RNA–Protein interactions for RNA: ENST00000370886.9

EXOSC1-203, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 741 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-203ENST00000370886 RNF186Q9NXI6 227 aa13.28□□□□□ -0.28
EXOSC1-203ENST00000370886 POLLQ9UGP5 575 aa13.28□□□□□ -0.28
EXOSC1-203ENST00000370886 SNAP23O00161 211 aa13.27□□□□□ -0.29
EXOSC1-203ENST00000370886 EYA2O00167 538 aa13.27□□□□□ -0.29
EXOSC1-203ENST00000370886 SURF6O75683 361 aaKnown RBP13.27□□□□□ -0.29
EXOSC1-203ENST00000370886 G3BP1Q13283 466 aaKnown RBP eCLIP13.27□□□□□ -0.29
EXOSC1-203ENST00000370886 PKN2Q16513 984 aaKnown RBP13.27□□□□□ -0.29
EXOSC1-203ENST00000370886 XDHP47989 1333 aa13.27□□□□□ -0.29
EXOSC1-203ENST00000370886 COL4A1P02462 1669 aa13.27□□□□□ -0.29
EXOSC1-203ENST00000370886 LRRC37AA6NMS7 1700 aa13.26□□□□□ -0.29
EXOSC1-203ENST00000370886 APBB1O00213 710 aa13.26□□□□□ -0.29
EXOSC1-203ENST00000370886 SLC10A3P09131 477 aa13.26□□□□□ -0.29
EXOSC1-203ENST00000370886 ATP2B4P23634 1241 aa13.26□□□□□ -0.29
EXOSC1-203ENST00000370886 RPS12P25398 132 aaKnown RBP13.26□□□□□ -0.29
EXOSC1-203ENST00000370886 MTX1Q13505 466 aa13.26□□□□□ -0.29
EXOSC1-203ENST00000370886 DOK7Q18PE1 504 aa13.26□□□□□ -0.29
EXOSC1-203ENST00000370886 WASHC4Q2M389 1173 aa13.26□□□□□ -0.29
EXOSC1-203ENST00000370886 ZC3H12CQ9C0D7 883 aaKnown RBP13.26□□□□□ -0.29
EXOSC1-203ENST00000370886 RIPOR2Q9Y4F9 1068 aa13.26□□□□□ -0.29
EXOSC1-203ENST00000370886 DUOX1Q9NRD9 1551 aa13.25□□□□□ -0.29
EXOSC1-203ENST00000370886 ZNF804BA4D1E1 1349 aa13.25□□□□□ -0.29
EXOSC1-203ENST00000370886 MROH5Q6ZUA9 1318 aa13.25□□□□□ -0.29
EXOSC1-203ENST00000370886 SHTN1A0MZ66 631 aa13.25□□□□□ -0.29
EXOSC1-203ENST00000370886 YDJCA8MPS7 323 aa13.25□□□□□ -0.29
EXOSC1-203ENST00000370886 HMMRO75330 724 aa13.25□□□□□ -0.29
EXOSC1-203ENST00000370886 TBC1D10BQ4KMP7 808 aaPredicted RBP13.25□□□□□ -0.29
EXOSC1-203ENST00000370886 SAMD7Q7Z3H4 446 aa13.25□□□□□ -0.29
EXOSC1-203ENST00000370886 SULF1Q8IWU6 871 aa13.25□□□□□ -0.29
EXOSC1-203ENST00000370886 RPAP2Q8IXW5 612 aaPredicted RBP13.25□□□□□ -0.29
EXOSC1-203ENST00000370886 EYA3Q99504 573 aa13.25□□□□□ -0.29
EXOSC1-203ENST00000370886 COPRSQ9NQ92 184 aa13.25□□□□□ -0.29
EXOSC1-203ENST00000370886 HPS5Q9UPZ3 1129 aa13.25□□□□□ -0.29
EXOSC1-203ENST00000370886 ZBTB12Q9Y330 459 aaPredicted RBP13.25□□□□□ -0.29
EXOSC1-203ENST00000370886 PSMD14O00487 310 aa13.24□□□□□ -0.29
EXOSC1-203ENST00000370886 IL15P40933 162 aaPredicted RBP13.24□□□□□ -0.29
EXOSC1-203ENST00000370886 POLA2Q14181 598 aa13.24□□□□□ -0.29
EXOSC1-203ENST00000370886 ATG9AQ7Z3C6 839 aa13.24□□□□□ -0.29
EXOSC1-203ENST00000370886 SSH3Q8TE77 659 aa13.24□□□□□ -0.29
EXOSC1-203ENST00000370886 PODXL2Q9NZ53 605 aa13.24□□□□□ -0.29
EXOSC1-203ENST00000370886 CEP126Q9P2H0 1117 aa13.24□□□□□ -0.29
EXOSC1-203ENST00000370886 HDAC9Q9UKV0 1011 aa13.24□□□□□ -0.29
EXOSC1-203ENST00000370886 LEMD3Q9Y2U8 911 aa13.24□□□□□ -0.29
EXOSC1-203ENST00000370886 ADM5C9JUS6 153 aa13.23□□□□□ -0.29
EXOSC1-203ENST00000370886 CIAO1O76071 339 aa13.23□□□□□ -0.29
EXOSC1-203ENST00000370886 KLRK1P26718 216 aa13.23□□□□□ -0.29
EXOSC1-203ENST00000370886 TFCP2Q12800 502 aa13.23□□□□□ -0.29
EXOSC1-203ENST00000370886 KIF4BQ2VIQ3 1234 aa13.23□□□□□ -0.29
EXOSC1-203ENST00000370886 SIRT2Q8IXJ6 389 aa13.23□□□□□ -0.29
EXOSC1-203ENST00000370886 CSRNP1Q96S65 589 aa13.23□□□□□ -0.29
EXOSC1-203ENST00000370886 DBNDD1Q9H9R9 158 aa13.23□□□□□ -0.29
EXOSC1-203ENST00000370886 EXOC6BQ9Y2D4 811 aa13.23□□□□□ -0.29
EXOSC1-203ENST00000370886 PCDHB15Q9Y5E8 787 aa13.23□□□□□ -0.29
EXOSC1-203ENST00000370886 PDE8BO95263 885 aa13.22□□□□□ -0.29
EXOSC1-203ENST00000370886 NEFLP07196 543 aa13.22□□□□□ -0.29
EXOSC1-203ENST00000370886 RBM26Q5T8P6 1007 aaKnown RBP13.22□□□□□ -0.29
EXOSC1-203ENST00000370886 DLK2Q6UY11 383 aa13.22□□□□□ -0.29
EXOSC1-203ENST00000370886 FBXW7Q969H0 707 aa13.22□□□□□ -0.29
EXOSC1-203ENST00000370886 GGA3Q9NZ52 723 aa13.22□□□□□ -0.29
EXOSC1-203ENST00000370886 TAF1P21675 1872 aa13.22□□□□□ -0.29
EXOSC1-203ENST00000370886 PAPPA2Q9BXP8 1791 aa13.22□□□□□ -0.29
EXOSC1-203ENST00000370886 FKBP1BP68106 108 aa13.21□□□□□ -0.29
EXOSC1-203ENST00000370886 TXNRD3Q86VQ6 643 aa13.21□□□□□ -0.29
EXOSC1-203ENST00000370886 RASAL3Q86YV0 1011 aa13.21□□□□□ -0.29
EXOSC1-203ENST00000370886 NEUROD6Q96NK8 337 aa13.21□□□□□ -0.29
EXOSC1-203ENST00000370886 FBXO3Q9UK99 471 aa13.21□□□□□ -0.29
EXOSC1-203ENST00000370886 ECE2O60344 883 aa13.2□□□□□ -0.3
EXOSC1-203ENST00000370886 EGFRP00533 1210 aa13.2□□□□□ -0.3
EXOSC1-203ENST00000370886 IFIT1P09914 478 aaKnown RBP13.2□□□□□ -0.3
EXOSC1-203ENST00000370886 SLC5A1P13866 664 aa13.2□□□□□ -0.3
EXOSC1-203ENST00000370886 GYG1P46976 350 aa13.2□□□□□ -0.3
EXOSC1-203ENST00000370886 UBE4AQ14139 1066 aa13.2□□□□□ -0.3
EXOSC1-203ENST00000370886 PUM3Q15397 648 aaKnown RBP13.2□□□□□ -0.3
EXOSC1-203ENST00000370886 ATP2B3Q16720 1220 aa13.2□□□□□ -0.3
EXOSC1-203ENST00000370886 VPS37DQ86XT2 251 aa13.2□□□□□ -0.3
EXOSC1-203ENST00000370886 CDCA5Q96FF9 252 aa13.2□□□□□ -0.3
EXOSC1-203ENST00000370886 SASH1O94885 1247 aa13.19□□□□□ -0.3
EXOSC1-203ENST00000370886 TIMM10P62072 90 aa13.19□□□□□ -0.3
EXOSC1-203ENST00000370886 HSP90AB4PQ58FF6 505 aa13.19□□□□□ -0.3
EXOSC1-203ENST00000370886 GORABQ5T7V8 394 aa13.19□□□□□ -0.3
EXOSC1-203ENST00000370886 ZNF296Q8WUU4 475 aaPredicted RBP13.19□□□□□ -0.3
EXOSC1-203ENST00000370886 KCNQ5Q9NR82 932 aa13.19□□□□□ -0.3
EXOSC1-203ENST00000370886 FRAT2O75474 233 aaPredicted RBP13.18□□□□□ -0.3
EXOSC1-203ENST00000370886 HIBADHP31937 336 aaKnown RBP13.18□□□□□ -0.3
EXOSC1-203ENST00000370886 BCAMP50895 628 aa13.18□□□□□ -0.3
EXOSC1-203ENST00000370886 CAVIN4Q5BKX8 364 aa13.18□□□□□ -0.3
EXOSC1-203ENST00000370886 NOM1Q5C9Z4 860 aaKnown RBP13.18□□□□□ -0.3
EXOSC1-203ENST00000370886 FBXO46Q6PJ61 603 aaPredicted RBP13.18□□□□□ -0.3
EXOSC1-203ENST00000370886 ZNF804AQ7Z570 1209 aa13.18□□□□□ -0.3
EXOSC1-203ENST00000370886 VGLL2Q8N8G2 317 aa13.18□□□□□ -0.3
EXOSC1-203ENST00000370886 LPIN2Q92539 896 aa13.18□□□□□ -0.3
EXOSC1-203ENST00000370886 IL1RAPL2Q9NP60 686 aa13.18□□□□□ -0.3
EXOSC1-203ENST00000370886 IQSEC3Q9UPP2 1182 aaPredicted RBP13.18□□□□□ -0.3
EXOSC1-203ENST00000370886 JAG2Q9Y219 1238 aa13.18□□□□□ -0.3
EXOSC1-203ENST00000370886 AKAP2Q9Y2D5 859 aa13.18□□□□□ -0.3
EXOSC1-203ENST00000370886 NOP58Q9Y2X3 529 aaKnown RBP13.18□□□□□ -0.3
EXOSC1-203ENST00000370886 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.18□□□□□ -0.3
EXOSC1-203ENST00000370886 SCN9AQ15858 1988 aa13.18□□□□□ -0.3
EXOSC1-203ENST00000370886 ZNF609O15014 1411 aa13.17□□□□□ -0.3
EXOSC1-203ENST00000370886 ADORA1P30542 326 aa13.17□□□□□ -0.3
EXOSC1-203ENST00000370886 ERC1Q8IUD2 1116 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms