RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 PRAM1Q96QH2 718 aa12.16□□□□□ -0.46
TRERF1-203ENST00000372917 TRIM4Q9C037 500 aa12.16□□□□□ -0.46
TRERF1-203ENST00000372917 CFAP74Q9C0B2 1584 aa12.16□□□□□ -0.46
TRERF1-203ENST00000372917 WDHD1O75717 1129 aaPredicted RBP12.16□□□□□ -0.46
TRERF1-203ENST00000372917 CAPN15O75808 1086 aa12.16□□□□□ -0.46
TRERF1-203ENST00000372917 RTN3O95197 1032 aaPredicted RBP12.16□□□□□ -0.46
TRERF1-203ENST00000372917 GBP3Q9H0R5 595 aa12.16□□□□□ -0.46
TRERF1-203ENST00000372917 KAT14Q9H8E8 782 aa12.16□□□□□ -0.46
TRERF1-203ENST00000372917 IQSEC2Q5JU85 1478 aa12.16□□□□□ -0.46
TRERF1-203ENST00000372917 ZNF518AQ6AHZ1 1483 aa12.16□□□□□ -0.46
TRERF1-203ENST00000372917 CDC25CP30307 473 aa12.16□□□□□ -0.46
TRERF1-203ENST00000372917 ARMC9Q7Z3E5 817 aa12.16□□□□□ -0.46
TRERF1-203ENST00000372917 AMOTL1Q8IY63 956 aa12.16□□□□□ -0.46
TRERF1-203ENST00000372917 A0A087WWV3 80 aa12.15□□□□□ -0.46
TRERF1-203ENST00000372917 IMPDH2P12268 514 aa12.15□□□□□ -0.46
TRERF1-203ENST00000372917 GNPTABQ3T906 1256 aa12.15□□□□□ -0.46
TRERF1-203ENST00000372917 AMOTQ4VCS5 1084 aa12.15□□□□□ -0.46
TRERF1-203ENST00000372917 OTUD7AQ8TE49 926 aaPredicted RBP12.15□□□□□ -0.46
TRERF1-203ENST00000372917 PLEKHG4BQ96PX9 1271 aa12.15□□□□□ -0.46
TRERF1-203ENST00000372917 API5Q9BZZ5 524 aaKnown RBP12.15□□□□□ -0.46
TRERF1-203ENST00000372917 LRRCC1Q9C099 1032 aa12.15□□□□□ -0.46
TRERF1-203ENST00000372917 PALD1Q9ULE6 856 aa12.15□□□□□ -0.46
TRERF1-203ENST00000372917 SETD1BQ9UPS6 1966 aaKnown RBP12.15□□□□□ -0.46
TRERF1-203ENST00000372917 NDUFAB1O14561 156 aa12.15□□□□□ -0.46
TRERF1-203ENST00000372917 MYBL1P10243 752 aa12.15□□□□□ -0.46
TRERF1-203ENST00000372917 SCNN1BP51168 640 aa12.15□□□□□ -0.46
TRERF1-203ENST00000372917 CHMP4BP1P59074 171 aa12.15□□□□□ -0.46
TRERF1-203ENST00000372917 MAP3K9P80192 1104 aa12.15□□□□□ -0.46
TRERF1-203ENST00000372917 FAM173BQ6P4H8 233 aa12.15□□□□□ -0.46
TRERF1-203ENST00000372917 CCDC150Q8NCX0 1101 aa12.15□□□□□ -0.46
TRERF1-203ENST00000372917 TBC1D5Q92609 795 aa12.15□□□□□ -0.46
TRERF1-203ENST00000372917 TBC1D2BQ9UPU7 963 aa12.15□□□□□ -0.46
TRERF1-203ENST00000372917 MYOM1P52179 1685 aa12.15□□□□□ -0.46
TRERF1-203ENST00000372917 SPHKAPQ2M3C7 1700 aa12.15□□□□□ -0.46
TRERF1-203ENST00000372917 FBLN1P23142 703 aa12.15□□□□□ -0.47
TRERF1-203ENST00000372917 RCSD1Q6JBY9 416 aa12.15□□□□□ -0.47
TRERF1-203ENST00000372917 RSRC2Q7L4I2 434 aaKnown RBP12.15□□□□□ -0.47
TRERF1-203ENST00000372917 SETDB1Q15047 1291 aa12.14□□□□□ -0.47
TRERF1-203ENST00000372917 LRRC23Q53EV4 343 aaPredicted RBP12.14□□□□□ -0.47
TRERF1-203ENST00000372917 CDCA2Q69YH5 1023 aaPredicted RBP12.14□□□□□ -0.47
TRERF1-203ENST00000372917 IGSF22Q8N9C0 903 aa12.14□□□□□ -0.47
TRERF1-203ENST00000372917 FAM76AQ8TAV0 307 aa12.14□□□□□ -0.47
TRERF1-203ENST00000372917 TBC1D31Q96DN5 1066 aa12.14□□□□□ -0.47
TRERF1-203ENST00000372917 UTP14AQ9BVJ6 771 aaKnown RBP12.14□□□□□ -0.47
TRERF1-203ENST00000372917 SHROOM2Q13796 1616 aa12.14□□□□□ -0.47
TRERF1-203ENST00000372917 ZEB2O60315 1214 aa12.14□□□□□ -0.47
TRERF1-203ENST00000372917 IFIT2P09913 472 aaKnown RBP12.14□□□□□ -0.47
TRERF1-203ENST00000372917 KRT85P78386 507 aa12.14□□□□□ -0.47
TRERF1-203ENST00000372917 C11orf57Q6ZUT1 292 aaPredicted RBP12.14□□□□□ -0.47
TRERF1-203ENST00000372917 RIN2Q8WYP3 895 aaPredicted RBP12.14□□□□□ -0.47
TRERF1-203ENST00000372917 RTEL1Q9NZ71 1219 aa12.14□□□□□ -0.47
TRERF1-203ENST00000372917 L1RE1Q9UN81 338 aa12.14□□□□□ -0.47
TRERF1-203ENST00000372917 ADGRL1O94910 1474 aa12.14□□□□□ -0.47
TRERF1-203ENST00000372917 FNTAP49354 379 aa12.14□□□□□ -0.47
TRERF1-203ENST00000372917 IRAK1P51617 712 aa12.14□□□□□ -0.47
TRERF1-203ENST00000372917 FILIP1LQ4L180 1135 aa12.14□□□□□ -0.47
TRERF1-203ENST00000372917 HDGFL1Q5TGJ6 251 aa12.14□□□□□ -0.47
TRERF1-203ENST00000372917 MSL3Q8N5Y2 521 aaKnown RBP12.14□□□□□ -0.47
TRERF1-203ENST00000372917 EPAS1Q99814 870 aa12.14□□□□□ -0.47
TRERF1-203ENST00000372917 TFIP11Q9UBB9 837 aaKnown RBP12.14□□□□□ -0.47
TRERF1-203ENST00000372917 MYL1P05976 194 aa12.13□□□□□ -0.47
TRERF1-203ENST00000372917 CHMLP26374 656 aa12.13□□□□□ -0.47
TRERF1-203ENST00000372917 ARHGAP25P42331 645 aa12.13□□□□□ -0.47
TRERF1-203ENST00000372917 SLC8A3P57103 927 aa12.13□□□□□ -0.47
TRERF1-203ENST00000372917 GNGT1P63211 74 aa12.13□□□□□ -0.47
TRERF1-203ENST00000372917 CCDC178Q5BJE1 867 aa12.13□□□□□ -0.47
TRERF1-203ENST00000372917 DDX46Q7L014 1031 aaKnown RBP12.13□□□□□ -0.47
TRERF1-203ENST00000372917 TTC6Q86TZ1 520 aa12.13□□□□□ -0.47
TRERF1-203ENST00000372917 DHX58Q96C10 678 aa12.13□□□□□ -0.47
TRERF1-203ENST00000372917 FMNL2Q96PY5 1086 aa12.13□□□□□ -0.47
TRERF1-203ENST00000372917 HOMER3Q9NSC5 361 aa12.13□□□□□ -0.47
TRERF1-203ENST00000372917 DDX19AQ9NUU7 478 aaKnown RBP12.13□□□□□ -0.47
TRERF1-203ENST00000372917 RGL1Q9NZL6 768 aa12.13□□□□□ -0.47
TRERF1-203ENST00000372917 CEP152O94986 1710 aa12.13□□□□□ -0.47
TRERF1-203ENST00000372917 INF2Q27J81 1249 aa12.13□□□□□ -0.47
TRERF1-203ENST00000372917 ARMCX5Q6P1M9 558 aa12.13□□□□□ -0.47
TRERF1-203ENST00000372917 SARM1Q6SZW1 724 aa12.13□□□□□ -0.47
TRERF1-203ENST00000372917 B4GALNT4Q76KP1 1039 aa12.13□□□□□ -0.47
TRERF1-203ENST00000372917 CCDC12Q8WUD4 166 aaPredicted RBP12.13□□□□□ -0.47
TRERF1-203ENST00000372917 TRIM65Q6PJ69 517 aa12.13□□□□□ -0.47
TRERF1-203ENST00000372917 PNKPQ96T60 521 aa12.13□□□□□ -0.47
TRERF1-203ENST00000372917 MTRQ99707 1265 aa12.13□□□□□ -0.47
TRERF1-203ENST00000372917 MMADHCQ9H3L0 296 aaPredicted RBP12.13□□□□□ -0.47
TRERF1-203ENST00000372917 ATP6V0A4Q9HBG4 840 aa12.13□□□□□ -0.47
TRERF1-203ENST00000372917 KCND1Q9NSA2 647 aa12.13□□□□□ -0.47
TRERF1-203ENST00000372917 EPB41L2O43491 1005 aaKnown RBP12.12□□□□□ -0.47
TRERF1-203ENST00000372917 PARP9Q8IXQ6 854 aa12.12□□□□□ -0.47
TRERF1-203ENST00000372917 AOPEPQ8N6M6 819 aa12.12□□□□□ -0.47
TRERF1-203ENST00000372917 WDR24Q96S15 920 aa12.12□□□□□ -0.47
TRERF1-203ENST00000372917 MPHOSPH8Q99549 860 aa12.12□□□□□ -0.47
TRERF1-203ENST00000372917 SLC40A1Q9NP59 571 aa12.12□□□□□ -0.47
TRERF1-203ENST00000372917 ZSCAN9O15535 394 aaPredicted RBP12.12□□□□□ -0.47
TRERF1-203ENST00000372917 HSP90AB4PQ58FF6 505 aa12.12□□□□□ -0.47
TRERF1-203ENST00000372917 ARHGAP22Q7Z5H3 698 aa12.12□□□□□ -0.47
TRERF1-203ENST00000372917 GDAP1L1Q96MZ0 367 aa12.12□□□□□ -0.47
TRERF1-203ENST00000372917 RIPOR2Q9Y4F9 1068 aa12.12□□□□□ -0.47
TRERF1-203ENST00000372917 PPIP5K1Q6PFW1 1433 aa12.12□□□□□ -0.47
TRERF1-203ENST00000372917 FANCGO15287 622 aa12.12□□□□□ -0.47
TRERF1-203ENST00000372917 FSBPO95073 299 aa12.12□□□□□ -0.47
TRERF1-203ENST00000372917 ZBED6P86452 979 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms