDC158Q5M9N0 1113 aa22.5■■□□□ 1.19
PBX3-202ENST00000373482 AACSQ86V21 672 aa22.5■■□□□ 1.19
PBX3-202ENST00000373482 C16orf71Q8IYS4 520 aaPredicted RBP22.5■■□□□ 1.19
PBX3-202ENST00000373482 EAF2Q96CJ1 260 aaPredicted RBP22.5■■□□□ 1.19
PBX3-202ENST00000373482 GCC1Q96CN9 775 aa22.5■■□□□ 1.19
PBX3-202ENST00000373482 MYH2Q9UKX2 1941 aa22.5■■□□□ 1.19
PBX3-202ENST00000373482 POTECB2RU33 542 aa22.49■■□□□ 1.19
PBX3-202ENST00000373482 H7C1D1 291 aa22.49■■□□□ 1.19
PBX3-202ENST00000373482 FKBP1AP62942 108 aaKnown RBP22.49■■□□□ 1.19
PBX3-202ENST00000373482 CHAF1AQ13111 956 aaPredicted RBP22.49■■□□□ 1.19
PBX3-202ENST00000373482 TBC1D22AQ8WUA7 517 aa22.49■■□□□ 1.19
PBX3-202ENST00000373482 DBNDD2Q9BQY9 259 aa22.49■■□□□ 1.19
PBX3-202ENST00000373482 CCDC8Q9H0W5 538 aaPredicted RBP22.49■■□□□ 1.19
PBX3-202ENST00000373482 BCL11AQ9H165 835 aa22.49■■□□□ 1.19
PBX3-202ENST00000373482 ZBTB47Q9UFB7 747 aaPredicted RBP22.49■■□□□ 1.19
PBX3-202ENST00000373482 CNOT7Q9UIV1 285 aaKnown RBP22.49■■□□□ 1.19
PBX3-202ENST00000373482 DENND2AQ9ULE3 1009 aa22.49■■□□□ 1.19
PBX3-202ENST00000373482 IFIT2P09913 472 aaKnown RBP22.48■■□□□ 1.19
PBX3-202ENST00000373482 UQCRFS1P1P0C7P4 283 aa22.48■■□□□ 1.19
PBX3-202ENST00000373482 TTC39AQ5SRH9 613 aa22.48■■□□□ 1.19
PBX3-202ENST00000373482 MICALL2Q8IY33 904 aa22.48■■□□□ 1.19
PBX3-202ENST00000373482 JAG2Q9Y219 1238 aa22.48■■□□□ 1.19
PBX3-202ENST00000373482 ZBTB22O15209 634 aa22.47■■□□□ 1.19
PBX3-202ENST00000373482 EPHX2P34913 555 aa22.47■■□□□ 1.19
PBX3-202ENST00000373482 EPS15P42566 896 aa22.47■■□□□ 1.19
PBX3-202ENST00000373482 MFSD14BQ5SR56 506 aa22.47■■□□□ 1.19
PBX3-202ENST00000373482 TAF1DQ9H5J8 278 aaPredicted RBP22.47■■□□□ 1.19
PBX3-202ENST00000373482 DBNLQ9UJU6 430 aaKnown RBP22.47■■□□□ 1.19
PBX3-202ENST00000373482 MYH7P12883 1935 aa22.47■■□□□ 1.19
PBX3-202ENST00000373482 ARID4AP29374 1257 aaPredicted RBP22.46■■□□□ 1.19
PBX3-202ENST00000373482 MMP14P50281 582 aa22.46■■□□□ 1.19
PBX3-202ENST00000373482 PNMA8AQ86V59 439 aaPredicted RBP22.46■■□□□ 1.19
PBX3-202ENST00000373482 OGFOD1Q8N543 542 aa22.46■■□□□ 1.19
PBX3-202ENST00000373482 WDR66Q8TBY9 1149 aa22.46■■□□□ 1.19
PBX3-202ENST00000373482 GMLQ99445 158 aa22.46■■□□□ 1.19
PBX3-202ENST00000373482 MXD3Q9BW11 206 aa22.46■■□□□ 1.19
PBX3-202ENST00000373482 ADARB2Q9NS39 739 aaKnown RBP22.46■■□□□ 1.19
PBX3-202ENST00000373482 HDAC9Q9UKV0 1011 aa22.46■■□□□ 1.19
PBX3-202ENST00000373482 ADAMTSL1Q8N6G6 1762 aa22.45■■□□□ 1.19
PBX3-202ENST00000373482 KIF3CO14782 793 aa22.45■■□□□ 1.18
PBX3-202ENST00000373482 SMARCA5O60264 1052 aaPredicted RBP22.45■■□□□ 1.18
PBX3-202ENST00000373482 USP17L8P0C7I0 530 aa22.45■■□□□ 1.18
PBX3-202ENST00000373482 DOCK2Q92608 1830 aa22.45■■□□□ 1.18
PBX3-202ENST00000373482 COL1A1P02452 1464 aaPredicted RBP22.44■■□□□ 1.18
PBX3-202ENST00000373482 PDS5AQ29RF7 1337 aaKnown RBP22.44■■□□□ 1.18
PBX3-202ENST00000373482 KIAA0825Q8IV33 1275 aa22.44■■□□□ 1.18
PBX3-202ENST00000373482 TLR7Q9NYK1 1049 aaKnown RBP22.44■■□□□ 1.18
PBX3-202ENST00000373482 MAST2Q6P0Q8 1798 aa22.43■■□□□ 1.18
PBX3-202ENST00000373482 RASGRF1Q13972 1273 aa22.43■■□□□ 1.18
PBX3-202ENST00000373482 EAPPQ56P03 285 aaPredicted RBP22.43■■□□□ 1.18
PBX3-202ENST00000373482 USP50Q70EL3 339 aaPredicted RBP22.43■■□□□ 1.18
PBX3-202ENST00000373482 ZGPATQ8N5A5 531 aaKnown RBP22.43■■□□□ 1.18
PBX3-202ENST00000373482 CERS5Q8N5B7 392 aa22.43■■□□□ 1.18
PBX3-202ENST00000373482 F8W031 263 aaPredicted RBP22.42■■□□□ 1.18
PBX3-202ENST00000373482 ZNF512BQ96KM6 892 aaPredicted RBP22.42■■□□□ 1.18
PBX3-202ENST00000373482 SALL1Q9NSC2 1324 aa22.41■■□□□ 1.18
PBX3-202ENST00000373482 SHTN1A0MZ66 631 aa22.41■■□□□ 1.18
PBX3-202ENST00000373482 IGHDP01880 384 aa22.41■■□□□ 1.18
PBX3-202ENST00000373482 MCAMP43121 646 aa22.41■■□□□ 1.18
PBX3-202ENST00000373482 ZNF280AP59817 542 aaPredicted RBP22.41■■□□□ 1.18
PBX3-202ENST00000373482 ANKRD45Q5TZF3 282 aa22.41■■□□□ 1.18
PBX3-202ENST00000373482 SPATA5Q8NB90 893 aa22.41■■□□□ 1.18
PBX3-202ENST00000373482 HMG20BQ9P0W2 317 aa22.41■■□□□ 1.18
PBX3-202ENST00000373482 SUGT1Q9Y2Z0 365 aa22.41■■□□□ 1.18
PBX3-202ENST00000373482 AK9Q5TCS8 1911 aa22.41■■□□□ 1.18
PBX3-202ENST00000373482 TRPM7Q96QT4 1865 aa22.41■■□□□ 1.18
PBX3-202ENST00000373482 MAST3O60307 1309 aa22.4■■□□□ 1.18
PBX3-202ENST00000373482 TOMM70O94826 608 aa22.4■■□□□ 1.18
PBX3-202ENST00000373482 KIF4BQ2VIQ3 1234 aa22.4■■□□□ 1.18
PBX3-202ENST00000373482 TBC1D10BQ4KMP7 808 aaPredicted RBP22.4■■□□□ 1.18
PBX3-202ENST00000373482 RBM26Q5T8P6 1007 aaKnown RBP22.4■■□□□ 1.18
PBX3-202ENST00000373482 SAMD7Q7Z3H4 446 aa22.4■■□□□ 1.18
PBX3-202ENST00000373482 SMC5Q8IY18 1101 aa22.4■■□□□ 1.18
PBX3-202ENST00000373482 MYOZ2Q9NPC6 264 aa22.4■■□□□ 1.18
PBX3-202ENST00000373482 TTF2Q9UNY4 1162 aaKnown RBP22.4■■□□□ 1.18
PBX3-202ENST00000373482 CLEC11AQ9Y240 323 aa22.4■■□□□ 1.18
PBX3-202ENST00000373482 SPTY2D1Q68D10 685 aaPredicted RBP22.39■■□□□ 1.17
PBX3-202ENST00000373482 LDHDQ86WU2 507 aa22.39■■□□□ 1.17
PBX3-202ENST00000373482 GPATCH3Q96I76 525 aa22.39■■□□□ 1.17
PBX3-202ENST00000373482 LDHBP07195 334 aaKnown RBP22.38■■□□□ 1.17
PBX3-202ENST00000373482 SCARF1Q14162 830 aa22.38■■□□□ 1.17
PBX3-202ENST00000373482 TRPM4Q8TD43 1214 aa22.38■■□□□ 1.17
PBX3-202ENST00000373482 ABCF2Q9UG63 623 aa22.38■■□□□ 1.17
PBX3-202ENST00000373482 RBM46Q8TBY0 533 aaKnown RBP22.37■■□□□ 1.17
PBX3-202ENST00000373482 SNRKQ9NRH2 765 aa22.37■■□□□ 1.17
PBX3-202ENST00000373482 RBM5P52756 815 aaKnown RBP eCLIP22.36■■□□□ 1.17
PBX3-202ENST00000373482 DLGAP5Q15398 846 aa22.36■■□□□ 1.17
PBX3-202ENST00000373482 B4GALNT3Q6L9W6 998 aa22.36■■□□□ 1.17
PBX3-202ENST00000373482 PI16Q6UXB8 463 aa22.36■■□□□ 1.17
PBX3-202ENST00000373482 ERICH6Q7L0X2 663 aa22.36■■□□□ 1.17
PBX3-202ENST00000373482 SMC1BQ8NDV3 1235 aa22.36■■□□□ 1.17
PBX3-202ENST00000373482 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms