RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 CCDC150Q8NCX0 1101 aa15.89■□□□□ 0.13
USP49-201ENST00000373006 MED1Q15648 1581 aaPredicted RBP15.89■□□□□ 0.13
USP49-201ENST00000373006 PNMA6AP0CW24 399 aaPredicted RBP15.89■□□□□ 0.13
USP49-201ENST00000373006 RTEL1Q9NZ71 1219 aa15.89■□□□□ 0.13
USP49-201ENST00000373006 URI1O94763 535 aaPredicted RBP15.88■□□□□ 0.13
USP49-201ENST00000373006 ZNF202O95125 648 aa15.88■□□□□ 0.13
USP49-201ENST00000373006 UBXN4Q92575 508 aa15.88■□□□□ 0.13
USP49-201ENST00000373006 KDM3BQ7LBC6 1761 aa15.88■□□□□ 0.13
USP49-201ENST00000373006 PSDA5PKW4 1024 aaPredicted RBP15.88■□□□□ 0.13
USP49-201ENST00000373006 SEC31AO94979 1220 aaKnown RBP15.88■□□□□ 0.13
USP49-201ENST00000373006 HSPD1P10809 573 aaKnown RBP15.88■□□□□ 0.13
USP49-201ENST00000373006 PLA2G4AP47712 749 aa15.88■□□□□ 0.13
USP49-201ENST00000373006 HAND2P61296 217 aa15.88■□□□□ 0.13
USP49-201ENST00000373006 ATL3Q6DD88 541 aa15.88■□□□□ 0.13
USP49-201ENST00000373006 SALL1Q9NSC2 1324 aa15.88■□□□□ 0.13
USP49-201ENST00000373006 SPTLC2O15270 562 aa15.87■□□□□ 0.13
USP49-201ENST00000373006 MARCKSP29966 332 aaPredicted RBP15.87■□□□□ 0.13
USP49-201ENST00000373006 ZC3H6P61129 1189 aaKnown RBP15.87■□□□□ 0.13
USP49-201ENST00000373006 FANCCQ00597 558 aa15.87■□□□□ 0.13
USP49-201ENST00000373006 NCAPHQ15003 741 aa15.87■□□□□ 0.13
USP49-201ENST00000373006 METTL22Q9BUU2 404 aaPredicted RBP15.87■□□□□ 0.13
USP49-201ENST00000373006 UTP14AQ9BVJ6 771 aaKnown RBP15.87■□□□□ 0.13
USP49-201ENST00000373006 HEG1Q9ULI3 1381 aa15.87■□□□□ 0.13
USP49-201ENST00000373006 KIF13AQ9H1H9 1805 aa15.87■□□□□ 0.13
USP49-201ENST00000373006 FANCGO15287 622 aa15.87■□□□□ 0.13
USP49-201ENST00000373006 ETF1P62495 437 aaKnown RBP15.87■□□□□ 0.13
USP49-201ENST00000373006 ANKRD13DQ6ZTN6 518 aa15.87■□□□□ 0.13
USP49-201ENST00000373006 DPF2Q92785 391 aa15.87■□□□□ 0.13
USP49-201ENST00000373006 ORAI2Q96SN7 254 aa15.87■□□□□ 0.13
USP49-201ENST00000373006 NEDD4P46934 1319 aa15.87■□□□□ 0.13
USP49-201ENST00000373006 NRDCO43847 1150 aa15.87■□□□□ 0.13
USP49-201ENST00000373006 CAPN2P17655 700 aa15.87■□□□□ 0.13
USP49-201ENST00000373006 IRX3P78415 501 aaPredicted RBP15.87■□□□□ 0.13
USP49-201ENST00000373006 HSP90AA4PQ58FG1 418 aa15.87■□□□□ 0.13
USP49-201ENST00000373006 C8orf76Q96K31 380 aa15.87■□□□□ 0.13
USP49-201ENST00000373006 PAG1Q9NWQ8 432 aa15.87■□□□□ 0.13
USP49-201ENST00000373006 A0A087WZG4 1122 aa15.86■□□□□ 0.13
USP49-201ENST00000373006 MNS1Q8NEH6 495 aa15.86■□□□□ 0.13
USP49-201ENST00000373006 GCP02774 474 aa15.86■□□□□ 0.13
USP49-201ENST00000373006 TPM4P67936 248 aa15.86■□□□□ 0.13
USP49-201ENST00000373006 ZNF790Q6PG37 636 aa15.86■□□□□ 0.13
USP49-201ENST00000373006 TMCO3Q6UWJ1 677 aa15.86■□□□□ 0.13
USP49-201ENST00000373006 NEK11Q8NG66 645 aa15.86■□□□□ 0.13
USP49-201ENST00000373006 CARD6Q9BX69 1037 aa15.86■□□□□ 0.13
USP49-201ENST00000373006 A0A1W2PQ27 194 aa15.85■□□□□ 0.13
USP49-201ENST00000373006 A0A1W2PQ64 194 aa15.85■□□□□ 0.13
USP49-201ENST00000373006 A0A1W2PQD8 194 aa15.85■□□□□ 0.13
USP49-201ENST00000373006 SERPINC1P01008 464 aa15.85■□□□□ 0.13
USP49-201ENST00000373006 NLRP12P59046 1061 aa15.85■□□□□ 0.13
USP49-201ENST00000373006 LMBR1LQ6UX01 489 aa15.85■□□□□ 0.13
USP49-201ENST00000373006 ZNF274Q96GC6 653 aaPredicted RBP15.85■□□□□ 0.13
USP49-201ENST00000373006 AGXT2Q9BYV1 514 aa15.85■□□□□ 0.13
USP49-201ENST00000373006 ZCCHC17Q9NP64 241 aaKnown RBP15.85■□□□□ 0.13
USP49-201ENST00000373006 NCAPD2Q15021 1401 aa15.85■□□□□ 0.13
USP49-201ENST00000373006 SYNE3Q6ZMZ3 975 aa15.85■□□□□ 0.13
USP49-201ENST00000373006 NFATC2IPQ8NCF5 419 aa15.85■□□□□ 0.13
USP49-201ENST00000373006 ANKRD24Q8TF21 1146 aa15.85■□□□□ 0.13
USP49-201ENST00000373006 ORC3Q9UBD5 711 aaPredicted RBP15.85■□□□□ 0.13
USP49-201ENST00000373006 AXIN2Q9Y2T1 843 aa15.85■□□□□ 0.13
USP49-201ENST00000373006 KIF28PB7ZC32 967 aa15.85■□□□□ 0.13
USP49-201ENST00000373006 PFKFB1P16118 471 aa15.85■□□□□ 0.13
USP49-201ENST00000373006 HNRNPH2P55795 449 aaKnown RBP15.85■□□□□ 0.13
USP49-201ENST00000373006 UBASH3AP57075 661 aa15.85■□□□□ 0.13
USP49-201ENST00000373006 CFAP100Q494V2 611 aa15.85■□□□□ 0.13
USP49-201ENST00000373006 CYP2C19P33261 490 aa15.84■□□□□ 0.13
USP49-201ENST00000373006 MYSM1Q5VVJ2 828 aa15.84■□□□□ 0.13
USP49-201ENST00000373006 TRIM65Q6PJ69 517 aa15.84■□□□□ 0.13
USP49-201ENST00000373006 KCNG4Q8TDN1 519 aa15.84■□□□□ 0.13
USP49-201ENST00000373006 SH3TC1Q8TE82 1336 aa15.84■□□□□ 0.13
USP49-201ENST00000373006 ANKARQ7Z5J8 1434 aa15.84■□□□□ 0.13
USP49-201ENST00000373006 DSCC1Q9BVC3 393 aa15.84■□□□□ 0.13
USP49-201ENST00000373006 HSD3B7Q9H2F3 369 aa15.84■□□□□ 0.13
USP49-201ENST00000373006 TOMM22Q9NS69 142 aa15.84■□□□□ 0.13
USP49-201ENST00000373006 MARF1Q9Y4F3 1742 aaKnown RBP15.84■□□□□ 0.13
USP49-201ENST00000373006 WDHD1O75717 1129 aaPredicted RBP15.83■□□□□ 0.13
USP49-201ENST00000373006 BPIFA3Q9BQP9 254 aa15.83■□□□□ 0.13
USP49-201ENST00000373006 CALCOCO1Q9P1Z2 691 aa15.83■□□□□ 0.13
USP49-201ENST00000373006 SLIT1O75093 1534 aa15.83■□□□□ 0.12
USP49-201ENST00000373006 TMEM232C9JQI7 657 aa15.83■□□□□ 0.12
USP49-201ENST00000373006 C10orf67Q8IYJ2 551 aa15.83■□□□□ 0.12
USP49-201ENST00000373006 FBXO18Q8NFZ0 1043 aa15.83■□□□□ 0.12
USP49-201ENST00000373006 ZNF496Q96IT1 587 aaPredicted RBP15.83■□□□□ 0.12
USP49-201ENST00000373006 HELLSQ9NRZ9 838 aa15.83■□□□□ 0.12
USP49-201ENST00000373006 MAST3O60307 1309 aa15.83■□□□□ 0.12
USP49-201ENST00000373006 HSP90AB3PQ58FF7 597 aa15.83■□□□□ 0.12
USP49-201ENST00000373006 ARGLU1Q9NWB6 273 aaPredicted RBP15.83■□□□□ 0.12
USP49-201ENST00000373006 NLRP2Q9NX02 1062 aa15.83■□□□□ 0.12
USP49-201ENST00000373006 KLF18A0A0U1RQI7 1052 aa15.82■□□□□ 0.12
USP49-201ENST00000373006 M0R2C6 588 aa15.82■□□□□ 0.12
USP49-201ENST00000373006 ZRANB2O95218 330 aaKnown RBP eCLIP15.82■□□□□ 0.12
USP49-201ENST00000373006 SKIDA1Q1XH10 827 aa15.82■□□□□ 0.12
USP49-201ENST00000373006 ZMYM1Q5SVZ6 1142 aa15.82■□□□□ 0.12
USP49-201ENST00000373006 KCNH5Q8NCM2 988 aa15.82■□□□□ 0.12
USP49-201ENST00000373006 POLR3EQ9NVU0 708 aa15.82■□□□□ 0.12
USP49-201ENST00000373006 RGPD2P0DJD1 1756 aa15.82■□□□□ 0.12
USP49-201ENST00000373006 CPLX1O14810 134 aa15.82■□□□□ 0.12
USP49-201ENST00000373006 FKBP4Q02790 459 aaKnown RBP eCLIP15.82■□□□□ 0.12
USP49-201ENST00000373006 PNOCQ13519 176 aa15.82■□□□□ 0.12
USP49-201ENST00000373006 GNL2Q13823 731 aaKnown RBP15.82■□□□□ 0.12
USP49-201ENST00000373006 AXDND1Q5T1B0 1012 aaPredicted RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms