RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 ARAP2Q8WZ64 1704 aa24.22■■□□□ 1.47
VEGFA-204ENST00000372064 PHKA1P46020 1223 aa24.22■■□□□ 1.47
VEGFA-204ENST00000372064 USP25Q9UHP3 1055 aa24.22■■□□□ 1.47
VEGFA-204ENST00000372064 CCDC192P0DO97 292 aa24.21■■□□□ 1.47
VEGFA-204ENST00000372064 PGBD1Q96JS3 809 aa24.21■■□□□ 1.47
VEGFA-204ENST00000372064 GPHNQ9NQX3 736 aaPredicted RBP24.21■■□□□ 1.47
VEGFA-204ENST00000372064 FOSBP53539 338 aa24.21■■□□□ 1.47
VEGFA-204ENST00000372064 CCDC102BQ68D86 513 aa24.21■■□□□ 1.47
VEGFA-204ENST00000372064 CFAP45Q9UL16 551 aa24.21■■□□□ 1.47
VEGFA-204ENST00000372064 THRAP3Q9Y2W1 955 aaKnown RBP24.21■■□□□ 1.47
VEGFA-204ENST00000372064 PPFIA3O75145 1194 aa24.21■■□□□ 1.47
VEGFA-204ENST00000372064 ADD1P35611 737 aaKnown RBP24.21■■□□□ 1.47
VEGFA-204ENST00000372064 ADD2P35612 726 aa24.21■■□□□ 1.47
VEGFA-204ENST00000372064 TTF1Q15361 905 aaPredicted RBP24.21■■□□□ 1.47
VEGFA-204ENST00000372064 MAP3K11Q16584 847 aa24.21■■□□□ 1.47
VEGFA-204ENST00000372064 ZSCAN25Q6NSZ9 544 aa24.21■■□□□ 1.47
VEGFA-204ENST00000372064 RBM43Q6ZSC3 357 aaKnown RBP24.21■■□□□ 1.47
VEGFA-204ENST00000372064 PIH1D3Q9NQM4 214 aaKnown RBP24.21■■□□□ 1.47
VEGFA-204ENST00000372064 DDX19AQ9NUU7 478 aaKnown RBP24.21■■□□□ 1.47
VEGFA-204ENST00000372064 RREB1Q92766 1687 aa24.21■■□□□ 1.47
VEGFA-204ENST00000372064 NRAPQ86VF7 1730 aa24.2■■□□□ 1.46
VEGFA-204ENST00000372064 LOC102724428A0A0B4J2F2 783 aa24.2■■□□□ 1.46
VEGFA-204ENST00000372064 GOLGA6L4A6NEF3 574 aa24.2■■□□□ 1.46
VEGFA-204ENST00000372064 KDM4AO75164 1064 aa24.2■■□□□ 1.46
VEGFA-204ENST00000372064 OFD1O75665 1012 aa24.2■■□□□ 1.46
VEGFA-204ENST00000372064 SIK1P57059 783 aa24.2■■□□□ 1.46
VEGFA-204ENST00000372064 SLC9C2Q5TAH2 1124 aa24.2■■□□□ 1.46
VEGFA-204ENST00000372064 MB21D2Q8IYB1 491 aaPredicted RBP24.2■■□□□ 1.46
VEGFA-204ENST00000372064 ARID4AP29374 1257 aaPredicted RBP24.2■■□□□ 1.46
VEGFA-204ENST00000372064 ITPK1Q13572 414 aa24.2■■□□□ 1.46
VEGFA-204ENST00000372064 DACT1Q9NYF0 836 aa24.2■■□□□ 1.46
VEGFA-204ENST00000372064 CICQ96RK0 1608 aaPredicted RBP24.19■■□□□ 1.46
VEGFA-204ENST00000372064 WDR19Q8NEZ3 1342 aa24.19■■□□□ 1.46
VEGFA-204ENST00000372064 NUTM2BA6NNL0 878 aaPredicted RBP24.18■■□□□ 1.46
VEGFA-204ENST00000372064 NUTM2EB1AL46 878 aaPredicted RBP24.18■■□□□ 1.46
VEGFA-204ENST00000372064 IDH1O75874 414 aaKnown RBP24.18■■□□□ 1.46
VEGFA-204ENST00000372064 ADCY5O95622 1261 aa24.18■■□□□ 1.46
VEGFA-204ENST00000372064 NUTM2AQ8IVF1 878 aaPredicted RBP24.18■■□□□ 1.46
VEGFA-204ENST00000372064 PUM3Q15397 648 aaKnown RBP24.18■■□□□ 1.46
VEGFA-204ENST00000372064 CLSTN2Q9H4D0 955 aa24.18■■□□□ 1.46
VEGFA-204ENST00000372064 MROH5Q6ZUA9 1318 aa24.18■■□□□ 1.46
VEGFA-204ENST00000372064 SNAP23O00161 211 aa24.17■■□□□ 1.46
VEGFA-204ENST00000372064 FGFR2P21802 821 aa24.17■■□□□ 1.46
VEGFA-204ENST00000372064 LPIN2Q92539 896 aa24.17■■□□□ 1.46
VEGFA-204ENST00000372064 CARMIL3Q8ND23 1372 aa24.17■■□□□ 1.46
VEGFA-204ENST00000372064 CAMTA2O94983 1202 aa24.17■■□□□ 1.46
VEGFA-204ENST00000372064 UBE3CQ15386 1083 aa24.17■■□□□ 1.46
VEGFA-204ENST00000372064 ATL3Q6DD88 541 aa24.17■■□□□ 1.46
VEGFA-204ENST00000372064 UTP14AQ9BVJ6 771 aaKnown RBP24.17■■□□□ 1.46
VEGFA-204ENST00000372064 SEC31BQ9NQW1 1179 aa24.17■■□□□ 1.46
VEGFA-204ENST00000372064 NCOA7Q8NI08 942 aa24.17■■□□□ 1.46
VEGFA-204ENST00000372064 ZNF213O14771 459 aa24.16■■□□□ 1.46
VEGFA-204ENST00000372064 PRC1O43663 620 aa24.16■■□□□ 1.46
VEGFA-204ENST00000372064 TNMDQ9H2S6 317 aa24.16■■□□□ 1.46
VEGFA-204ENST00000372064 PTMAP06454 111 aaKnown RBP24.16■■□□□ 1.46
VEGFA-204ENST00000372064 UQCRFS1P1P0C7P4 283 aa24.16■■□□□ 1.46
VEGFA-204ENST00000372064 ANTXR2P58335 489 aa24.16■■□□□ 1.46
VEGFA-204ENST00000372064 CAMK4Q16566 473 aa24.16■■□□□ 1.46
VEGFA-204ENST00000372064 RCOR1Q9UKL0 485 aa24.16■■□□□ 1.46
VEGFA-204ENST00000372064 MRVI1Q9Y6F6 885 aa24.16■■□□□ 1.46
VEGFA-204ENST00000372064 FDPSP14324 419 aaKnown RBP24.15■■□□□ 1.46
VEGFA-204ENST00000372064 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.15■■□□□ 1.46
VEGFA-204ENST00000372064 WWC3Q9ULE0 1092 aa24.15■■□□□ 1.46
VEGFA-204ENST00000372064 SPATA31A5Q5VU36 1347 aa24.15■■□□□ 1.46
VEGFA-204ENST00000372064 SPATA31A7Q8IWB4 1347 aa24.15■■□□□ 1.46
VEGFA-204ENST00000372064 NR1I2O75469 434 aa24.15■■□□□ 1.46
VEGFA-204ENST00000372064 TYRO3Q06418 890 aa24.15■■□□□ 1.46
VEGFA-204ENST00000372064 ZNF532Q9HCE3 1301 aa24.15■■□□□ 1.46
VEGFA-204ENST00000372064 PHLPP1O60346 1717 aa24.14■■□□□ 1.46
VEGFA-204ENST00000372064 PDE6AP16499 860 aa24.14■■□□□ 1.45
VEGFA-204ENST00000372064 FAM200AQ8TCP9 573 aa24.14■■□□□ 1.45
VEGFA-204ENST00000372064 BICD2Q8TD16 824 aa24.14■■□□□ 1.45
VEGFA-204ENST00000372064 MPHOSPH8Q99549 860 aa24.14■■□□□ 1.45
VEGFA-204ENST00000372064 NBPF3Q9H094 633 aa24.14■■□□□ 1.45
VEGFA-204ENST00000372064 MYO5AQ9Y4I1 1855 aaKnown RBP24.14■■□□□ 1.45
VEGFA-204ENST00000372064 HPS5Q9UPZ3 1129 aa24.14■■□□□ 1.45
VEGFA-204ENST00000372064 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.14■■□□□ 1.458e-8■■□□□ 13.9
VEGFA-204ENST00000372064 TCRBV5S4A2TA0A5A2 114 aa24.13■■□□□ 1.45
VEGFA-204ENST00000372064 RALYLQ86SE5 291 aaKnown RBP24.13■■□□□ 1.45
VEGFA-204ENST00000372064 NIP7Q9Y221 180 aaKnown RBP eCLIP24.13■■□□□ 1.45
VEGFA-204ENST00000372064 GUCY1B3Q02153 619 aa24.13■■□□□ 1.45
VEGFA-204ENST00000372064 ILDR1Q86SU0 546 aaPredicted RBP24.13■■□□□ 1.45
VEGFA-204ENST00000372064 KCNQ2O43526 872 aa24.12■■□□□ 1.45
VEGFA-204ENST00000372064 SLC5A1P13866 664 aa24.12■■□□□ 1.45
VEGFA-204ENST00000372064 CEBPZQ03701 1054 aaKnown RBP24.12■■□□□ 1.45
VEGFA-204ENST00000372064 PARP10Q53GL7 1025 aa24.12■■□□□ 1.45
VEGFA-204ENST00000372064 DENND2AQ9ULE3 1009 aa24.12■■□□□ 1.45
VEGFA-204ENST00000372064 MYH14Q7Z406 1995 aaKnown RBP24.12■■□□□ 1.45
VEGFA-204ENST00000372064 DOCK2Q92608 1830 aa24.12■■□□□ 1.45
VEGFA-204ENST00000372064 AP5Z1O43299 807 aa24.12■■□□□ 1.45
VEGFA-204ENST00000372064 ZNF396Q96N95 335 aaPredicted RBP24.12■■□□□ 1.45
VEGFA-204ENST00000372064 KLF18A0A0U1RQI7 1052 aa24.11■■□□□ 1.45
VEGFA-204ENST00000372064 DHX16O60231 1041 aaKnown RBP24.11■■□□□ 1.45
VEGFA-204ENST00000372064 LAMB2P55268 1798 aa24.11■■□□□ 1.45
VEGFA-204ENST00000372064 NTSR2O95665 410 aa24.11■■□□□ 1.45
VEGFA-204ENST00000372064 APPP05067 770 aa24.11■■□□□ 1.45
VEGFA-204ENST00000372064 RAB11FIP4Q86YS3 637 aa24.11■■□□□ 1.45
VEGFA-204ENST00000372064 FTOQ9C0B1 505 aaKnown RBP eCLIP24.11■■□□□ 1.455e-19■□□□□ 10.1
VEGFA-204ENST00000372064 RASGRF1Q13972 1273 aa24.11■■□□□ 1.45
VEGFA-204ENST00000372064 CKAP2LQ8IYA6 745 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms