RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 XDHP47989 1333 aa8.44□□□□□ -1.06
CSDE1-204ENST00000369530 FAM163AQ96GL9 167 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-204ENST00000369530 PLIN1O60240 522 aa8.44□□□□□ -1.06
CSDE1-204ENST00000369530 FAM161AQ3B820 660 aa8.44□□□□□ -1.06
CSDE1-204ENST00000369530 USP50Q70EL3 339 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-204ENST00000369530 FAM84BQ96KN1 310 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-204ENST00000369530 NOB1Q9ULX3 412 aaKnown RBP8.44□□□□□ -1.06
CSDE1-204ENST00000369530 LEMD3Q9Y2U8 911 aa8.44□□□□□ -1.06
CSDE1-204ENST00000369530 BCAR3O75815 825 aa8.43□□□□□ -1.06
CSDE1-204ENST00000369530 RPS12P25398 132 aaKnown RBP8.43□□□□□ -1.06
CSDE1-204ENST00000369530 ZFP91Q96JP5 570 aaPredicted RBP8.43□□□□□ -1.06
CSDE1-204ENST00000369530 ZNRF3Q9ULT6 936 aa8.43□□□□□ -1.06
CSDE1-204ENST00000369530 NPM3O75607 178 aaKnown RBP8.43□□□□□ -1.06
CSDE1-204ENST00000369530 GPTP24298 496 aa8.43□□□□□ -1.06
CSDE1-204ENST00000369530 RPS8P62241 208 aaKnown RBP8.43□□□□□ -1.06
CSDE1-204ENST00000369530 AGBL3Q8NEM8 1001 aa8.43□□□□□ -1.06
CSDE1-204ENST00000369530 ZNF277Q9NRM2 450 aaPredicted RBP8.43□□□□□ -1.06
CSDE1-204ENST00000369530 DNAH12Q6ZR08 3092 aa8.42□□□□□ -1.06
CSDE1-204ENST00000369530 UNCXA6NJT0 531 aa8.42□□□□□ -1.06
CSDE1-204ENST00000369530 ZNF500O60304 480 aaPredicted RBP8.42□□□□□ -1.06
CSDE1-204ENST00000369530 HSPA6P17066 643 aa8.42□□□□□ -1.06
CSDE1-204ENST00000369530 ATF7IPQ6VMQ6 1270 aa8.42□□□□□ -1.06
CSDE1-204ENST00000369530 RGS22Q8NE09 1264 aa8.42□□□□□ -1.06
CSDE1-204ENST00000369530 CHMP4AQ9BY43 222 aa8.42□□□□□ -1.06
CSDE1-204ENST00000369530 PUS3Q9BZE2 481 aaKnown RBP8.42□□□□□ -1.06
CSDE1-204ENST00000369530 ZNF112Q9UJU3 913 aa8.42□□□□□ -1.06
CSDE1-204ENST00000369530 ITGA6P23229 1130 aa8.42□□□□□ -1.06
CSDE1-204ENST00000369530 CCT4P50991 539 aaKnown RBP8.42□□□□□ -1.06
CSDE1-204ENST00000369530 NOM1Q5C9Z4 860 aaKnown RBP8.42□□□□□ -1.06
CSDE1-204ENST00000369530 TRPM4Q8TD43 1214 aa8.42□□□□□ -1.06
CSDE1-204ENST00000369530 ANP32BQ92688 251 aaKnown RBP8.42□□□□□ -1.06
CSDE1-204ENST00000369530 MROH5Q6ZUA9 1318 aa8.41□□□□□ -1.06
CSDE1-204ENST00000369530 FOXP2O15409 715 aa8.41□□□□□ -1.06
CSDE1-204ENST00000369530 CHRNDQ07001 517 aa8.41□□□□□ -1.06
CSDE1-204ENST00000369530 AOC3Q16853 763 aa8.41□□□□□ -1.06
CSDE1-204ENST00000369530 NLRP3Q96P20 1036 aa8.41□□□□□ -1.06
CSDE1-204ENST00000369530 TCRBV5S4A2TA0A5A2 114 aa8.41□□□□□ -1.06
CSDE1-204ENST00000369530 NOVP48745 357 aa8.41□□□□□ -1.06
CSDE1-204ENST00000369530 LDLRAD1Q5T700 205 aa8.41□□□□□ -1.06
CSDE1-204ENST00000369530 STRIP1Q5VSL9 837 aa8.41□□□□□ -1.06
CSDE1-204ENST00000369530 LDHDQ86WU2 507 aa8.41□□□□□ -1.06
CSDE1-204ENST00000369530 PANK2Q9BZ23 570 aa8.41□□□□□ -1.06
CSDE1-204ENST00000369530 TLL2Q9Y6L7 1015 aa8.41□□□□□ -1.06
CSDE1-204ENST00000369530 PNMA6EA0A0J9YXQ4 647 aa8.41□□□□□ -1.06
CSDE1-204ENST00000369530 CAP1Q01518 475 aa8.41□□□□□ -1.06
CSDE1-204ENST00000369530 FMR1Q06787 632 aaKnown RBP eCLIP8.41□□□□□ -1.061e-6■□□□□ 9.8
CSDE1-204ENST00000369530 WDR81Q562E7 1941 aa8.4□□□□□ -1.06
CSDE1-204ENST00000369530 EIF2S2P20042 333 aaKnown RBP8.4□□□□□ -1.06
CSDE1-204ENST00000369530 ATP2B4P23634 1241 aa8.4□□□□□ -1.06
CSDE1-204ENST00000369530 LRRC24Q50LG9 513 aa8.4□□□□□ -1.06
CSDE1-204ENST00000369530 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.4□□□□□ -1.06
CSDE1-204ENST00000369530 MEIS3Q99687 375 aa8.4□□□□□ -1.06
CSDE1-204ENST00000369530 SNRKQ9NRH2 765 aa8.4□□□□□ -1.06
CSDE1-204ENST00000369530 ASTN2O75129 1339 aaPredicted RBP8.4□□□□□ -1.06
CSDE1-204ENST00000369530 PSMD14O00487 310 aa8.4□□□□□ -1.06
CSDE1-204ENST00000369530 DDNO94850 711 aaPredicted RBP8.4□□□□□ -1.06
CSDE1-204ENST00000369530 RSBN1LQ6PCB5 846 aaPredicted RBP8.4□□□□□ -1.06
CSDE1-204ENST00000369530 GRPEL1Q9HAV7 217 aa8.4□□□□□ -1.06
CSDE1-204ENST00000369530 CREBZFQ9NS37 354 aa8.4□□□□□ -1.06
CSDE1-204ENST00000369530 TRMT112Q9UI30 125 aaKnown RBP8.4□□□□□ -1.06
CSDE1-204ENST00000369530 UBE4AQ14139 1066 aa8.4□□□□□ -1.07
CSDE1-204ENST00000369530 CEP85Q6P2H3 762 aa8.4□□□□□ -1.07
CSDE1-204ENST00000369530 POTEEQ6S8J3 1075 aa8.4□□□□□ -1.07
CSDE1-204ENST00000369530 HOMEZQ8IX15 550 aa8.4□□□□□ -1.07
CSDE1-204ENST00000369530 YY1AP1Q9H869 796 aa8.4□□□□□ -1.07
CSDE1-204ENST00000369530 ATG2AQ2TAZ0 1938 aa8.4□□□□□ -1.07
CSDE1-204ENST00000369530 ZNFX1Q9P2E3 1918 aaKnown RBP8.39□□□□□ -1.07
CSDE1-204ENST00000369530 ECE2O60344 883 aa8.39□□□□□ -1.07
CSDE1-204ENST00000369530 HDLBPQ00341 1268 aaKnown RBP8.39□□□□□ -1.07
CSDE1-204ENST00000369530 CCDC152Q4G0S7 254 aa8.39□□□□□ -1.07
CSDE1-204ENST00000369530 PODNQ7Z5L7 613 aa8.39□□□□□ -1.07
CSDE1-204ENST00000369530 ZSCAN30Q86W11 494 aa8.39□□□□□ -1.07
CSDE1-204ENST00000369530 EXOC6Q8TAG9 804 aa8.39□□□□□ -1.07
CSDE1-204ENST00000369530 COA1Q9GZY4 146 aa8.39□□□□□ -1.07
CSDE1-204ENST00000369530 BCS1LQ9Y276 419 aa8.39□□□□□ -1.07
CSDE1-204ENST00000369530 SUGT1Q9Y2Z0 365 aa8.39□□□□□ -1.07
CSDE1-204ENST00000369530 SIP14410 1827 aa8.39□□□□□ -1.07
CSDE1-204ENST00000369530 ROBO3Q96MS0 1386 aa8.39□□□□□ -1.07
CSDE1-204ENST00000369530 PDE8BO95263 885 aa8.39□□□□□ -1.07
CSDE1-204ENST00000369530 SECISBP2LQ93073 1101 aaKnown RBP8.39□□□□□ -1.07
CSDE1-204ENST00000369530 PTPRSQ13332 1948 aa8.38□□□□□ -1.07
CSDE1-204ENST00000369530 PHF20L1A8MW92 1017 aa8.38□□□□□ -1.07
CSDE1-204ENST00000369530 RNF181Q9P0P0 153 aa8.38□□□□□ -1.07
CSDE1-204ENST00000369530 EPS15P42566 896 aa8.38□□□□□ -1.07
CSDE1-204ENST00000369530 ATP8B2P98198 1209 aa8.38□□□□□ -1.07
CSDE1-204ENST00000369530 ZHX1Q9UKY1 873 aaPredicted RBP8.38□□□□□ -1.07
CSDE1-204ENST00000369530 CCDC173Q0VFZ6 552 aa8.38□□□□□ -1.07
CSDE1-204ENST00000369530 C20orf194Q5TEA3 1177 aa8.38□□□□□ -1.07
CSDE1-204ENST00000369530 FKBP1CQ5VVH2 108 aa8.38□□□□□ -1.07
CSDE1-204ENST00000369530 APOBEC3HQ6NTF7 200 aaKnown RBP8.38□□□□□ -1.07
CSDE1-204ENST00000369530 UBE3BQ7Z3V4 1068 aa8.38□□□□□ -1.07
CSDE1-204ENST00000369530 TMEM57Q8N5G2 664 aa8.38□□□□□ -1.07
CSDE1-204ENST00000369530 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.38□□□□□ -1.07
CSDE1-204ENST00000369530 SUPT20HQ8NEM7 779 aa8.38□□□□□ -1.07
CSDE1-204ENST00000369530 CD209Q9NNX6 404 aa8.38□□□□□ -1.07
CSDE1-204ENST00000369530 GTF2F1P35269 517 aaKnown RBP eCLIP8.37□□□□□ -1.071e-7■■■■■ 29.4
CSDE1-204ENST00000369530 RHBDL3P58872 404 aa8.37□□□□□ -1.07
CSDE1-204ENST00000369530 CENPQQ7L2Z9 268 aaPredicted RBP8.37□□□□□ -1.07
CSDE1-204ENST00000369530 CNKSR2Q8WXI2 1034 aa8.37□□□□□ -1.07
CSDE1-204ENST00000369530 RRAGCQ9HB90 399 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms