RNA–Protein interactions for RNA: ENST00000369553.5

HIPK1-203, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 2,883 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-203ENST00000369553 PIP4K2BP78356 416 aa12.1□□□□□ -0.47
HIPK1-203ENST00000369553 ZRSR2Q15696 482 aaKnown RBP12.1□□□□□ -0.47
HIPK1-203ENST00000369553 SLC4A10Q6U841 1118 aa12.1□□□□□ -0.47
HIPK1-203ENST00000369553 CYP2E1P05181 493 aaPredicted RBP12.09□□□□□ -0.47
HIPK1-203ENST00000369553 ZNF396Q96N95 335 aaPredicted RBP12.09□□□□□ -0.47
HIPK1-203ENST00000369553 MEIS3Q99687 375 aa12.09□□□□□ -0.47
HIPK1-203ENST00000369553 SPATS2LQ9NUQ6 558 aaKnown RBP12.09□□□□□ -0.47
HIPK1-203ENST00000369553 ADAM21Q9UKJ8 722 aa12.09□□□□□ -0.47
HIPK1-203ENST00000369553 CCP110O43303 1012 aa12.09□□□□□ -0.47
HIPK1-203ENST00000369553 GCFC2P16383 781 aaKnown RBP12.09□□□□□ -0.47
HIPK1-203ENST00000369553 EFCAB13Q8IY85 973 aa12.09□□□□□ -0.47
HIPK1-203ENST00000369553 RPUSD2Q8IZ73 545 aaKnown RBP12.09□□□□□ -0.47
HIPK1-203ENST00000369553 MICAL1Q8TDZ2 1067 aa12.09□□□□□ -0.47
HIPK1-203ENST00000369553 N4BP2Q86UW6 1770 aaPredicted RBP12.09□□□□□ -0.47
HIPK1-203ENST00000369553 SKAP2O75563 359 aaPredicted RBP12.08□□□□□ -0.47
HIPK1-203ENST00000369553 SEC31AO94979 1220 aaKnown RBP12.08□□□□□ -0.47
HIPK1-203ENST00000369553 NAP1L1P55209 391 aaKnown RBP12.08□□□□□ -0.47
HIPK1-203ENST00000369553 FBXW10Q5XX13 1052 aa12.08□□□□□ -0.47
HIPK1-203ENST00000369553 ZNF790Q6PG37 636 aa12.08□□□□□ -0.47
HIPK1-203ENST00000369553 CCDC34Q96HJ3 373 aa12.08□□□□□ -0.47
HIPK1-203ENST00000369553 PCDHGA4Q9Y5G9 962 aa12.08□□□□□ -0.47
HIPK1-203ENST00000369553 SETDB1Q15047 1291 aa12.08□□□□□ -0.48
HIPK1-203ENST00000369553 EXOC4Q96A65 974 aa12.08□□□□□ -0.48
HIPK1-203ENST00000369553 PCDH11XQ9BZA7 1347 aa12.08□□□□□ -0.48
HIPK1-203ENST00000369553 PCDH11YQ9BZA8 1340 aa12.08□□□□□ -0.48
HIPK1-203ENST00000369553 FRMD3A2A2Y4 597 aa12.08□□□□□ -0.48
HIPK1-203ENST00000369553 ZRANB2O95218 330 aaKnown RBP eCLIP12.08□□□□□ -0.48
HIPK1-203ENST00000369553 MBD3O95983 291 aa12.08□□□□□ -0.48
HIPK1-203ENST00000369553 NEDD9Q14511 834 aa12.08□□□□□ -0.48
HIPK1-203ENST00000369553 PROSER3Q2NL68 480 aa12.08□□□□□ -0.48
HIPK1-203ENST00000369553 MSL3Q8N5Y2 521 aaKnown RBP12.08□□□□□ -0.48
HIPK1-203ENST00000369553 PLEKHA4Q9H4M7 779 aa12.08□□□□□ -0.48
HIPK1-203ENST00000369553 TMEM165Q9HC07 324 aa12.08□□□□□ -0.48
HIPK1-203ENST00000369553 ATP10DQ9P241 1426 aa12.07□□□□□ -0.48
HIPK1-203ENST00000369553 IBSPP21815 317 aaPredicted RBP12.07□□□□□ -0.48
HIPK1-203ENST00000369553 CCT4P50991 539 aaKnown RBP12.07□□□□□ -0.48
HIPK1-203ENST00000369553 SCRN1Q12765 414 aa12.07□□□□□ -0.48
HIPK1-203ENST00000369553 ZBTB10Q96DT7 871 aa12.07□□□□□ -0.48
HIPK1-203ENST00000369553 BAG1Q99933 345 aaPredicted RBP12.07□□□□□ -0.48
HIPK1-203ENST00000369553 KIF9Q9HAQ2 790 aa12.07□□□□□ -0.48
HIPK1-203ENST00000369553 PLCH1Q4KWH8 1693 aa12.07□□□□□ -0.48
HIPK1-203ENST00000369553 SLU7O95391 586 aaKnown RBP12.07□□□□□ -0.48
HIPK1-203ENST00000369553 CABP4P57796 275 aa12.07□□□□□ -0.48
HIPK1-203ENST00000369553 DHX8Q14562 1220 aaKnown RBP12.07□□□□□ -0.48
HIPK1-203ENST00000369553 SMC1AQ14683 1233 aaKnown RBP12.07□□□□□ -0.48
HIPK1-203ENST00000369553 TMCO3Q6UWJ1 677 aa12.07□□□□□ -0.48
HIPK1-203ENST00000369553 MYLK4Q86YV6 388 aaPredicted RBP12.07□□□□□ -0.48
HIPK1-203ENST00000369553 ARL10Q8N8L6 244 aa12.07□□□□□ -0.48
HIPK1-203ENST00000369553 LRRN4CLQ8ND94 238 aa12.07□□□□□ -0.48
HIPK1-203ENST00000369553 ARMC2Q8NEN0 867 aa12.07□□□□□ -0.48
HIPK1-203ENST00000369553 DDX54Q8TDD1 881 aaKnown RBP12.07□□□□□ -0.48
HIPK1-203ENST00000369553 UBXN6Q9BZV1 441 aa12.07□□□□□ -0.48
HIPK1-203ENST00000369553 LMCD1Q9NZU5 365 aa12.07□□□□□ -0.48
HIPK1-203ENST00000369553 TOM1O60784 492 aa12.06□□□□□ -0.48
HIPK1-203ENST00000369553 SNUPNO95149 360 aaKnown RBP12.06□□□□□ -0.48
HIPK1-203ENST00000369553 MRFAP1L1Q96HT8 127 aa12.06□□□□□ -0.48
HIPK1-203ENST00000369553 ZNF496Q96IT1 587 aaPredicted RBP12.06□□□□□ -0.48
HIPK1-203ENST00000369553 TOGARAM1Q9Y4F4 1720 aa12.06□□□□□ -0.48
HIPK1-203ENST00000369553 KIF2AO00139 706 aaPredicted RBP12.06□□□□□ -0.48
HIPK1-203ENST00000369553 ADAMTS2O95450 1211 aa12.06□□□□□ -0.48
HIPK1-203ENST00000369553 NKX1-1Q15270 411 aaPredicted RBP12.06□□□□□ -0.48
HIPK1-203ENST00000369553 RBBP5Q15291 538 aaKnown RBP12.06□□□□□ -0.48
HIPK1-203ENST00000369553 STAG1Q8WVM7 1258 aa12.06□□□□□ -0.48
HIPK1-203ENST00000369553 YIPF2Q9BWQ6 316 aa12.06□□□□□ -0.48
HIPK1-203ENST00000369553 MCM8Q9UJA3 840 aa12.06□□□□□ -0.48
HIPK1-203ENST00000369553 GLI3P10071 1580 aa12.06□□□□□ -0.48
HIPK1-203ENST00000369553 A0A087WUV0 522 aaPredicted RBP12.05□□□□□ -0.48
HIPK1-203ENST00000369553 SASH3O75995 380 aa12.05□□□□□ -0.48
HIPK1-203ENST00000369553 GCKP35557 465 aa12.05□□□□□ -0.48
HIPK1-203ENST00000369553 LIG3P49916 1009 aa12.05□□□□□ -0.48
HIPK1-203ENST00000369553 FAM177A1Q8N128 213 aaPredicted RBP12.05□□□□□ -0.48
HIPK1-203ENST00000369553 CHCHD3Q9NX63 227 aaKnown RBP12.05□□□□□ -0.48
HIPK1-203ENST00000369553 PSD3Q9NYI0 1048 aa12.05□□□□□ -0.48
HIPK1-203ENST00000369553 ERLIN2O94905 339 aa12.05□□□□□ -0.48
HIPK1-203ENST00000369553 NAT1P18440 290 aa12.05□□□□□ -0.48
HIPK1-203ENST00000369553 CD151P48509 253 aa12.05□□□□□ -0.48
HIPK1-203ENST00000369553 SLC5A9Q2M3M2 681 aa12.05□□□□□ -0.48
HIPK1-203ENST00000369553 ARHGAP29Q52LW3 1261 aa12.05□□□□□ -0.48
HIPK1-203ENST00000369553 HHATQ5VTY9 493 aa12.05□□□□□ -0.48
HIPK1-203ENST00000369553 IRX2Q9BZI1 471 aaPredicted RBP12.05□□□□□ -0.48
HIPK1-203ENST00000369553 BLOC1S6Q9UL45 172 aa12.05□□□□□ -0.48
HIPK1-203ENST00000369553 ZDHHC9Q9Y397 364 aa12.05□□□□□ -0.48
HIPK1-203ENST00000369553 DISP2A7MBM2 1401 aa12.05□□□□□ -0.48
HIPK1-203ENST00000369553 NF2P35240 595 aa12.04□□□□□ -0.48
HIPK1-203ENST00000369553 USP8P40818 1118 aa12.04□□□□□ -0.48
HIPK1-203ENST00000369553 PEX19P40855 299 aa12.04□□□□□ -0.48
HIPK1-203ENST00000369553 MAGEA8P43361 318 aa12.04□□□□□ -0.48
HIPK1-203ENST00000369553 NUCB1Q02818 461 aa12.04□□□□□ -0.48
HIPK1-203ENST00000369553 USP4Q13107 963 aa12.04□□□□□ -0.48
HIPK1-203ENST00000369553 PDIA6Q15084 440 aa12.04□□□□□ -0.48
HIPK1-203ENST00000369553 CEP85Q6P2H3 762 aa12.04□□□□□ -0.48
HIPK1-203ENST00000369553 KIRREL3Q8IZU9 778 aa12.04□□□□□ -0.48
HIPK1-203ENST00000369553 ANKRD44Q8N8A2 993 aa12.04□□□□□ -0.48
HIPK1-203ENST00000369553 DBF4Q9UBU7 674 aaPredicted RBP12.04□□□□□ -0.48
HIPK1-203ENST00000369553 PXDNLA1KZ92 1463 aa12.04□□□□□ -0.48
HIPK1-203ENST00000369553 NRAPQ86VF7 1730 aa12.04□□□□□ -0.48
HIPK1-203ENST00000369553 ADCY9O60503 1353 aa12.04□□□□□ -0.48
HIPK1-203ENST00000369553 NUTM2BA6NNL0 878 aaPredicted RBP12.04□□□□□ -0.48
HIPK1-203ENST00000369553 NUTM2EB1AL46 878 aaPredicted RBP12.04□□□□□ -0.48
HIPK1-203ENST00000369553 UBAP1LF5GYI3 381 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms