RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 SENP2Q9HC62 589 aa13.82□□□□□ -0.2
PDE6C-201ENST00000371447 AFDNP55196 1824 aaKnown RBP13.82□□□□□ -0.2
PDE6C-201ENST00000371447 SIPA1L3O60292 1781 aaPredicted RBP13.81□□□□□ -0.2
PDE6C-201ENST00000371447 APPBP2Q92624 585 aa13.81□□□□□ -0.2
PDE6C-201ENST00000371447 NGLY1Q96IV0 654 aa13.81□□□□□ -0.2
PDE6C-201ENST00000371447 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.81□□□□□ -0.2
PDE6C-201ENST00000371447 CSF1RP07333 972 aa13.81□□□□□ -0.2
PDE6C-201ENST00000371447 DRC7Q8IY82 874 aa13.81□□□□□ -0.2
PDE6C-201ENST00000371447 CMTR1Q8N1G2 835 aaKnown RBP13.81□□□□□ -0.2
PDE6C-201ENST00000371447 CCDC87Q9NVE4 849 aa13.81□□□□□ -0.2
PDE6C-201ENST00000371447 LRP2BPQ9P2M1 347 aa13.81□□□□□ -0.2
PDE6C-201ENST00000371447 TUBGCP6Q96RT7 1819 aa13.8□□□□□ -0.2
PDE6C-201ENST00000371447 UBE2Q2LH0YL09 131 aa13.8□□□□□ -0.2
PDE6C-201ENST00000371447 ATP2B1P20020 1258 aa13.8□□□□□ -0.2
PDE6C-201ENST00000371447 ADD1P35611 737 aaKnown RBP13.8□□□□□ -0.2
PDE6C-201ENST00000371447 SF3A1Q15459 793 aaKnown RBP13.8□□□□□ -0.2
PDE6C-201ENST00000371447 PHKBQ93100 1093 aa13.8□□□□□ -0.2
PDE6C-201ENST00000371447 PGBD1Q96JS3 809 aa13.8□□□□□ -0.2
PDE6C-201ENST00000371447 GPR108Q9NPR9 543 aa13.8□□□□□ -0.2
PDE6C-201ENST00000371447 KCPQ6ZWJ8 1503 aa13.8□□□□□ -0.2
PDE6C-201ENST00000371447 UTP14AQ9BVJ6 771 aaKnown RBP13.8□□□□□ -0.2
PDE6C-201ENST00000371447 FOXP2O15409 715 aa13.8□□□□□ -0.2
PDE6C-201ENST00000371447 MBD4O95243 580 aa13.8□□□□□ -0.2
PDE6C-201ENST00000371447 MAP3K11Q16584 847 aa13.8□□□□□ -0.2
PDE6C-201ENST00000371447 USP28Q96RU2 1077 aa13.8□□□□□ -0.2
PDE6C-201ENST00000371447 ORC3Q9UBD5 711 aaPredicted RBP13.8□□□□□ -0.2
PDE6C-201ENST00000371447 MINDY4BA8MYZ0 360 aa13.79□□□□□ -0.2
PDE6C-201ENST00000371447 HMGB1P09429 215 aaKnown RBP13.79□□□□□ -0.2
PDE6C-201ENST00000371447 GYG1P46976 350 aa13.79□□□□□ -0.2
PDE6C-201ENST00000371447 GNL2Q13823 731 aaKnown RBP13.79□□□□□ -0.2
PDE6C-201ENST00000371447 ISM2Q6H9L7 571 aa13.79□□□□□ -0.2
PDE6C-201ENST00000371447 SCAND2PQ9GZW5 306 aaPredicted RBP13.79□□□□□ -0.2
PDE6C-201ENST00000371447 CTNNA3Q9UI47 895 aa13.79□□□□□ -0.2
PDE6C-201ENST00000371447 SMIM22K7EJ46 135 aa13.79□□□□□ -0.2
PDE6C-201ENST00000371447 PDE6AP16499 860 aa13.79□□□□□ -0.2
PDE6C-201ENST00000371447 RASGRF1Q13972 1273 aa13.79□□□□□ -0.2
PDE6C-201ENST00000371447 LRRFIP1Q32MZ4 808 aaKnown RBP13.79□□□□□ -0.2
PDE6C-201ENST00000371447 TSGA10IPQ3SY00 556 aa13.79□□□□□ -0.2
PDE6C-201ENST00000371447 VPS37DQ86XT2 251 aa13.79□□□□□ -0.2
PDE6C-201ENST00000371447 MRC1P22897 1456 aa13.79□□□□□ -0.2
PDE6C-201ENST00000371447 PFKFB2O60825 505 aa13.79□□□□□ -0.2
PDE6C-201ENST00000371447 CCDC192P0DO97 292 aa13.79□□□□□ -0.2
PDE6C-201ENST00000371447 MCM5P33992 734 aa13.79□□□□□ -0.2
PDE6C-201ENST00000371447 TRIM28Q13263 835 aaKnown RBP13.79□□□□□ -0.2
PDE6C-201ENST00000371447 ANO6Q4KMQ2 910 aa13.79□□□□□ -0.2
PDE6C-201ENST00000371447 TBC1D10CQ8IV04 446 aa13.79□□□□□ -0.2
PDE6C-201ENST00000371447 DNAJC25Q9H1X3 360 aa13.79□□□□□ -0.2
PDE6C-201ENST00000371447 IGHMBP2P38935 993 aaKnown RBP13.78□□□□□ -0.2
PDE6C-201ENST00000371447 EXOSC10Q01780 885 aaKnown RBP13.78□□□□□ -0.2
PDE6C-201ENST00000371447 INTS5Q6P9B9 1019 aaKnown RBP13.78□□□□□ -0.2
PDE6C-201ENST00000371447 NCOA7Q8NI08 942 aa13.78□□□□□ -0.2
PDE6C-201ENST00000371447 IL6STP40189 918 aaPredicted RBP13.78□□□□□ -0.2
PDE6C-201ENST00000371447 TDO2P48775 406 aa13.78□□□□□ -0.2
PDE6C-201ENST00000371447 C8orf76Q96K31 380 aa13.78□□□□□ -0.2
PDE6C-201ENST00000371447 RAI14Q9P0K7 980 aa13.78□□□□□ -0.2
PDE6C-201ENST00000371447 ARFGEF2Q9Y6D5 1785 aa13.77□□□□□ -0.2
PDE6C-201ENST00000371447 RESTQ13127 1097 aa13.77□□□□□ -0.2
PDE6C-201ENST00000371447 PUM3Q15397 648 aaKnown RBP13.77□□□□□ -0.2
PDE6C-201ENST00000371447 C3orf67Q6ZVT6 689 aa13.77□□□□□ -0.2
PDE6C-201ENST00000371447 CCAR1Q8IX12 1150 aaKnown RBP13.77□□□□□ -0.2
PDE6C-201ENST00000371447 SPATA5Q8NB90 893 aa13.77□□□□□ -0.2
PDE6C-201ENST00000371447 TMEM87AQ8NBN3 555 aa13.77□□□□□ -0.2
PDE6C-201ENST00000371447 PIBF1Q8WXW3 757 aa13.77□□□□□ -0.2
PDE6C-201ENST00000371447 NAPBQ9H115 298 aa13.77□□□□□ -0.2
PDE6C-201ENST00000371447 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.77□□□□□ -0.2
PDE6C-201ENST00000371447 MARCKSP29966 332 aaPredicted RBP13.77□□□□□ -0.21
PDE6C-201ENST00000371447 TYRO3Q06418 890 aa13.77□□□□□ -0.21
PDE6C-201ENST00000371447 NUP133Q8WUM0 1156 aa13.77□□□□□ -0.21
PDE6C-201ENST00000371447 PALLDQ8WX93 1383 aa13.77□□□□□ -0.21
PDE6C-201ENST00000371447 A0A1B0GVL5 298 aa13.77□□□□□ -0.21
PDE6C-201ENST00000371447 AP5Z1O43299 807 aa13.77□□□□□ -0.21
PDE6C-201ENST00000371447 SLC5A1P13866 664 aa13.77□□□□□ -0.21
PDE6C-201ENST00000371447 SASS6Q6UVJ0 657 aa13.77□□□□□ -0.21
PDE6C-201ENST00000371447 CYB5R4Q7L1T6 521 aa13.77□□□□□ -0.21
PDE6C-201ENST00000371447 SLC51AQ86UW1 340 aa13.77□□□□□ -0.21
PDE6C-201ENST00000371447 SDR42E1Q8WUS8 393 aa13.77□□□□□ -0.21
PDE6C-201ENST00000371447 SRP68Q9UHB9 627 aaKnown RBP13.77□□□□□ -0.21
PDE6C-201ENST00000371447 MTMR7Q9Y216 660 aa13.77□□□□□ -0.21
PDE6C-201ENST00000371447 BCL9O00512 1426 aa13.77□□□□□ -0.21
PDE6C-201ENST00000371447 EP400Q96L91 3159 aa13.76□□□□□ -0.21
PDE6C-201ENST00000371447 BIN1O00499 593 aa13.76□□□□□ -0.21
PDE6C-201ENST00000371447 ADD2P35612 726 aa13.76□□□□□ -0.21
PDE6C-201ENST00000371447 ANTXR2P58335 489 aa13.76□□□□□ -0.21
PDE6C-201ENST00000371447 CHAF1AQ13111 956 aaPredicted RBP13.76□□□□□ -0.21
PDE6C-201ENST00000371447 CCDC39Q9UFE4 941 aa13.76□□□□□ -0.21
PDE6C-201ENST00000371447 PRDM1O75626 825 aa13.76□□□□□ -0.21
PDE6C-201ENST00000371447 ZFYP08048 801 aaPredicted RBP13.76□□□□□ -0.21
PDE6C-201ENST00000371447 EIF5P55010 431 aaKnown RBP13.76□□□□□ -0.21
PDE6C-201ENST00000371447 N4BP2Q86UW6 1770 aaPredicted RBP13.76□□□□□ -0.21
PDE6C-201ENST00000371447 hCG_1642624A0A1W2PR95 340 aa13.75□□□□□ -0.21
PDE6C-201ENST00000371447 FDPSP14324 419 aaKnown RBP13.75□□□□□ -0.21
PDE6C-201ENST00000371447 ERFEQ4G0M1 354 aa13.75□□□□□ -0.21
PDE6C-201ENST00000371447 LPIN2Q92539 896 aa13.75□□□□□ -0.21
PDE6C-201ENST00000371447 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.75□□□□□ -0.21
PDE6C-201ENST00000371447 FSIP1Q8NA03 581 aa13.75□□□□□ -0.21
PDE6C-201ENST00000371447 PDLIM2Q96JY6 352 aa13.75□□□□□ -0.21
PDE6C-201ENST00000371447 SDF4Q9BRK5 362 aa13.75□□□□□ -0.21
PDE6C-201ENST00000371447 TFCP2L1Q9NZI6 479 aa13.75□□□□□ -0.21
PDE6C-201ENST00000371447 CFAP45Q9UL16 551 aa13.75□□□□□ -0.21
PDE6C-201ENST00000371447 SLC4A4Q9Y6R1 1079 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms