RNA–Protein interactions for RNA: ENST00000368905.8

SCNM1-202, Transcript of sodium channel modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCNM1, Length 2,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-202ENST00000368905 DNAJA1P31689 397 aaKnown RBP11.72□□□□□ -0.53
SCNM1-202ENST00000368905 PIK3CAP42336 1068 aa11.72□□□□□ -0.53
SCNM1-202ENST00000368905 TSPYL6Q8N831 410 aa11.72□□□□□ -0.53
SCNM1-202ENST00000368905 PEAK1Q9H792 1746 aa11.71□□□□□ -0.53
SCNM1-202ENST00000368905 ZBTB7BO15156 539 aaPredicted RBP11.71□□□□□ -0.53
SCNM1-202ENST00000368905 RPN1P04843 607 aaKnown RBP11.71□□□□□ -0.53
SCNM1-202ENST00000368905 NUCB1Q02818 461 aa11.71□□□□□ -0.53
SCNM1-202ENST00000368905 TAF11Q15544 211 aa11.71□□□□□ -0.53
SCNM1-202ENST00000368905 MYO1HQ8N1T3 1032 aa11.71□□□□□ -0.53
SCNM1-202ENST00000368905 RELTQ969Z4 430 aa11.71□□□□□ -0.53
SCNM1-202ENST00000368905 FRMD6Q96NE9 622 aa11.71□□□□□ -0.53
SCNM1-202ENST00000368905 RABGAP1Q9Y3P9 1069 aa11.71□□□□□ -0.53
SCNM1-202ENST00000368905 NWD1Q149M9 1564 aa11.71□□□□□ -0.54
SCNM1-202ENST00000368905 KDRP35968 1356 aa11.71□□□□□ -0.54
SCNM1-202ENST00000368905 PTPRCP08575 1304 aa11.71□□□□□ -0.54
SCNM1-202ENST00000368905 CCDC172P0C7W6 258 aa11.7□□□□□ -0.54
SCNM1-202ENST00000368905 KCNA6P17658 529 aa11.7□□□□□ -0.54
SCNM1-202ENST00000368905 NLRP6P59044 892 aa11.7□□□□□ -0.54
SCNM1-202ENST00000368905 TMEM95Q3KNT9 176 aa11.7□□□□□ -0.54
SCNM1-202ENST00000368905 OTUD6AQ7L8S5 288 aa11.7□□□□□ -0.54
SCNM1-202ENST00000368905 C8orf58Q8NAV2 365 aa11.7□□□□□ -0.54
SCNM1-202ENST00000368905 UTP6Q9NYH9 597 aaKnown RBP11.7□□□□□ -0.54
SCNM1-202ENST00000368905 BIN2Q9UBW5 565 aaPredicted RBP11.7□□□□□ -0.54
SCNM1-202ENST00000368905 MAFFQ9ULX9 164 aa11.7□□□□□ -0.54
SCNM1-202ENST00000368905 RGPD8O14715 1765 aaPredicted RBP11.7□□□□□ -0.54
SCNM1-202ENST00000368905 USP54Q70EL1 1684 aa11.7□□□□□ -0.54
SCNM1-202ENST00000368905 FAM83GA6ND36 823 aa11.7□□□□□ -0.54
SCNM1-202ENST00000368905 TRIM6-TRIM34B2RNG4 842 aa11.7□□□□□ -0.54
SCNM1-202ENST00000368905 TNFRSF10BO14763 440 aa11.7□□□□□ -0.54
SCNM1-202ENST00000368905 BPNT1O95861 308 aa11.7□□□□□ -0.54
SCNM1-202ENST00000368905 TOMM20Q15388 145 aa11.7□□□□□ -0.54
SCNM1-202ENST00000368905 ZNF394Q53GI3 561 aa11.7□□□□□ -0.54
SCNM1-202ENST00000368905 PPP4R4Q6NUP7 873 aa11.7□□□□□ -0.54
SCNM1-202ENST00000368905 SMARCC1Q92922 1105 aaPredicted RBP11.7□□□□□ -0.54
SCNM1-202ENST00000368905 A6NJY4 79 aa11.69□□□□□ -0.54
SCNM1-202ENST00000368905 ELL2O00472 640 aaPredicted RBP11.69□□□□□ -0.54
SCNM1-202ENST00000368905 CAND2O75155 1236 aa11.69□□□□□ -0.54
SCNM1-202ENST00000368905 TPPPO94811 219 aa11.69□□□□□ -0.54
SCNM1-202ENST00000368905 DMTNQ08495 405 aa11.69□□□□□ -0.54
SCNM1-202ENST00000368905 ARHGEF25Q86VW2 580 aa11.69□□□□□ -0.54
SCNM1-202ENST00000368905 MPP4Q96JB8 637 aa11.69□□□□□ -0.54
SCNM1-202ENST00000368905 TBC1D32Q96NH3 1257 aa11.69□□□□□ -0.54
SCNM1-202ENST00000368905 MAP7D2Q96T17 732 aa11.69□□□□□ -0.54
SCNM1-202ENST00000368905 PPCSQ9HAB8 311 aa11.69□□□□□ -0.54
SCNM1-202ENST00000368905 EVLQ9UI08 416 aaPredicted RBP11.69□□□□□ -0.54
SCNM1-202ENST00000368905 PIK3C2AO00443 1686 aa11.69□□□□□ -0.54
SCNM1-202ENST00000368905 SOS1Q07889 1333 aaPredicted RBP11.69□□□□□ -0.54
SCNM1-202ENST00000368905 IGSF1Q8N6C5 1336 aa11.69□□□□□ -0.54
SCNM1-202ENST00000368905 A0A1W2PRQ8 180 aa11.69□□□□□ -0.54
SCNM1-202ENST00000368905 SLC26A4O43511 780 aa11.69□□□□□ -0.54
SCNM1-202ENST00000368905 CASP2P42575 452 aa11.69□□□□□ -0.54
SCNM1-202ENST00000368905 FERMT3Q86UX7 667 aa11.69□□□□□ -0.54
SCNM1-202ENST00000368905 CHD1LQ86WJ1 897 aa11.69□□□□□ -0.54
SCNM1-202ENST00000368905 MTMR14Q8NCE2 650 aa11.69□□□□□ -0.54
SCNM1-202ENST00000368905 HELQQ8TDG4 1101 aa11.69□□□□□ -0.54
SCNM1-202ENST00000368905 CHCHD3Q9NX63 227 aaKnown RBP11.69□□□□□ -0.54
SCNM1-202ENST00000368905 RABL2BQ9UNT1 228 aa11.69□□□□□ -0.54
SCNM1-202ENST00000368905 RTL1A6NKG5 1358 aa11.68□□□□□ -0.54
SCNM1-202ENST00000368905 USP19O94966 1318 aa11.68□□□□□ -0.54
SCNM1-202ENST00000368905 PALM3A6NDB9 673 aaPredicted RBP11.68□□□□□ -0.54
SCNM1-202ENST00000368905 KRT18P05783 430 aaKnown RBP11.68□□□□□ -0.54
SCNM1-202ENST00000368905 ZBED6P86452 979 aa11.68□□□□□ -0.54
SCNM1-202ENST00000368905 INO80DQ53TQ3 878 aaPredicted RBP11.68□□□□□ -0.54
SCNM1-202ENST00000368905 SOGA3Q5TF21 947 aa11.68□□□□□ -0.54
SCNM1-202ENST00000368905 IWS1Q96ST2 819 aa11.68□□□□□ -0.54
SCNM1-202ENST00000368905 NUCKS1Q9H1E3 243 aaKnown RBP11.68□□□□□ -0.54
SCNM1-202ENST00000368905 DNAJC21Q5F1R6 531 aaKnown RBP11.67□□□□□ -0.54
SCNM1-202ENST00000368905 INTS3Q68E01 1043 aaKnown RBP11.67□□□□□ -0.54
SCNM1-202ENST00000368905 TAS1R3Q7RTX0 852 aa11.67□□□□□ -0.54
SCNM1-202ENST00000368905 METTL16Q86W50 562 aaKnown RBP11.67□□□□□ -0.54
SCNM1-202ENST00000368905 ARNT2Q9HBZ2 717 aa11.67□□□□□ -0.54
SCNM1-202ENST00000368905 KMT5AQ9NQR1 393 aa11.67□□□□□ -0.54
SCNM1-202ENST00000368905 BABAM1Q9NWV8 329 aa11.67□□□□□ -0.54
SCNM1-202ENST00000368905 STRCP1A6NGW2 1772 aa11.67□□□□□ -0.54
SCNM1-202ENST00000368905 ZNF335Q9H4Z2 1342 aaPredicted RBP11.67□□□□□ -0.54
SCNM1-202ENST00000368905 KLHL33A6NCF5 533 aa11.67□□□□□ -0.54
SCNM1-202ENST00000368905 PRSS47A8MTI9 375 aa11.67□□□□□ -0.54
SCNM1-202ENST00000368905 ENPP3O14638 875 aa11.67□□□□□ -0.54
SCNM1-202ENST00000368905 TSPAN7P41732 249 aa11.67□□□□□ -0.54
SCNM1-202ENST00000368905 CRB1P82279 1406 aa11.67□□□□□ -0.54
SCNM1-202ENST00000368905 MCM10Q7L590 875 aa11.67□□□□□ -0.54
SCNM1-202ENST00000368905 ABTB2Q8N961 1025 aa11.67□□□□□ -0.54
SCNM1-202ENST00000368905 IKBKGQ9Y6K9 419 aa11.67□□□□□ -0.54
SCNM1-202ENST00000368905 TPM3P06753 285 aa11.66□□□□□ -0.54
SCNM1-202ENST00000368905 HOXD11P31277 338 aaPredicted RBP11.66□□□□□ -0.54
SCNM1-202ENST00000368905 SERPINB4P48594 390 aa11.66□□□□□ -0.54
SCNM1-202ENST00000368905 MYRIPQ8NFW9 859 aa11.66□□□□□ -0.54
SCNM1-202ENST00000368905 CENPTQ96BT3 561 aa11.66□□□□□ -0.54
SCNM1-202ENST00000368905 EYA1Q99502 592 aa11.66□□□□□ -0.54
SCNM1-202ENST00000368905 SEC24BO95487 1268 aa11.65□□□□□ -0.54
SCNM1-202ENST00000368905 SKILP12757 684 aa11.65□□□□□ -0.54
SCNM1-202ENST00000368905 CDC27P30260 824 aa11.65□□□□□ -0.54
SCNM1-202ENST00000368905 PPP2R5AQ15172 486 aa11.65□□□□□ -0.54
SCNM1-202ENST00000368905 BMP2KLQ5H9B9 411 aa11.65□□□□□ -0.54
SCNM1-202ENST00000368905 TAF4BQ92750 862 aa11.65□□□□□ -0.54
SCNM1-202ENST00000368905 VMP1Q96GC9 406 aa11.65□□□□□ -0.54
SCNM1-202ENST00000368905 CCSER2Q9H7U1 834 aa11.65□□□□□ -0.54
SCNM1-202ENST00000368905 TSPYL4Q9UJ04 414 aa11.65□□□□□ -0.54
SCNM1-202ENST00000368905 ZHX1Q9UKY1 873 aaPredicted RBP11.65□□□□□ -0.54
SCNM1-202ENST00000368905 GRXCR2A6NFK2 248 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms