RNA–Protein interactions for RNA: ENST00000369709.3

RAP1A-202, Transcript of RAP1A, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1A, Length 5,024 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1A-202ENST00000369709 ZMYND10O75800 440 aa14.09□□□□□ -0.15
RAP1A-202ENST00000369709 PAFAH1B1P43034 410 aa14.09□□□□□ -0.15
RAP1A-202ENST00000369709 SARM1Q6SZW1 724 aa14.09□□□□□ -0.15
RAP1A-202ENST00000369709 MTMR7Q9Y216 660 aa14.09□□□□□ -0.15
RAP1A-202ENST00000369709 E4F1Q66K89 784 aaPredicted RBP14.09□□□□□ -0.15
RAP1A-202ENST00000369709 MSL1Q68DK7 614 aa14.09□□□□□ -0.15
RAP1A-202ENST00000369709 FAM212AQ96EL1 285 aa14.09□□□□□ -0.15
RAP1A-202ENST00000369709 ATP2B2Q01814 1243 aa14.08□□□□□ -0.15
RAP1A-202ENST00000369709 SF3A3Q12874 501 aaKnown RBP eCLIP14.08□□□□□ -0.15
RAP1A-202ENST00000369709 MMS22LQ6ZRQ5 1243 aa14.08□□□□□ -0.15
RAP1A-202ENST00000369709 EDC3Q96F86 508 aaKnown RBP14.08□□□□□ -0.15
RAP1A-202ENST00000369709 SEC62Q99442 399 aaKnown RBP14.08□□□□□ -0.15
RAP1A-202ENST00000369709 TANGO6Q9C0B7 1094 aa14.08□□□□□ -0.15
RAP1A-202ENST00000369709 LCMT1Q9UIC8 334 aa14.08□□□□□ -0.15
RAP1A-202ENST00000369709 NFE2L3Q9Y4A8 694 aa14.08□□□□□ -0.15
RAP1A-202ENST00000369709 CCDC61Q9Y6R9 512 aa14.08□□□□□ -0.15
RAP1A-202ENST00000369709 CLSTN1O94985 981 aa14.08□□□□□ -0.16
RAP1A-202ENST00000369709 MCMDC2Q4G0Z9 681 aa14.08□□□□□ -0.16
RAP1A-202ENST00000369709 CCDC113Q9H0I3 377 aa14.08□□□□□ -0.16
RAP1A-202ENST00000369709 A0A087WUV0 522 aaPredicted RBP14.08□□□□□ -0.16
RAP1A-202ENST00000369709 A0A0D9SFI3 127 aa14.08□□□□□ -0.16
RAP1A-202ENST00000369709 DHX32Q7L7V1 743 aaKnown RBP14.08□□□□□ -0.16
RAP1A-202ENST00000369709 SRGAP1Q7Z6B7 1085 aa14.08□□□□□ -0.16
RAP1A-202ENST00000369709 DHX40Q8IX18 779 aaKnown RBP14.08□□□□□ -0.16
RAP1A-202ENST00000369709 NCAPGQ9BPX3 1015 aa14.08□□□□□ -0.16
RAP1A-202ENST00000369709 ABCC10Q5T3U5 1492 aa14.08□□□□□ -0.16
RAP1A-202ENST00000369709 ARMCX5Q6P1M9 558 aa14.08□□□□□ -0.16
RAP1A-202ENST00000369709 ZNF530Q6P9A1 599 aaPredicted RBP14.08□□□□□ -0.16
RAP1A-202ENST00000369709 IFT81Q8WYA0 676 aa14.08□□□□□ -0.16
RAP1A-202ENST00000369709 STAP2Q9UGK3 403 aa14.08□□□□□ -0.16
RAP1A-202ENST00000369709 HPDP32754 393 aaPredicted RBP14.07□□□□□ -0.16
RAP1A-202ENST00000369709 CWF19L2Q2TBE0 894 aaKnown RBP14.07□□□□□ -0.16
RAP1A-202ENST00000369709 NYAP1Q6ZVC0 841 aa14.07□□□□□ -0.16
RAP1A-202ENST00000369709 CCDC85AQ96PX6 553 aaPredicted RBP14.07□□□□□ -0.16
RAP1A-202ENST00000369709 GOLPH3LQ9H4A5 285 aa14.07□□□□□ -0.16
RAP1A-202ENST00000369709 MACROD2A1Z1Q3 448 aa14.07□□□□□ -0.16
RAP1A-202ENST00000369709 ENOX2Q16206 610 aaKnown RBP14.07□□□□□ -0.16
RAP1A-202ENST00000369709 TADA2BQ86TJ2 420 aa14.07□□□□□ -0.16
RAP1A-202ENST00000369709 TTC14Q96N46 770 aa14.07□□□□□ -0.16
RAP1A-202ENST00000369709 MYD88Q99836 296 aa14.07□□□□□ -0.16
RAP1A-202ENST00000369709 SNRKQ9NRH2 765 aa14.07□□□□□ -0.16
RAP1A-202ENST00000369709 DNAJC5BQ9UF47 199 aa14.07□□□□□ -0.16
RAP1A-202ENST00000369709 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.07□□□□□ -0.16
RAP1A-202ENST00000369709 CCDC151A5D8V7 595 aa14.07□□□□□ -0.16
RAP1A-202ENST00000369709 ATP1A2P50993 1020 aa14.07□□□□□ -0.16
RAP1A-202ENST00000369709 SPECC1LQ69YQ0 1117 aa14.07□□□□□ -0.16
RAP1A-202ENST00000369709 B4GALNT4Q76KP1 1039 aa14.07□□□□□ -0.16
RAP1A-202ENST00000369709 ANKRD18AQ8IVF6 992 aa14.07□□□□□ -0.16
RAP1A-202ENST00000369709 NCKAP5LQ9HCH0 1330 aa14.07□□□□□ -0.16
RAP1A-202ENST00000369709 ADGRL1O94910 1474 aa14.07□□□□□ -0.16
RAP1A-202ENST00000369709 MARCH6O60337 910 aa14.07□□□□□ -0.16
RAP1A-202ENST00000369709 MYCNP04198 464 aaPredicted RBP14.07□□□□□ -0.16
RAP1A-202ENST00000369709 PFKFB1P16118 471 aa14.07□□□□□ -0.16
RAP1A-202ENST00000369709 IDI1Q13907 227 aa14.07□□□□□ -0.16
RAP1A-202ENST00000369709 CCDC96Q2M329 555 aa14.07□□□□□ -0.16
RAP1A-202ENST00000369709 ANO1Q5XXA6 986 aa14.07□□□□□ -0.16
RAP1A-202ENST00000369709 KLHDC4Q8TBB5 520 aa14.07□□□□□ -0.16
RAP1A-202ENST00000369709 METAP2P50579 478 aaKnown RBP eCLIP14.06□□□□□ -0.16
RAP1A-202ENST00000369709 SLF1Q9BQI6 1058 aa14.06□□□□□ -0.16
RAP1A-202ENST00000369709 FUCA2Q9BTY2 467 aa14.06□□□□□ -0.16
RAP1A-202ENST00000369709 SLC26A6Q9BXS9 759 aa14.06□□□□□ -0.16
RAP1A-202ENST00000369709 CLIC4Q9Y696 253 aa14.06□□□□□ -0.16
RAP1A-202ENST00000369709 ZFYVE9O95405 1425 aa14.06□□□□□ -0.16
RAP1A-202ENST00000369709 IFIT1P09914 478 aaKnown RBP14.06□□□□□ -0.16
RAP1A-202ENST00000369709 CASP8Q14790 479 aa14.06□□□□□ -0.16
RAP1A-202ENST00000369709 CCDC122Q5T0U0 273 aa14.06□□□□□ -0.16
RAP1A-202ENST00000369709 SND1Q7KZF4 910 aaKnown RBP eCLIP14.06□□□□□ -0.16
RAP1A-202ENST00000369709 ZNF446Q9NWS9 450 aa14.06□□□□□ -0.16
RAP1A-202ENST00000369709 A0A1B0GUA9 196 aa14.06□□□□□ -0.16
RAP1A-202ENST00000369709 TUBB4BP68371 445 aa14.06□□□□□ -0.16
RAP1A-202ENST00000369709 RRAGBQ5VZM2 374 aa14.06□□□□□ -0.16
RAP1A-202ENST00000369709 IL25Q9H293 177 aa14.06□□□□□ -0.16
RAP1A-202ENST00000369709 GOLGA8AA7E2F4 631 aa14.06□□□□□ -0.16
RAP1A-202ENST00000369709 CCDC178Q5BJE1 867 aa14.06□□□□□ -0.16
RAP1A-202ENST00000369709 ADALQ6DHV7 355 aa14.06□□□□□ -0.16
RAP1A-202ENST00000369709 TOGARAM2Q6ZUX3 1019 aa14.06□□□□□ -0.16
RAP1A-202ENST00000369709 CAPS2Q9BXY5 557 aa14.06□□□□□ -0.16
RAP1A-202ENST00000369709 TADA3O75528 432 aa14.05□□□□□ -0.16
RAP1A-202ENST00000369709 ZNF827Q17R98 1081 aa14.05□□□□□ -0.16
RAP1A-202ENST00000369709 ZNF213O14771 459 aa14.05□□□□□ -0.16
RAP1A-202ENST00000369709 IARSP41252 1262 aaKnown RBP14.05□□□□□ -0.16
RAP1A-202ENST00000369709 IFFO1Q0D2I5 559 aa14.05□□□□□ -0.16
RAP1A-202ENST00000369709 NUTM2AQ8IVF1 878 aaPredicted RBP14.05□□□□□ -0.16
RAP1A-202ENST00000369709 UBAC1Q9BSL1 405 aa14.05□□□□□ -0.16
RAP1A-202ENST00000369709 USP44Q9H0E7 712 aa14.05□□□□□ -0.16
RAP1A-202ENST00000369709 USO1O60763 962 aaKnown RBP14.05□□□□□ -0.16
RAP1A-202ENST00000369709 SCRN1Q12765 414 aa14.05□□□□□ -0.16
RAP1A-202ENST00000369709 ATL3Q6DD88 541 aa14.05□□□□□ -0.16
RAP1A-202ENST00000369709 NAA16Q6N069 864 aaPredicted RBP14.05□□□□□ -0.16
RAP1A-202ENST00000369709 ABTB2Q8N961 1025 aa14.05□□□□□ -0.16
RAP1A-202ENST00000369709 MED4Q9NPJ6 270 aa14.05□□□□□ -0.16
RAP1A-202ENST00000369709 CEP131Q9UPN4 1083 aa14.05□□□□□ -0.16
RAP1A-202ENST00000369709 TTC37Q6PGP7 1564 aa14.05□□□□□ -0.16
RAP1A-202ENST00000369709 TUBBP07437 444 aa14.05□□□□□ -0.16
RAP1A-202ENST00000369709 MUM1L1Q5H9M0 696 aa14.05□□□□□ -0.16
RAP1A-202ENST00000369709 CTAGE1Q96RT6 745 aa14.05□□□□□ -0.16
RAP1A-202ENST00000369709 MRC2Q9UBG0 1479 aa14.05□□□□□ -0.16
RAP1A-202ENST00000369709 EPS15P42566 896 aa14.04□□□□□ -0.16
RAP1A-202ENST00000369709 PSME1Q06323 249 aa14.04□□□□□ -0.16
RAP1A-202ENST00000369709 MPRIPQ6WCQ1 1025 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms