RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 RPS8P62241 208 aaKnown RBP13.79□□□□□ -0.2
TUBE1-201ENST00000368657 SF3B3Q15393 1217 aaKnown RBP13.79□□□□□ -0.2
TUBE1-201ENST00000368657 TAF7Q15545 349 aaPredicted RBP13.79□□□□□ -0.2
TUBE1-201ENST00000368657 ANKIB1Q9P2G1 1089 aa13.79□□□□□ -0.2
TUBE1-201ENST00000368657 GGA1Q9UJY5 639 aa13.79□□□□□ -0.2
TUBE1-201ENST00000368657 MYO3BQ8WXR4 1341 aa13.79□□□□□ -0.2
TUBE1-201ENST00000368657 UFL1O94874 794 aa13.78□□□□□ -0.2
TUBE1-201ENST00000368657 MAGEA10P43363 369 aaPredicted RBP13.78□□□□□ -0.2
TUBE1-201ENST00000368657 TJAP1Q5JTD0 557 aa13.78□□□□□ -0.2
TUBE1-201ENST00000368657 NECAB2Q7Z6G3 386 aa13.78□□□□□ -0.2
TUBE1-201ENST00000368657 NLRP10Q86W26 655 aa13.78□□□□□ -0.2
TUBE1-201ENST00000368657 BRI3BPQ8WY22 251 aa13.78□□□□□ -0.2
TUBE1-201ENST00000368657 SNX27Q96L92 541 aa13.78□□□□□ -0.2
TUBE1-201ENST00000368657 ZCCHC17Q9NP64 241 aaKnown RBP13.78□□□□□ -0.2
TUBE1-201ENST00000368657 CCL15-CCL14A0A0B4J2E2 113 aa13.77□□□□□ -0.21
TUBE1-201ENST00000368657 USP2O75604 605 aaPredicted RBP13.77□□□□□ -0.21
TUBE1-201ENST00000368657 PSME4Q14997 1843 aa13.77□□□□□ -0.21
TUBE1-201ENST00000368657 CCL15Q16663 113 aa13.77□□□□□ -0.21
TUBE1-201ENST00000368657 EYSQ5T1H1 3165 aa13.77□□□□□ -0.21
TUBE1-201ENST00000368657 FAM205AQ6ZU69 1335 aa13.77□□□□□ -0.21
TUBE1-201ENST00000368657 C7orf61Q8IZ16 206 aa13.77□□□□□ -0.21
TUBE1-201ENST00000368657 OPTNQ96CV9 577 aa13.77□□□□□ -0.21
TUBE1-201ENST00000368657 ZMYND8Q9ULU4 1186 aaPredicted RBP13.77□□□□□ -0.21
TUBE1-201ENST00000368657 SASH1O94885 1247 aa13.76□□□□□ -0.21
TUBE1-201ENST00000368657 PSMC4P43686 418 aa13.76□□□□□ -0.21
TUBE1-201ENST00000368657 ZNF697Q5TEC3 545 aa13.76□□□□□ -0.21
TUBE1-201ENST00000368657 FAM43AQ8N2R8 423 aa13.76□□□□□ -0.21
TUBE1-201ENST00000368657 PAWRQ96IZ0 340 aaKnown RBP13.76□□□□□ -0.21
TUBE1-201ENST00000368657 FAM161BQ96MY7 647 aa13.76□□□□□ -0.21
TUBE1-201ENST00000368657 CDX2Q99626 313 aaPredicted RBP13.76□□□□□ -0.21
TUBE1-201ENST00000368657 KNSTRNQ9Y448 316 aa13.76□□□□□ -0.21
TUBE1-201ENST00000368657 PRUNE2Q8WUY3 3088 aa13.76□□□□□ -0.21
TUBE1-201ENST00000368657 U2SURPO15042 1029 aaKnown RBP13.75□□□□□ -0.21
TUBE1-201ENST00000368657 HTATSF1O43719 755 aaKnown RBP13.75□□□□□ -0.21
TUBE1-201ENST00000368657 DACT2Q5SW24 774 aa13.75□□□□□ -0.21
TUBE1-201ENST00000368657 MCM10Q7L590 875 aa13.75□□□□□ -0.21
TUBE1-201ENST00000368657 ZBED3Q96IU2 234 aaPredicted RBP13.75□□□□□ -0.21
TUBE1-201ENST00000368657 UNC93B1Q9H1C4 597 aa13.75□□□□□ -0.21
TUBE1-201ENST00000368657 FMNL1O95466 1100 aaPredicted RBP13.74□□□□□ -0.21
TUBE1-201ENST00000368657 OSBPP22059 807 aa13.74□□□□□ -0.21
TUBE1-201ENST00000368657 STRIP1Q5VSL9 837 aa13.74□□□□□ -0.21
TUBE1-201ENST00000368657 SLAIN1Q8ND83 568 aa13.74□□□□□ -0.21
TUBE1-201ENST00000368657 PNISRQ8TF01 805 aaKnown RBP13.74□□□□□ -0.21
TUBE1-201ENST00000368657 PHACTR3Q96KR7 559 aa13.74□□□□□ -0.21
TUBE1-201ENST00000368657 MYPNQ86TC9 1320 aa13.73□□□□□ -0.21
TUBE1-201ENST00000368657 ECM2O94769 699 aaPredicted RBP13.73□□□□□ -0.21
TUBE1-201ENST00000368657 EVX2Q03828 476 aa13.73□□□□□ -0.21
TUBE1-201ENST00000368657 C17orf99Q6UX52 265 aa13.73□□□□□ -0.21
TUBE1-201ENST00000368657 SP7Q8TDD2 431 aaPredicted RBP13.73□□□□□ -0.21
TUBE1-201ENST00000368657 ELP3Q9H9T3 547 aa13.73□□□□□ -0.21
TUBE1-201ENST00000368657 SSC5DA1L4H1 1573 aa13.73□□□□□ -0.21
TUBE1-201ENST00000368657 SYN1P17600 705 aa13.72□□□□□ -0.21
TUBE1-201ENST00000368657 ANKLE1Q8NAG6 615 aa13.72□□□□□ -0.21
TUBE1-201ENST00000368657 DEFB118Q96PH6 123 aa13.72□□□□□ -0.21
TUBE1-201ENST00000368657 CRISPLD2Q9H0B8 497 aa13.72□□□□□ -0.21
TUBE1-201ENST00000368657 MIS18AQ9NYP9 233 aa13.72□□□□□ -0.21
TUBE1-201ENST00000368657 FARP1Q9Y4F1 1045 aaPredicted RBP13.72□□□□□ -0.21
TUBE1-201ENST00000368657 CETPP11597 493 aa13.71□□□□□ -0.21
TUBE1-201ENST00000368657 ATP2B4P23634 1241 aa13.71□□□□□ -0.21
TUBE1-201ENST00000368657 TRIM26Q12899 539 aaPredicted RBP13.71□□□□□ -0.21
TUBE1-201ENST00000368657 NBPF12Q5TAG4 269 aaPredicted RBP13.71□□□□□ -0.21
TUBE1-201ENST00000368657 MXD3Q9BW11 206 aa13.71□□□□□ -0.21
TUBE1-201ENST00000368657 SEMA6BQ9H3T3 888 aa13.71□□□□□ -0.21
TUBE1-201ENST00000368657 ZNF804BA4D1E1 1349 aa13.7□□□□□ -0.22
TUBE1-201ENST00000368657 CTGFP29279 349 aa13.7□□□□□ -0.22
TUBE1-201ENST00000368657 EIF4A1P60842 406 aaKnown RBP13.7□□□□□ -0.22
TUBE1-201ENST00000368657 DLGAP5Q15398 846 aa13.7□□□□□ -0.22
TUBE1-201ENST00000368657 C1QTNF1Q9BXJ1 281 aa13.7□□□□□ -0.22
TUBE1-201ENST00000368657 ZSWIM8A7E2V4 1837 aa13.69□□□□□ -0.22
TUBE1-201ENST00000368657 XDHP47989 1333 aa13.69□□□□□ -0.22
TUBE1-201ENST00000368657 ALPK3Q96L96 1907 aa13.69□□□□□ -0.22
TUBE1-201ENST00000368657 MYO1BO43795 1136 aa13.69□□□□□ -0.22
TUBE1-201ENST00000368657 PRKAR2BP31323 418 aa13.69□□□□□ -0.22
TUBE1-201ENST00000368657 LRP10Q7Z4F1 713 aa13.69□□□□□ -0.22
TUBE1-201ENST00000368657 MTMR14Q8NCE2 650 aa13.69□□□□□ -0.22
TUBE1-201ENST00000368657 NBPF3Q9H094 633 aa13.69□□□□□ -0.22
TUBE1-201ENST00000368657 PAK6Q9NQU5 681 aaPredicted RBP13.69□□□□□ -0.22
TUBE1-201ENST00000368657 ADGRA2Q96PE1 1338 aa13.68□□□□□ -0.22
TUBE1-201ENST00000368657 BTBD19C9JJ37 291 aa13.68□□□□□ -0.22
TUBE1-201ENST00000368657 ADCY3O60266 1144 aa13.68□□□□□ -0.22
TUBE1-201ENST00000368657 DCTN1Q14203 1278 aa13.68□□□□□ -0.22
TUBE1-201ENST00000368657 TTLL5Q6EMB2 1281 aa13.68□□□□□ -0.22
TUBE1-201ENST00000368657 PXYLP1Q8TE99 480 aa13.68□□□□□ -0.22
TUBE1-201ENST00000368657 FBXW7Q969H0 707 aa13.68□□□□□ -0.22
TUBE1-201ENST00000368657 THUMPD2Q9BTF0 503 aaKnown RBP13.68□□□□□ -0.22
TUBE1-201ENST00000368657 LAMA2P24043 3122 aaKnown RBP13.67□□□□□ -0.22
TUBE1-201ENST00000368657 C19orf67A6NJJ6 358 aa13.67□□□□□ -0.22
TUBE1-201ENST00000368657 MAP3K9P80192 1104 aa13.67□□□□□ -0.22
TUBE1-201ENST00000368657 PRKCZQ05513 592 aa13.67□□□□□ -0.22
TUBE1-201ENST00000368657 PDIA6Q15084 440 aa13.67□□□□□ -0.22
TUBE1-201ENST00000368657 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.67□□□□□ -0.22
TUBE1-201ENST00000368657 KIAA0825Q8IV33 1275 aa13.67□□□□□ -0.22
TUBE1-201ENST00000368657 FAM89AQ96GI7 184 aa13.67□□□□□ -0.22
TUBE1-201ENST00000368657 COA1Q9GZY4 146 aa13.67□□□□□ -0.22
TUBE1-201ENST00000368657 CPA4Q9UI42 421 aa13.67□□□□□ -0.22
TUBE1-201ENST00000368657 HCN4Q9Y3Q4 1203 aa13.67□□□□□ -0.22
TUBE1-201ENST00000368657 COL2A1P02458 1487 aaPredicted RBP13.67□□□□□ -0.22
TUBE1-201ENST00000368657 FOSL2P15408 326 aa13.66□□□□□ -0.22
TUBE1-201ENST00000368657 FCGRTP55899 365 aa13.66□□□□□ -0.22
TUBE1-201ENST00000368657 AMER1Q5JTC6 1135 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms