RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 CSRNP1Q96S65 589 aa19.06■□□□□ 0.64
SS18L1-202ENST00000370848 MCOLN1Q9GZU1 580 aa19.06■□□□□ 0.64
SS18L1-202ENST00000370848 BICC1Q9H694 974 aaKnown RBP19.06■□□□□ 0.64
SS18L1-202ENST00000370848 ANKRD18BA2A2Z9 1011 aa19.05■□□□□ 0.64
SS18L1-202ENST00000370848 FKBP1AP62942 108 aaKnown RBP19.05■□□□□ 0.64
SS18L1-202ENST00000370848 TTLL5Q6EMB2 1281 aa19.05■□□□□ 0.64
SS18L1-202ENST00000370848 ANKRD44Q8N8A2 993 aa19.05■□□□□ 0.64
SS18L1-202ENST00000370848 MXD3Q9BW11 206 aa19.05■□□□□ 0.64
SS18L1-202ENST00000370848 RNF186Q9NXI6 227 aa19.05■□□□□ 0.64
SS18L1-202ENST00000370848 ARAP2Q8WZ64 1704 aa19.05■□□□□ 0.64
SS18L1-202ENST00000370848 IL1R1P14778 569 aa19.04■□□□□ 0.64
SS18L1-202ENST00000370848 ATF7IPQ6VMQ6 1270 aa19.04■□□□□ 0.64
SS18L1-202ENST00000370848 ZNF594Q96JF6 807 aaPredicted RBP19.04■□□□□ 0.64
SS18L1-202ENST00000370848 CD209Q9NNX6 404 aa19.04■□□□□ 0.64
SS18L1-202ENST00000370848 IFIT5Q13325 482 aaKnown RBP19.03■□□□□ 0.64
SS18L1-202ENST00000370848 APOBEC3FQ8IUX4 373 aaKnown RBP19.03■□□□□ 0.64
SS18L1-202ENST00000370848 MEIS3Q99687 375 aa19.03■□□□□ 0.64
SS18L1-202ENST00000370848 IPO8O15397 1037 aaKnown RBP19.02■□□□□ 0.64
SS18L1-202ENST00000370848 RABL6Q3YEC7 729 aaPredicted RBP19.02■□□□□ 0.64
SS18L1-202ENST00000370848 NOM1Q5C9Z4 860 aaKnown RBP19.02■□□□□ 0.64
SS18L1-202ENST00000370848 ZKSCAN2Q63HK3 967 aa19.02■□□□□ 0.64
SS18L1-202ENST00000370848 INTS3Q68E01 1043 aaKnown RBP19.02■□□□□ 0.64
SS18L1-202ENST00000370848 TNRC18O15417 2968 aaPredicted RBP19.02■□□□□ 0.63
SS18L1-202ENST00000370848 GTF2IP78347 998 aa19.01■□□□□ 0.63
SS18L1-202ENST00000370848 CERS5Q8N5B7 392 aa19.01■□□□□ 0.63
SS18L1-202ENST00000370848 CFHR5Q9BXR6 569 aa19.01■□□□□ 0.63
SS18L1-202ENST00000370848 HDAC9Q9UKV0 1011 aa19.01■□□□□ 0.63
SS18L1-202ENST00000370848 CCDC57Q2TAC2 916 aa19■□□□□ 0.63
SS18L1-202ENST00000370848 LDLRAD1Q5T700 205 aa19■□□□□ 0.63
SS18L1-202ENST00000370848 TMEM57Q8N5G2 664 aa19■□□□□ 0.63
SS18L1-202ENST00000370848 SSC5DA1L4H1 1573 aa18.99■□□□□ 0.63
SS18L1-202ENST00000370848 TRPA1O75762 1119 aa18.99■□□□□ 0.63
SS18L1-202ENST00000370848 SASH1O94885 1247 aa18.99■□□□□ 0.63
SS18L1-202ENST00000370848 UBTFL1P0CB47 393 aaPredicted RBP18.99■□□□□ 0.63
SS18L1-202ENST00000370848 RLBP1P12271 317 aa18.99■□□□□ 0.63
SS18L1-202ENST00000370848 KCNJ4P48050 445 aa18.99■□□□□ 0.63
SS18L1-202ENST00000370848 TM4SF4P48230 202 aa18.99■□□□□ 0.63
SS18L1-202ENST00000370848 DGKZQ13574 1117 aa18.99■□□□□ 0.63
SS18L1-202ENST00000370848 MAP3K11Q16584 847 aa18.99■□□□□ 0.63
SS18L1-202ENST00000370848 KIAA0825Q8IV33 1275 aa18.99■□□□□ 0.63
SS18L1-202ENST00000370848 PPP2R3BQ9Y5P8 575 aa18.99■□□□□ 0.63
SS18L1-202ENST00000370848 FAM205AQ6ZU69 1335 aa18.99■□□□□ 0.63
SS18L1-202ENST00000370848 UNCXA6NJT0 531 aa18.98■□□□□ 0.63
SS18L1-202ENST00000370848 SNAP23O00161 211 aa18.98■□□□□ 0.63
SS18L1-202ENST00000370848 TAF5LO75529 589 aa18.98■□□□□ 0.63
SS18L1-202ENST00000370848 NF2P35240 595 aa18.98■□□□□ 0.63
SS18L1-202ENST00000370848 TAF7LQ5H9L4 462 aa18.98■□□□□ 0.63
SS18L1-202ENST00000370848 MOB2Q70IA6 237 aa18.98■□□□□ 0.63
SS18L1-202ENST00000370848 ZNF804AQ7Z570 1209 aa18.98■□□□□ 0.63
SS18L1-202ENST00000370848 HELBQ8NG08 1087 aaPredicted RBP18.98■□□□□ 0.63
SS18L1-202ENST00000370848 KLHDC4Q8TBB5 520 aa18.98■□□□□ 0.63
SS18L1-202ENST00000370848 PUS3Q9BZE2 481 aaKnown RBP18.98■□□□□ 0.63
SS18L1-202ENST00000370848 LRRFIP2Q9Y608 721 aaKnown RBP18.98■□□□□ 0.63
SS18L1-202ENST00000370848 CCDC85CA6NKD9 419 aa18.97■□□□□ 0.63
SS18L1-202ENST00000370848 RCAN3Q9UKA8 241 aa18.97■□□□□ 0.63
SS18L1-202ENST00000370848 SCAF8Q9UPN6 1271 aaKnown RBP18.97■□□□□ 0.63
SS18L1-202ENST00000370848 UBE2Q2LH0YL09 131 aa18.96■□□□□ 0.63
SS18L1-202ENST00000370848 UBE4AQ14139 1066 aa18.96■□□□□ 0.63
SS18L1-202ENST00000370848 PRAMEF18Q5VWM3 479 aa18.96■□□□□ 0.63
SS18L1-202ENST00000370848 LDHAL6AQ6ZMR3 332 aa18.96■□□□□ 0.63
SS18L1-202ENST00000370848 FBXW7Q969H0 707 aa18.96■□□□□ 0.63
SS18L1-202ENST00000370848 SPDYE2BA6NHP3 402 aa18.95■□□□□ 0.62
SS18L1-202ENST00000370848 SPDYE6P0CI01 402 aa18.95■□□□□ 0.62
SS18L1-202ENST00000370848 RFX5P48382 616 aaPredicted RBP18.95■□□□□ 0.62
SS18L1-202ENST00000370848 DZIP1LQ8IYY4 767 aaKnown RBP18.95■□□□□ 0.62
SS18L1-202ENST00000370848 TDRD7Q8NHU6 1098 aaKnown RBP18.95■□□□□ 0.62
SS18L1-202ENST00000370848 CNNM1Q9NRU3 951 aa18.95■□□□□ 0.62
SS18L1-202ENST00000370848 PLIN1O60240 522 aa18.94■□□□□ 0.62
SS18L1-202ENST00000370848 MLLT1Q03111 559 aaPredicted RBP18.94■□□□□ 0.62
SS18L1-202ENST00000370848 DLGAP5Q15398 846 aa18.94■□□□□ 0.62
SS18L1-202ENST00000370848 LRRC24Q50LG9 513 aa18.94■□□□□ 0.62
SS18L1-202ENST00000370848 ARMC9Q7Z3E5 817 aa18.94■□□□□ 0.62
SS18L1-202ENST00000370848 CTU1Q7Z7A3 348 aaKnown RBP18.94■□□□□ 0.62
SS18L1-202ENST00000370848 FTSJ3Q8IY81 847 aaKnown RBP18.94■□□□□ 0.62
SS18L1-202ENST00000370848 PANK1Q8TE04 598 aa18.94■□□□□ 0.62
SS18L1-202ENST00000370848 DEFB129Q9H1M3 183 aa18.94■□□□□ 0.62
SS18L1-202ENST00000370848 HTTP42858 3142 aa18.94■□□□□ 0.62
SS18L1-202ENST00000370848 PTPN12Q05209 780 aaKnown RBP18.93■□□□□ 0.62
SS18L1-202ENST00000370848 RIPOR2Q9Y4F9 1068 aa18.93■□□□□ 0.62
SS18L1-202ENST00000370848 GNAI3P08754 354 aa18.92■□□□□ 0.62
SS18L1-202ENST00000370848 SREBF2Q12772 1141 aa18.92■□□□□ 0.62
SS18L1-202ENST00000370848 SPRYD7Q5W111 196 aa18.92■□□□□ 0.62
SS18L1-202ENST00000370848 ITPRIPQ8IWB1 547 aa18.92■□□□□ 0.62
SS18L1-202ENST00000370848 ZBTB48P10074 688 aaPredicted RBP18.91■□□□□ 0.62
SS18L1-202ENST00000370848 PKN2Q16513 984 aaKnown RBP18.91■□□□□ 0.62
SS18L1-202ENST00000370848 CFAP100Q494V2 611 aa18.91■□□□□ 0.62
SS18L1-202ENST00000370848 FAM84BQ96KN1 310 aaPredicted RBP18.91■□□□□ 0.62
SS18L1-202ENST00000370848 PRMT6Q96LA8 375 aaPredicted RBP18.91■□□□□ 0.62
SS18L1-202ENST00000370848 SERPINA10Q9UK55 444 aa18.91■□□□□ 0.62
SS18L1-202ENST00000370848 OTOFQ9HC10 1997 aa18.91■□□□□ 0.62
SS18L1-202ENST00000370848 MROH5Q6ZUA9 1318 aa18.91■□□□□ 0.62
SS18L1-202ENST00000370848 VGLL2Q8N8G2 317 aa18.9■□□□□ 0.62
SS18L1-202ENST00000370848 C1orf115Q9H7X2 142 aa18.9■□□□□ 0.62
SS18L1-202ENST00000370848 PA2G4Q9UQ80 394 aaKnown RBP18.9■□□□□ 0.62
SS18L1-202ENST00000370848 PCDHAC2Q9Y5I4 1007 aa18.9■□□□□ 0.62
SS18L1-202ENST00000370848 MYO1BO43795 1136 aa18.89■□□□□ 0.61
SS18L1-202ENST00000370848 INHBEP58166 350 aa18.89■□□□□ 0.61
SS18L1-202ENST00000370848 TTLL12Q14166 644 aaPredicted RBP18.89■□□□□ 0.61
SS18L1-202ENST00000370848 ZNF296Q8WUU4 475 aaPredicted RBP18.89■□□□□ 0.61
SS18L1-202ENST00000370848 AOX1Q06278 1338 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms