RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 MGEA5O60502 916 aa15.96■□□□□ 0.15
RAPGEF1-202ENST00000372190 CIB2O75838 187 aa15.96■□□□□ 0.15
RAPGEF1-202ENST00000372190 RUFY3Q7L099 469 aa15.96■□□□□ 0.15
RAPGEF1-202ENST00000372190 MAP7D1Q3KQU3 841 aa15.96■□□□□ 0.15
RAPGEF1-202ENST00000372190 CFAP65Q6ZU64 1925 aaKnown RBP15.96■□□□□ 0.14
RAPGEF1-202ENST00000372190 ABCA8O94911 1581 aa15.95■□□□□ 0.14
RAPGEF1-202ENST00000372190 VPS18Q9P253 973 aa15.95■□□□□ 0.14
RAPGEF1-202ENST00000372190 CTNNBL1Q8WYA6 563 aaPredicted RBP15.95■□□□□ 0.14
RAPGEF1-202ENST00000372190 EFCAB6Q5THR3 1501 aa15.95■□□□□ 0.14
RAPGEF1-202ENST00000372190 KDM6BO15054 1643 aa15.95■□□□□ 0.14
RAPGEF1-202ENST00000372190 ERCC3P19447 782 aa15.95■□□□□ 0.14
RAPGEF1-202ENST00000372190 CYP7A1P22680 504 aa15.95■□□□□ 0.14
RAPGEF1-202ENST00000372190 CCDC129Q6ZRS4 1044 aa15.95■□□□□ 0.14
RAPGEF1-202ENST00000372190 TNPO1Q92973 898 aaKnown RBP15.95■□□□□ 0.14
RAPGEF1-202ENST00000372190 KAT14Q9H8E8 782 aa15.95■□□□□ 0.14
RAPGEF1-202ENST00000372190 CEP131Q9UPN4 1083 aa15.95■□□□□ 0.14
RAPGEF1-202ENST00000372190 H0YIN7 160 aa15.95■□□□□ 0.14
RAPGEF1-202ENST00000372190 MCM6Q14566 821 aa15.95■□□□□ 0.14
RAPGEF1-202ENST00000372190 FKBP15Q5T1M5 1219 aa15.95■□□□□ 0.14
RAPGEF1-202ENST00000372190 CPLX4Q7Z7G2 160 aa15.95■□□□□ 0.14
RAPGEF1-202ENST00000372190 LRRC43Q8N309 656 aa15.95■□□□□ 0.14
RAPGEF1-202ENST00000372190 ARFGAP2Q8N6H7 521 aa15.95■□□□□ 0.14
RAPGEF1-202ENST00000372190 TBC1D2Q9BYX2 928 aa15.95■□□□□ 0.14
RAPGEF1-202ENST00000372190 SAMD15Q9P1V8 674 aa15.95■□□□□ 0.14
RAPGEF1-202ENST00000372190 YEATS4O95619 227 aa15.95■□□□□ 0.14
RAPGEF1-202ENST00000372190 TRIM7Q9C029 511 aa15.95■□□□□ 0.14
RAPGEF1-202ENST00000372190 KAT6BQ8WYB5 2073 aa15.94■□□□□ 0.14
RAPGEF1-202ENST00000372190 C20orf194Q5TEA3 1177 aa15.94■□□□□ 0.14
RAPGEF1-202ENST00000372190 PSMC4P43686 418 aa15.94■□□□□ 0.14
RAPGEF1-202ENST00000372190 PDCD7Q8N8D1 485 aaKnown RBP15.94■□□□□ 0.14
RAPGEF1-202ENST00000372190 GBP5Q96PP8 586 aa15.94■□□□□ 0.14
RAPGEF1-202ENST00000372190 SSFA2P28290 1259 aa15.93■□□□□ 0.14
RAPGEF1-202ENST00000372190 EHBP1Q8NDI1 1231 aa15.93■□□□□ 0.14
RAPGEF1-202ENST00000372190 INPP5BP32019 993 aa15.93■□□□□ 0.14
RAPGEF1-202ENST00000372190 NAA16Q6N069 864 aaPredicted RBP15.93■□□□□ 0.14
RAPGEF1-202ENST00000372190 DNAI2Q9GZS0 605 aa15.93■□□□□ 0.14
RAPGEF1-202ENST00000372190 RNF8O76064 485 aa15.93■□□□□ 0.14
RAPGEF1-202ENST00000372190 IL15P40933 162 aaPredicted RBP15.93■□□□□ 0.14
RAPGEF1-202ENST00000372190 TUBB4BP68371 445 aa15.93■□□□□ 0.14
RAPGEF1-202ENST00000372190 MFSD6Q6ZSS7 791 aa15.93■□□□□ 0.14
RAPGEF1-202ENST00000372190 TRIM35Q9UPQ4 493 aa15.93■□□□□ 0.14
RAPGEF1-202ENST00000372190 ARHGEF12Q9NZN5 1544 aa15.93■□□□□ 0.14
RAPGEF1-202ENST00000372190 SKAP1Q86WV1 359 aa15.93■□□□□ 0.14
RAPGEF1-202ENST00000372190 PLEKHG1Q9ULL1 1385 aa15.93■□□□□ 0.14
RAPGEF1-202ENST00000372190 IQCGQ9H095 443 aaKnown RBP15.92■□□□□ 0.14
RAPGEF1-202ENST00000372190 GOLGA8AA7E2F4 631 aa15.92■□□□□ 0.14
RAPGEF1-202ENST00000372190 GOLGA8BA8MQT2 603 aa15.92■□□□□ 0.14
RAPGEF1-202ENST00000372190 TRIM21P19474 475 aaKnown RBP15.92■□□□□ 0.14
RAPGEF1-202ENST00000372190 PARP10Q53GL7 1025 aa15.92■□□□□ 0.14
RAPGEF1-202ENST00000372190 CCDC82Q8N4S0 544 aa15.92■□□□□ 0.14
RAPGEF1-202ENST00000372190 PRPF31Q8WWY3 499 aaKnown RBP15.92■□□□□ 0.14
RAPGEF1-202ENST00000372190 ADGBQ8N7X0 1667 aa15.92■□□□□ 0.14
RAPGEF1-202ENST00000372190 PZPP20742 1482 aa15.92■□□□□ 0.14
RAPGEF1-202ENST00000372190 TUBB4AP04350 444 aa15.92■□□□□ 0.14
RAPGEF1-202ENST00000372190 CCDC12Q8WUD4 166 aaPredicted RBP15.92■□□□□ 0.14
RAPGEF1-202ENST00000372190 VAT1LQ9HCJ6 419 aa15.92■□□□□ 0.14
RAPGEF1-202ENST00000372190 SATB2Q9UPW6 733 aa15.92■□□□□ 0.14
RAPGEF1-202ENST00000372190 GABPB1Q06547 395 aaPredicted RBP15.92■□□□□ 0.14
RAPGEF1-202ENST00000372190 C8orf58Q8NAV2 365 aa15.92■□□□□ 0.14
RAPGEF1-202ENST00000372190 TSPY3P0CV98 308 aa15.91■□□□□ 0.14
RAPGEF1-202ENST00000372190 TSPY8P0CW00 308 aa15.91■□□□□ 0.14
RAPGEF1-202ENST00000372190 SSRP1Q08945 709 aaKnown RBP15.91■□□□□ 0.14
RAPGEF1-202ENST00000372190 NEDD9Q14511 834 aa15.91■□□□□ 0.14
RAPGEF1-202ENST00000372190 UVSSAQ2YD98 709 aa15.91■□□□□ 0.14
RAPGEF1-202ENST00000372190 CCDC150Q8NCX0 1101 aa15.91■□□□□ 0.14
RAPGEF1-202ENST00000372190 CTAGE15A4D2H0 777 aa15.91■□□□□ 0.14
RAPGEF1-202ENST00000372190 CTAGE8P0CG41 777 aa15.91■□□□□ 0.14
RAPGEF1-202ENST00000372190 TNNI2P48788 182 aa15.91■□□□□ 0.14
RAPGEF1-202ENST00000372190 ZNF790Q6PG37 636 aa15.91■□□□□ 0.14
RAPGEF1-202ENST00000372190 CACNA2D4Q7Z3S7 1137 aa15.91■□□□□ 0.14
RAPGEF1-202ENST00000372190 CTAGE4Q8IX94 777 aa15.91■□□□□ 0.14
RAPGEF1-202ENST00000372190 TMEM87AQ8NBN3 555 aa15.91■□□□□ 0.14
RAPGEF1-202ENST00000372190 TMX1Q9H3N1 280 aa15.91■□□□□ 0.14
RAPGEF1-202ENST00000372190 ARHGEF5Q12774 1597 aa15.91■□□□□ 0.14
RAPGEF1-202ENST00000372190 EIF6P56537 245 aaKnown RBP15.91■□□□□ 0.14
RAPGEF1-202ENST00000372190 GPR162Q16538 588 aa15.91■□□□□ 0.14
RAPGEF1-202ENST00000372190 TRIM4Q9C037 500 aa15.91■□□□□ 0.14
RAPGEF1-202ENST00000372190 USP25Q9UHP3 1055 aa15.91■□□□□ 0.14
RAPGEF1-202ENST00000372190 BICDL2A1A5D9 508 aa15.91■□□□□ 0.14
RAPGEF1-202ENST00000372190 PHLDB2Q86SQ0 1253 aa15.91■□□□□ 0.14
RAPGEF1-202ENST00000372190 PPP1R9BQ96SB3 815 aa15.91■□□□□ 0.14
RAPGEF1-202ENST00000372190 HECW2Q9P2P5 1572 aa15.9■□□□□ 0.14
RAPGEF1-202ENST00000372190 GMNNO75496 209 aa15.9■□□□□ 0.14
RAPGEF1-202ENST00000372190 NLRP5P59047 1200 aa15.9■□□□□ 0.14
RAPGEF1-202ENST00000372190 SCAND2PQ9GZW5 306 aaPredicted RBP15.9■□□□□ 0.14
RAPGEF1-202ENST00000372190 CCDC77Q9BR77 488 aa15.9■□□□□ 0.14
RAPGEF1-202ENST00000372190 SLC52A2Q9HAB3 445 aa15.9■□□□□ 0.14
RAPGEF1-202ENST00000372190 SLC4A4Q9Y6R1 1079 aa15.9■□□□□ 0.14
RAPGEF1-202ENST00000372190 RLBP1P12271 317 aa15.9■□□□□ 0.14
RAPGEF1-202ENST00000372190 FAM76AQ8TAV0 307 aa15.9■□□□□ 0.14
RAPGEF1-202ENST00000372190 POLR3AO14802 1390 aaPredicted RBP15.9■□□□□ 0.14
RAPGEF1-202ENST00000372190 GNG11P61952 73 aa15.89■□□□□ 0.14
RAPGEF1-202ENST00000372190 CCDC40Q4G0X9 1142 aa15.89■□□□□ 0.14
RAPGEF1-202ENST00000372190 LINS1Q8NG48 757 aa15.89■□□□□ 0.14
RAPGEF1-202ENST00000372190 LRRC45Q96CN5 670 aa15.89■□□□□ 0.14
RAPGEF1-202ENST00000372190 COMMD10Q9Y6G5 202 aa15.89■□□□□ 0.14
RAPGEF1-202ENST00000372190 UFL1O94874 794 aa15.89■□□□□ 0.13
RAPGEF1-202ENST00000372190 TMEM67Q5HYA8 995 aa15.89■□□□□ 0.13
RAPGEF1-202ENST00000372190 MICAL1Q8TDZ2 1067 aa15.89■□□□□ 0.13
RAPGEF1-202ENST00000372190 DNA2P51530 1060 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms