RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 GGA3Q9NZ52 723 aa8.46□□□□□ -1.05
USP1-202ENST00000371146 PEAK1Q9H792 1746 aa8.46□□□□□ -1.05
USP1-202ENST00000371146 PDE8BO95263 885 aa8.46□□□□□ -1.06
USP1-202ENST00000371146 CHGBP05060 677 aa8.46□□□□□ -1.06
USP1-202ENST00000371146 ATP2B4P23634 1241 aa8.46□□□□□ -1.06
USP1-202ENST00000371146 RAB3GAP1Q15042 981 aa8.46□□□□□ -1.06
USP1-202ENST00000371146 AMOTL1Q8IY63 956 aa8.46□□□□□ -1.06
USP1-202ENST00000371146 USP40Q9NVE5 1235 aa8.46□□□□□ -1.06
USP1-202ENST00000371146 BIN2Q9UBW5 565 aaPredicted RBP8.46□□□□□ -1.06
USP1-202ENST00000371146 ZNRF3Q9ULT6 936 aa8.46□□□□□ -1.06
USP1-202ENST00000371146 ANGEL1Q9UNK9 670 aaKnown RBP8.46□□□□□ -1.06
USP1-202ENST00000371146 PDZRN3Q9UPQ7 1066 aa8.46□□□□□ -1.06
USP1-202ENST00000371146 CELF2O95319 508 aaKnown RBP8.46□□□□□ -1.06
USP1-202ENST00000371146 PUM3Q15397 648 aaKnown RBP8.46□□□□□ -1.06
USP1-202ENST00000371146 NBPF9Q3BBW0 867 aa8.46□□□□□ -1.06
USP1-202ENST00000371146 GRIPAP1Q4V328 841 aa8.46□□□□□ -1.06
USP1-202ENST00000371146 CCDC102BQ68D86 513 aa8.46□□□□□ -1.06
USP1-202ENST00000371146 CEP85Q6P2H3 762 aa8.46□□□□□ -1.06
USP1-202ENST00000371146 LARP6Q9BRS8 491 aaKnown RBP8.46□□□□□ -1.06
USP1-202ENST00000371146 ANTXR1Q9H6X2 564 aa8.46□□□□□ -1.06
USP1-202ENST00000371146 CD209Q9NNX6 404 aa8.46□□□□□ -1.06
USP1-202ENST00000371146 USP17L3A6NCW0 530 aa8.45□□□□□ -1.06
USP1-202ENST00000371146 USP17L4A6NCW7 530 aa8.45□□□□□ -1.06
USP1-202ENST00000371146 IGHDP01880 384 aa8.45□□□□□ -1.06
USP1-202ENST00000371146 USP17L1Q7RTZ2 530 aa8.45□□□□□ -1.06
USP1-202ENST00000371146 TGFBRAP1Q8WUH2 860 aa8.45□□□□□ -1.06
USP1-202ENST00000371146 FOXD4L1Q9NU39 408 aa8.45□□□□□ -1.06
USP1-202ENST00000371146 NFKBIEO00221 500 aa8.45□□□□□ -1.06
USP1-202ENST00000371146 ZBTB7BO15156 539 aaPredicted RBP8.45□□□□□ -1.06
USP1-202ENST00000371146 EPHX2P34913 555 aa8.45□□□□□ -1.06
USP1-202ENST00000371146 ATP8B2P98198 1209 aa8.45□□□□□ -1.06
USP1-202ENST00000371146 MAP3K12Q12852 859 aa8.45□□□□□ -1.06
USP1-202ENST00000371146 SOGA3Q5TF21 947 aa8.45□□□□□ -1.06
USP1-202ENST00000371146 EAF2Q96CJ1 260 aaPredicted RBP8.45□□□□□ -1.06
USP1-202ENST00000371146 HACL1Q9UJ83 578 aa8.45□□□□□ -1.06
USP1-202ENST00000371146 BRPF3Q9ULD4 1205 aa8.45□□□□□ -1.06
USP1-202ENST00000371146 UBE2Q2LH0YL09 131 aa8.45□□□□□ -1.06
USP1-202ENST00000371146 HUNKP57058 714 aa8.45□□□□□ -1.06
USP1-202ENST00000371146 PTPN12Q05209 780 aaKnown RBP8.45□□□□□ -1.06
USP1-202ENST00000371146 MKNK2Q9HBH9 465 aa8.45□□□□□ -1.06
USP1-202ENST00000371146 RANBP6O60518 1105 aaKnown RBP8.44□□□□□ -1.06
USP1-202ENST00000371146 IGSF3O75054 1194 aa8.44□□□□□ -1.06
USP1-202ENST00000371146 CLSTN1O94985 981 aa8.44□□□□□ -1.06
USP1-202ENST00000371146 CCDC129Q6ZRS4 1044 aa8.44□□□□□ -1.06
USP1-202ENST00000371146 TEX11Q8IYF3 940 aa8.44□□□□□ -1.06
USP1-202ENST00000371146 MCM9Q9NXL9 1143 aa8.44□□□□□ -1.06
USP1-202ENST00000371146 ASTN2O75129 1339 aaPredicted RBP8.44□□□□□ -1.06
USP1-202ENST00000371146 ADM5C9JUS6 153 aa8.44□□□□□ -1.06
USP1-202ENST00000371146 PLS1Q14651 629 aa8.44□□□□□ -1.06
USP1-202ENST00000371146 CFAP100Q494V2 611 aa8.44□□□□□ -1.06
USP1-202ENST00000371146 RPAP2Q8IXW5 612 aaPredicted RBP8.44□□□□□ -1.06
USP1-202ENST00000371146 SP8Q8IXZ3 490 aa8.44□□□□□ -1.06
USP1-202ENST00000371146 SDR42E1Q8WUS8 393 aa8.44□□□□□ -1.06
USP1-202ENST00000371146 BSDC1Q9NW68 430 aaPredicted RBP8.44□□□□□ -1.06
USP1-202ENST00000371146 CT47B1P0C2W7 299 aaPredicted RBP8.43□□□□□ -1.06
USP1-202ENST00000371146 CASC1Q6TDU7 716 aa8.43□□□□□ -1.06
USP1-202ENST00000371146 LPIN2Q92539 896 aa8.43□□□□□ -1.06
USP1-202ENST00000371146 STX8Q9UNK0 236 aa8.43□□□□□ -1.06
USP1-202ENST00000371146 NCAPD2Q15021 1401 aa8.43□□□□□ -1.06
USP1-202ENST00000371146 ERC2O15083 957 aa8.43□□□□□ -1.06
USP1-202ENST00000371146 EGFRP00533 1210 aa8.43□□□□□ -1.06
USP1-202ENST00000371146 PDE3AQ14432 1141 aa8.43□□□□□ -1.06
USP1-202ENST00000371146 KIF4BQ2VIQ3 1234 aa8.43□□□□□ -1.06
USP1-202ENST00000371146 ERC1Q8IUD2 1116 aa8.43□□□□□ -1.06
USP1-202ENST00000371146 PDCL3Q9H2J4 239 aa8.43□□□□□ -1.06
USP1-202ENST00000371146 ARMT1Q9H993 441 aa8.43□□□□□ -1.06
USP1-202ENST00000371146 DYNLL1P63167 89 aaKnown RBP8.43□□□□□ -1.06
USP1-202ENST00000371146 FOXO4P98177 505 aa8.43□□□□□ -1.06
USP1-202ENST00000371146 TNNI3KQ59H18 835 aa8.43□□□□□ -1.06
USP1-202ENST00000371146 VAT1LQ9HCJ6 419 aa8.43□□□□□ -1.06
USP1-202ENST00000371146 FPGT-TNNI3KV9GXZ4 949 aa8.43□□□□□ -1.06
USP1-202ENST00000371146 ZNF541Q9H0D2 1346 aa8.43□□□□□ -1.06
USP1-202ENST00000371146 ALS2Q96Q42 1657 aa8.42□□□□□ -1.06
USP1-202ENST00000371146 CNTROBQ8N137 903 aa8.42□□□□□ -1.06
USP1-202ENST00000371146 TEKT1Q969V4 418 aa8.42□□□□□ -1.06
USP1-202ENST00000371146 TCEANC2Q96MN5 208 aa8.42□□□□□ -1.06
USP1-202ENST00000371146 SEC62Q99442 399 aaKnown RBP8.42□□□□□ -1.06
USP1-202ENST00000371146 IQCA1LA6NCM1 817 aa8.42□□□□□ -1.06
USP1-202ENST00000371146 SCARF1Q14162 830 aa8.42□□□□□ -1.06
USP1-202ENST00000371146 FOXD4L6Q3SYB3 417 aaPredicted RBP8.42□□□□□ -1.06
USP1-202ENST00000371146 STYK1Q6J9G0 422 aa8.42□□□□□ -1.06
USP1-202ENST00000371146 FOXD4L3Q6VB84 417 aaPredicted RBP8.42□□□□□ -1.06
USP1-202ENST00000371146 CRAMP1Q96RY5 1269 aa8.42□□□□□ -1.06
USP1-202ENST00000371146 KCNG1Q9UIX4 513 aa8.42□□□□□ -1.06
USP1-202ENST00000371146 PALD1Q9ULE6 856 aa8.42□□□□□ -1.06
USP1-202ENST00000371146 PLCH1Q4KWH8 1693 aa8.42□□□□□ -1.06
USP1-202ENST00000371146 MMP14P50281 582 aa8.42□□□□□ -1.06
USP1-202ENST00000371146 CHST3Q7LGC8 479 aa8.42□□□□□ -1.06
USP1-202ENST00000371146 FAM84BQ96KN1 310 aaPredicted RBP8.42□□□□□ -1.06
USP1-202ENST00000371146 KIF20BQ96Q89 1820 aa8.41□□□□□ -1.06
USP1-202ENST00000371146 PHRF1Q9P1Y6 1649 aaKnown RBP8.41□□□□□ -1.06
USP1-202ENST00000371146 CYP2D7A0A087X1C5 515 aa8.41□□□□□ -1.06
USP1-202ENST00000371146 TRIM75PA6NK02 468 aa8.41□□□□□ -1.06
USP1-202ENST00000371146 GDF11O95390 407 aa8.41□□□□□ -1.06
USP1-202ENST00000371146 MX1P20591 662 aa8.41□□□□□ -1.06
USP1-202ENST00000371146 ZNF157P51786 506 aaPredicted RBP8.41□□□□□ -1.06
USP1-202ENST00000371146 INTS3Q68E01 1043 aaKnown RBP8.41□□□□□ -1.06
USP1-202ENST00000371146 ANKRD44Q8N8A2 993 aa8.41□□□□□ -1.06
USP1-202ENST00000371146 SPATA5Q8NB90 893 aa8.41□□□□□ -1.06
USP1-202ENST00000371146 RGS22Q8NE09 1264 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms