RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 SRCAPQ6ZRS2 3230 aa28.75■■■□□ 2.19
SNX3-203ENST00000368979 MAST3O60307 1309 aa28.75■■■□□ 2.19
SNX3-203ENST00000368979 ADD2P35612 726 aa28.74■■■□□ 2.19
SNX3-203ENST00000368979 IL17RAQ96F46 866 aa28.74■■■□□ 2.19
SNX3-203ENST00000368979 POLLQ9UGP5 575 aa28.74■■■□□ 2.19
SNX3-203ENST00000368979 IDH1O75874 414 aaKnown RBP28.74■■■□□ 2.19
SNX3-203ENST00000368979 APPBP2Q92624 585 aa28.74■■■□□ 2.19
SNX3-203ENST00000368979 CNKSR1Q969H4 720 aa28.74■■■□□ 2.19
SNX3-203ENST00000368979 SLX4Q8IY92 1834 aa28.73■■■□□ 2.19
SNX3-203ENST00000368979 ANAPC15P60006 121 aa28.73■■■□□ 2.19
SNX3-203ENST00000368979 PRPF40BQ6NWY9 871 aaKnown RBP28.73■■■□□ 2.19
SNX3-203ENST00000368979 CCDC129Q6ZRS4 1044 aa28.73■■■□□ 2.19
SNX3-203ENST00000368979 MAP4K1Q92918 833 aa28.73■■■□□ 2.19
SNX3-203ENST00000368979 OSBP2Q969R2 916 aa28.73■■■□□ 2.19
SNX3-203ENST00000368979 UBE3CQ15386 1083 aa28.72■■■□□ 2.19
SNX3-203ENST00000368979 ZNF804AQ7Z570 1209 aa28.72■■■□□ 2.19
SNX3-203ENST00000368979 GPR101Q96P66 508 aaPredicted RBP28.72■■■□□ 2.19
SNX3-203ENST00000368979 WWC3Q9ULE0 1092 aa28.72■■■□□ 2.19
SNX3-203ENST00000368979 PALD1Q9ULE6 856 aa28.72■■■□□ 2.19
SNX3-203ENST00000368979 MAP3K12Q12852 859 aa28.71■■■□□ 2.19
SNX3-203ENST00000368979 SLC9C2Q5TAH2 1124 aa28.71■■■□□ 2.19
SNX3-203ENST00000368979 KIAA1551Q9HCM1 1747 aa28.7■■■□□ 2.19
SNX3-203ENST00000368979 TCRBV5S4A2TA0A5A2 114 aa28.7■■■□□ 2.19
SNX3-203ENST00000368979 M0R2C6 588 aa28.7■■■□□ 2.19
SNX3-203ENST00000368979 PDE6AP16499 860 aa28.7■■■□□ 2.19
SNX3-203ENST00000368979 WASHC4Q2M389 1173 aa28.7■■■□□ 2.19
SNX3-203ENST00000368979 OLFM4Q6UX06 510 aa28.7■■■□□ 2.19
SNX3-203ENST00000368979 MPNDQ8N594 471 aa28.7■■■□□ 2.19
SNX3-203ENST00000368979 TDRD7Q8NHU6 1098 aaKnown RBP28.69■■■□□ 2.18
SNX3-203ENST00000368979 ATF5Q9Y2D1 282 aaPredicted RBP28.69■■■□□ 2.18
SNX3-203ENST00000368979 POLD1P28340 1107 aa28.69■■■□□ 2.18
SNX3-203ENST00000368979 NECTIN1Q15223 517 aa28.69■■■□□ 2.18
SNX3-203ENST00000368979 RABEP1Q15276 862 aa28.69■■■□□ 2.18
SNX3-203ENST00000368979 TMX4Q9H1E5 349 aaPredicted RBP28.69■■■□□ 2.18
SNX3-203ENST00000368979 RBM8AQ9Y5S9 174 aaKnown RBP28.69■■■□□ 2.18
SNX3-203ENST00000368979 ZNF532Q9HCE3 1301 aa28.68■■■□□ 2.18
SNX3-203ENST00000368979 C6orf229H3BNL8 230 aa28.68■■■□□ 2.18
SNX3-203ENST00000368979 FRAT2O75474 233 aaPredicted RBP28.68■■■□□ 2.18
SNX3-203ENST00000368979 KCNB2Q92953 911 aa28.68■■■□□ 2.18
SNX3-203ENST00000368979 PUS7LQ9H0K6 701 aaKnown RBP28.68■■■□□ 2.18
SNX3-203ENST00000368979 MAST2Q6P0Q8 1798 aa28.67■■■□□ 2.18
SNX3-203ENST00000368979 DPP8Q6V1X1 898 aaPredicted RBP28.67■■■□□ 2.18
SNX3-203ENST00000368979 LRP2BPQ9P2M1 347 aa28.67■■■□□ 2.18
SNX3-203ENST00000368979 SNED1Q8TER0 1413 aa28.67■■■□□ 2.18
SNX3-203ENST00000368979 IL1R1P14778 569 aa28.66■■■□□ 2.18
SNX3-203ENST00000368979 MAGEB6Q8N7X4 407 aa28.66■■■□□ 2.18
SNX3-203ENST00000368979 C7orf43Q8WVR3 580 aa28.66■■■□□ 2.18
SNX3-203ENST00000368979 DSCC1Q9BVC3 393 aa28.66■■■□□ 2.18
SNX3-203ENST00000368979 CD209Q9NNX6 404 aa28.66■■■□□ 2.18
SNX3-203ENST00000368979 SGIP1Q9BQI5 828 aa28.65■■■□□ 2.18
SNX3-203ENST00000368979 SALL1Q9NSC2 1324 aa28.65■■■□□ 2.18
SNX3-203ENST00000368979 SNX21Q969T3 373 aa28.64■■■□□ 2.18
SNX3-203ENST00000368979 ABCF2Q9UG63 623 aa28.64■■■□□ 2.18
SNX3-203ENST00000368979 SNX14Q9Y5W7 946 aa28.64■■■□□ 2.18
SNX3-203ENST00000368979 KCNA3P22001 575 aa28.64■■■□□ 2.17
SNX3-203ENST00000368979 BECN1Q14457 450 aa28.64■■■□□ 2.17
SNX3-203ENST00000368979 RASEFQ8IZ41 740 aa28.64■■■□□ 2.17
SNX3-203ENST00000368979 TBC1D2Q9BYX2 928 aa28.64■■■□□ 2.17
SNX3-203ENST00000368979 GPAA1O43292 621 aa28.63■■■□□ 2.17
SNX3-203ENST00000368979 DPEP1P16444 411 aa28.63■■■□□ 2.17
SNX3-203ENST00000368979 CHAF1AQ13111 956 aaPredicted RBP28.63■■■□□ 2.17
SNX3-203ENST00000368979 VPS53Q5VIR6 699 aa28.63■■■□□ 2.17
SNX3-203ENST00000368979 U3KPZ7 1027 aaPredicted RBP28.63■■■□□ 2.17
SNX3-203ENST00000368979 PSDA5PKW4 1024 aaPredicted RBP28.62■■■□□ 2.17
SNX3-203ENST00000368979 HSPD1P10809 573 aaKnown RBP28.62■■■□□ 2.17
SNX3-203ENST00000368979 CREB3L3Q68CJ9 461 aa28.62■■■□□ 2.17
SNX3-203ENST00000368979 CC2D2BQ6DHV5 1058 aa28.62■■■□□ 2.17
SNX3-203ENST00000368979 SLC27A2O14975 620 aa28.61■■■□□ 2.17
SNX3-203ENST00000368979 TGFB2P61812 414 aa28.61■■■□□ 2.17
SNX3-203ENST00000368979 TTLL6Q8N841 843 aa28.61■■■□□ 2.17
SNX3-203ENST00000368979 WDR66Q8TBY9 1149 aa28.61■■■□□ 2.17
SNX3-203ENST00000368979 RTFDC1Q9BY42 306 aaPredicted RBP28.61■■■□□ 2.17
SNX3-203ENST00000368979 RAI14Q9P0K7 980 aa28.61■■■□□ 2.17
SNX3-203ENST00000368979 IGSF3O75054 1194 aa28.6■■■□□ 2.17
SNX3-203ENST00000368979 ZGPATQ8N5A5 531 aaKnown RBP28.6■■■□□ 2.17
SNX3-203ENST00000368979 EYA3Q99504 573 aa28.6■■■□□ 2.17
SNX3-203ENST00000368979 COA1Q9GZY4 146 aa28.6■■■□□ 2.17
SNX3-203ENST00000368979 A0A0G2JLW4 131 aa28.59■■■□□ 2.17
SNX3-203ENST00000368979 FOXP2O15409 715 aa28.59■■■□□ 2.17
SNX3-203ENST00000368979 ERICH6Q7L0X2 663 aa28.59■■■□□ 2.17
SNX3-203ENST00000368979 ZC3H12CQ9C0D7 883 aaKnown RBP28.59■■■□□ 2.17
SNX3-203ENST00000368979 RNF20Q5VTR2 975 aa28.59■■■□□ 2.17
SNX3-203ENST00000368979 CCDC88AQ3V6T2 1871 aa28.58■■■□□ 2.17
SNX3-203ENST00000368979 RIMBP2O15034 1052 aa28.58■■■□□ 2.17
SNX3-203ENST00000368979 TMED8Q6PL24 325 aaPredicted RBP28.58■■■□□ 2.17
SNX3-203ENST00000368979 ZNF384Q8TF68 577 aa28.58■■■□□ 2.17
SNX3-203ENST00000368979 JAG2Q9Y219 1238 aa28.58■■■□□ 2.17
SNX3-203ENST00000368979 CD2BP2O95400 341 aaKnown RBP28.57■■■□□ 2.16
SNX3-203ENST00000368979 ZKSCAN1P17029 563 aaPredicted RBP28.57■■■□□ 2.16
SNX3-203ENST00000368979 CYP7A1P22680 504 aa28.57■■■□□ 2.16
SNX3-203ENST00000368979 PRDX5P30044 214 aa28.57■■■□□ 2.16
SNX3-203ENST00000368979 PTGER2P43116 358 aa28.57■■■□□ 2.16
SNX3-203ENST00000368979 SLC4A3P48751 1232 aa28.57■■■□□ 2.16
SNX3-203ENST00000368979 SPTY2D1Q68D10 685 aaPredicted RBP28.57■■■□□ 2.16
SNX3-203ENST00000368979 HSCBQ8IWL3 235 aa28.57■■■□□ 2.16
SNX3-203ENST00000368979 AIDAQ96BJ3 306 aa28.57■■■□□ 2.16
SNX3-203ENST00000368979 NSUN4Q96CB9 384 aaKnown RBP28.57■■■□□ 2.16
SNX3-203ENST00000368979 ZNF219Q9P2Y4 722 aaPredicted RBP28.57■■■□□ 2.16
SNX3-203ENST00000368979 BRCA1P38398 1863 aaKnown RBP28.56■■■□□ 2.16
SNX3-203ENST00000368979 TSGA10IPQ3SY00 556 aa28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms