RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 GADD45BO75293 160 aaPredicted RBP9.52□□□□□ -0.89
GARNL3-201ENST00000373386 OATP04181 439 aa9.52□□□□□ -0.89
GARNL3-201ENST00000373386 EIF2S2P20042 333 aaKnown RBP9.52□□□□□ -0.89
GARNL3-201ENST00000373386 RASA3Q14644 834 aa9.52□□□□□ -0.89
GARNL3-201ENST00000373386 PDIA6Q15084 440 aa9.52□□□□□ -0.89
GARNL3-201ENST00000373386 LARP1Q6PKG0 1096 aaKnown RBP9.52□□□□□ -0.89
GARNL3-201ENST00000373386 C10orf67Q8IYJ2 551 aa9.52□□□□□ -0.89
GARNL3-201ENST00000373386 KDM6AO15550 1401 aaPredicted RBP9.52□□□□□ -0.89
GARNL3-201ENST00000373386 SPEF2Q9C093 1822 aa9.52□□□□□ -0.89
GARNL3-201ENST00000373386 HMGB1P1B2RPK0 211 aaPredicted RBP9.52□□□□□ -0.89
GARNL3-201ENST00000373386 PEX19P40855 299 aa9.52□□□□□ -0.89
GARNL3-201ENST00000373386 PIBF1Q8WXW3 757 aa9.52□□□□□ -0.89
GARNL3-201ENST00000373386 TACO1Q9BSH4 297 aaKnown RBP9.52□□□□□ -0.89
GARNL3-201ENST00000373386 C9orf78Q9NZ63 289 aaPredicted RBP9.52□□□□□ -0.89
GARNL3-201ENST00000373386 PCDHGA4Q9Y5G9 962 aa9.52□□□□□ -0.89
GARNL3-201ENST00000373386 CCDC171Q6TFL3 1326 aa9.52□□□□□ -0.89
GARNL3-201ENST00000373386 CPDO75976 1380 aa9.51□□□□□ -0.89
GARNL3-201ENST00000373386 ZSCAN22P10073 491 aaPredicted RBP9.51□□□□□ -0.89
GARNL3-201ENST00000373386 UBE2HP62256 183 aa9.51□□□□□ -0.89
GARNL3-201ENST00000373386 NECTIN1Q15223 517 aa9.51□□□□□ -0.89
GARNL3-201ENST00000373386 KRT222Q8N1A0 295 aa9.51□□□□□ -0.89
GARNL3-201ENST00000373386 IL25Q9H293 177 aa9.51□□□□□ -0.89
GARNL3-201ENST00000373386 DIAPH3Q9NSV4 1193 aa9.51□□□□□ -0.89
GARNL3-201ENST00000373386 TBC1D2BQ9UPU7 963 aa9.51□□□□□ -0.89
GARNL3-201ENST00000373386 MORC2Q9Y6X9 1032 aaPredicted RBP9.51□□□□□ -0.89
GARNL3-201ENST00000373386 KCNQ3O43525 872 aa9.51□□□□□ -0.89
GARNL3-201ENST00000373386 CYP2C19P33261 490 aa9.51□□□□□ -0.89
GARNL3-201ENST00000373386 IFT88Q13099 833 aa9.51□□□□□ -0.89
GARNL3-201ENST00000373386 MPRIPQ6WCQ1 1025 aa9.51□□□□□ -0.89
GARNL3-201ENST00000373386 FMNL2Q96PY5 1086 aa9.51□□□□□ -0.89
GARNL3-201ENST00000373386 CEP89Q96ST8 783 aa9.51□□□□□ -0.89
GARNL3-201ENST00000373386 UBA5Q9GZZ9 404 aa9.51□□□□□ -0.89
GARNL3-201ENST00000373386 SLC52A2Q9HAB3 445 aa9.51□□□□□ -0.89
GARNL3-201ENST00000373386 GDPD2Q9HCC8 539 aa9.51□□□□□ -0.89
GARNL3-201ENST00000373386 HMG20BQ9P0W2 317 aa9.51□□□□□ -0.89
GARNL3-201ENST00000373386 AFDNP55196 1824 aaKnown RBP9.51□□□□□ -0.89
GARNL3-201ENST00000373386 MED23Q9ULK4 1368 aa9.51□□□□□ -0.89
GARNL3-201ENST00000373386 IFIT2P09913 472 aaKnown RBP9.51□□□□□ -0.89
GARNL3-201ENST00000373386 RWDD2BP57060 319 aa9.51□□□□□ -0.89
GARNL3-201ENST00000373386 PSMD2Q13200 908 aa9.51□□□□□ -0.89
GARNL3-201ENST00000373386 ANKRD1Q15327 319 aa9.51□□□□□ -0.89
GARNL3-201ENST00000373386 PDCD2Q16342 344 aaPredicted RBP9.51□□□□□ -0.89
GARNL3-201ENST00000373386 MAP4K1Q92918 833 aa9.51□□□□□ -0.89
GARNL3-201ENST00000373386 C19orf44Q9H6X5 657 aa9.51□□□□□ -0.89
GARNL3-201ENST00000373386 DDX41Q9UJV9 622 aaKnown RBP9.51□□□□□ -0.89
GARNL3-201ENST00000373386 NUP188Q5SRE5 1749 aa9.51□□□□□ -0.89
GARNL3-201ENST00000373386 NPHP3Q7Z494 1330 aa9.5□□□□□ -0.89
GARNL3-201ENST00000373386 RBM47A0AV96 593 aaKnown RBP9.5□□□□□ -0.89
GARNL3-201ENST00000373386 PSMA5P28066 241 aa9.5□□□□□ -0.89
GARNL3-201ENST00000373386 FLT3P36888 993 aa9.5□□□□□ -0.89
GARNL3-201ENST00000373386 PSMC1P62191 440 aaKnown RBP9.5□□□□□ -0.89
GARNL3-201ENST00000373386 MAMSTRQ6ZN01 415 aa9.5□□□□□ -0.89
GARNL3-201ENST00000373386 LRRC59Q96AG4 307 aaKnown RBP9.5□□□□□ -0.89
GARNL3-201ENST00000373386 SPG7Q9UQ90 795 aa9.5□□□□□ -0.89
GARNL3-201ENST00000373386 STX6O43752 255 aa9.5□□□□□ -0.89
GARNL3-201ENST00000373386 AK2P54819 239 aa9.5□□□□□ -0.89
GARNL3-201ENST00000373386 ZNF790Q6PG37 636 aa9.5□□□□□ -0.89
GARNL3-201ENST00000373386 NFXL1Q6ZNB6 911 aa9.5□□□□□ -0.89
GARNL3-201ENST00000373386 RUFY3Q7L099 469 aa9.5□□□□□ -0.89
GARNL3-201ENST00000373386 KRT28Q7Z3Y7 464 aa9.5□□□□□ -0.89
GARNL3-201ENST00000373386 FMNL3Q8IVF7 1028 aa9.5□□□□□ -0.89
GARNL3-201ENST00000373386 KAZALD1Q96I82 304 aa9.5□□□□□ -0.89
GARNL3-201ENST00000373386 SH3GL3Q99963 347 aa9.5□□□□□ -0.89
GARNL3-201ENST00000373386 MMTAG2Q9BU76 263 aaKnown RBP9.5□□□□□ -0.89
GARNL3-201ENST00000373386 IRF2BPLQ9H1B7 796 aa9.5□□□□□ -0.89
GARNL3-201ENST00000373386 GPBP1L1Q9HC44 474 aaPredicted RBP9.5□□□□□ -0.89
GARNL3-201ENST00000373386 COPRSQ9NQ92 184 aa9.5□□□□□ -0.89
GARNL3-201ENST00000373386 MAGEC2Q9UBF1 373 aaPredicted RBP9.5□□□□□ -0.89
GARNL3-201ENST00000373386 ADCY5O95622 1261 aa9.49□□□□□ -0.89
GARNL3-201ENST00000373386 RABL6Q3YEC7 729 aaPredicted RBP9.49□□□□□ -0.89
GARNL3-201ENST00000373386 C16orf87Q6PH81 154 aa9.49□□□□□ -0.89
GARNL3-201ENST00000373386 LRP10Q7Z4F1 713 aa9.49□□□□□ -0.89
GARNL3-201ENST00000373386 RPUSD2Q8IZ73 545 aaKnown RBP9.49□□□□□ -0.89
GARNL3-201ENST00000373386 C17orf50Q8WW18 174 aa9.49□□□□□ -0.89
GARNL3-201ENST00000373386 METTL22Q9BUU2 404 aaPredicted RBP9.49□□□□□ -0.89
GARNL3-201ENST00000373386 IQCGQ9H095 443 aaKnown RBP9.49□□□□□ -0.89
GARNL3-201ENST00000373386 UTP6Q9NYH9 597 aaKnown RBP9.49□□□□□ -0.89
GARNL3-201ENST00000373386 USP25Q9UHP3 1055 aa9.49□□□□□ -0.89
GARNL3-201ENST00000373386 CNPY2Q9Y2B0 182 aa9.49□□□□□ -0.89
GARNL3-201ENST00000373386 F13A1P00488 732 aa9.49□□□□□ -0.89
GARNL3-201ENST00000373386 ZKSCAN1P17029 563 aaPredicted RBP9.49□□□□□ -0.89
GARNL3-201ENST00000373386 CCDC15Q0P6D6 951 aa9.49□□□□□ -0.89
GARNL3-201ENST00000373386 NAIF1Q69YI7 327 aaPredicted RBP9.49□□□□□ -0.89
GARNL3-201ENST00000373386 CYP46A1Q9Y6A2 500 aa9.49□□□□□ -0.89
GARNL3-201ENST00000373386 SH3BP5O60239 455 aa9.49□□□□□ -0.89
GARNL3-201ENST00000373386 PHKG2P15735 406 aa9.49□□□□□ -0.89
GARNL3-201ENST00000373386 G3BP1Q13283 466 aaKnown RBP eCLIP9.49□□□□□ -0.89
GARNL3-201ENST00000373386 RNF20Q5VTR2 975 aa9.49□□□□□ -0.89
GARNL3-201ENST00000373386 USPL1Q5W0Q7 1092 aa9.49□□□□□ -0.89
GARNL3-201ENST00000373386 RASEFQ8IZ41 740 aa9.49□□□□□ -0.89
GARNL3-201ENST00000373386 TNS3Q68CZ2 1445 aa9.48□□□□□ -0.89
GARNL3-201ENST00000373386 NEURL1BA8MQ27 555 aa9.48□□□□□ -0.89
GARNL3-201ENST00000373386 SASH1O94885 1247 aa9.48□□□□□ -0.89
GARNL3-201ENST00000373386 PHC3Q8NDX5 983 aa9.48□□□□□ -0.89
GARNL3-201ENST00000373386 SUCLG2Q96I99 432 aa9.48□□□□□ -0.89
GARNL3-201ENST00000373386 DCAF5Q96JK2 942 aa9.48□□□□□ -0.89
GARNL3-201ENST00000373386 ELP1O95163 1332 aa9.48□□□□□ -0.89
GARNL3-201ENST00000373386 HCLS1P14317 486 aaPredicted RBP9.48□□□□□ -0.89
GARNL3-201ENST00000373386 SYT1P21579 422 aa9.48□□□□□ -0.89
GARNL3-201ENST00000373386 SF3B2Q13435 895 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms